Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu020560.2 Olea europaea HOM05D006065 ORTHO05D007672 1.4e-114 416.4 221 100.0
Oeu010611.1 Olea europaea HOM05D006065 ORTHO05D007672 3.8e-48 195.7 223 58.3
MSTRG.4858 Avicennia marina HOM05D006065 ORTHO05D007672 6.6e-24 115.2 207 41.1
Migut.N01441 Erythranthe guttata HOM05D006065 ORTHO05D007672 5.6e-23 112.1 219 37.0
Haze_15490 Corylus avellana HOM05D006065 ORTHO05D007672 1.6e-22 110.5 205 42.0
SGA_v2.0_scaffold11G05664 Striga asiatica HOM05D006065 ORTHO05D007672 1.2e-20 104.4 207 39.6
Hma1.2p1_0001F.1_g001420 Hydrangea macrophylla HOM05D006065 ORTHO05D007672 2.9e-19 99.8 222 39.6
SalBow3G2602 Salvia bowleyana HOM05D006065 ORTHO05D007672 1.4e-18 97.4 200 36.0
Rhsim07G0016100 Rhododendron simsii HOM05D006065 ORTHO05D007672 3.2e-18 96.3 222 37.4
Atru.chr5.461 Acer truncatum HOM05D006065 ORTHO05D007672 5.4e-18 95.5 204 37.7
Dinv43807 Davidia involucrata HOM05D006065 ORTHO05D007672 5.4e-18 95.5 221 36.7
CiPaw.01G060100 Carya illinoinensis HOM05D006065 ORTHO05D007672 3.5e-17 92.8 215 34.9
Cc02_g37900 Coffea canephora HOM05D006065 ORTHO05D007672 4.6e-17 92.4 187 38.0
TAR629G3005 Trochodendron aralioides HOM05D006065 ORTHO05D007672 7.8e-17 91.7 198 37.4
MSTRG.28221 Avicennia marina HOM05D006065 ORTHO05D007672 1.0e-16 91.3 211 35.1
Dinv32472 Davidia involucrata HOM05D006065 ORTHO05D007672 1.0e-16 91.3 207 39.6
Actinidia10016 Actinidia chinensis HOM05D006065 ORTHO05D007672 3.0e-16 89.7 202 35.1
QL08p049008 Quercus lobata HOM05D006065 ORTHO05D007672 5.1e-16 89.0 201 36.8
Cfa003936 Carpinus fangiana HOM05D006065 ORTHO05D007672 6.6e-16 88.6 205 36.1
Sabra14G0060500 Salix brachista HOM05D006065 ORTHO05D007672 1.1e-15 87.8 190 36.8
Ciclev10022632m.g Citrus clementina HOM05D006065 ORTHO05D007672 5.6e-15 85.5 204 35.8
Potri.014G083100 Populus trichocarpa HOM05D006065 ORTHO05D007672 5.6e-15 85.5 204 35.8
SGA_v2.0_scaffold43G16421 Striga asiatica HOM05D006065 ORTHO05D007672 1.2e-14 84.3 221 33.5
unitig_8.g3395 Utricularia gibba HOM05D006065 ORTHO05D007672 1.6e-14 84.0 204 32.8
Actinidia20914 Actinidia chinensis HOM05D006065 ORTHO05D007672 2.1e-14 83.6 200 35.5
CANSAT56G3634 Cannabis sativa HOM05D006065 ORTHO05D007672 2.8e-14 83.2 204 34.3
PGSC0003DMG400000036 Solanum tuberosum HOM05D006065 ORTHO05D007672 6.2e-14 82.0 204 32.4
DCAR_006926 Daucus carota HOM05D006065 ORTHO05D007672 8.1e-14 81.6 209 34.4
Nitab4.5_0008002g0050 Nicotiana tabacum HOM05D006065 ORTHO05D007672 8.1e-14 81.6 69 59.4
Peaxi162Scf00020g00240 Petunia axillaris HOM05D006065 ORTHO05D007672 8.1e-14 81.6 193 32.6
Sabra02G0126300 Salix brachista HOM05D006065 ORTHO05D007672 8.1e-14 81.6 190 35.8
vmacro13279 Vaccinium macrocarpon HOM05D006065 ORTHO05D007672 1.4e-13 80.9 208 36.1
CAN.G78.55 Capsicum annuum HOM05D006065 ORTHO05D007672 6.8e-13 78.6 198 34.3
MBI18_g21561_MAGBIO Magnolia biondii HOM05D006065 ORTHO05D007672 8.9e-13 78.2 201 31.3
Cpa.g.sc18.247 Carica papaya HOM05D006065 ORTHO05D007672 1.5e-12 77.4 200 32.5
Gohir.A08G131000 Gossypium hirsutum HOM05D006065 ORTHO05D007672 2.6e-12 76.6 200 31.5
PGSC0003DMG400021646 Solanum tuberosum HOM05D006065 ORTHO05D007672 2.6e-12 76.6 87 50.6
Sopen01g038320 Solanum pennellii HOM05D006065 ORTHO05D007672 5.8e-12 75.5 204 31.4
Solyc05g049940.3 Solanum lycopersicum HOM05D006065 ORTHO05D007672 7.6e-12 75.1 68 61.8
TAR374G1295 Trochodendron aralioides HOM05D006065 ORTHO05D007672 7.6e-12 75.1 203 30.5
Manes.05G035300 Manihot esculenta HOM05D006065 ORTHO05D007672 9.9e-12 74.7 217 31.8
COL.COLO4_12704 Corchorus olitorius HOM05D006065 ORTHO05D007672 1.7e-11 73.9 200 30.5
Sopen05g028300 Solanum pennellii HOM05D006065 ORTHO05D007672 1.7e-11 73.9 62 62.9
TWI59G0879 Tripterygium wilfordii HOM05D006065 ORTHO05D007672 1.7e-11 73.9 199 35.2
CsaV3_3G008970 Cucumis sativus L. HOM05D006065 ORTHO05D007672 2.9e-11 73.2 204 32.8
Thecc.01G360200 Theobroma cacao HOM05D006065 ORTHO05D007672 2.9e-11 73.2 203 31.0
arahy.Tifrunner.gnm1.ann1.WJC6IK Arachis hypogaea HOM05D006065 ORTHO05D007672 3.8e-11 72.8 203 32.5
Glyma.18G230000 Glycine max HOM05D006065 ORTHO05D007672 6.4e-11 72.0 204 30.4
Gorai.004G158400 Gossypium raimondii HOM05D006065 ORTHO05D007672 6.4e-11 72.0 200 31.5
Nitab4.5_0005277g0010 Nicotiana tabacum HOM05D006065 ORTHO05D007672 6.4e-11 72.0 66 56.1
VMungo1383G0981 Vigna mungo HOM05D006065 ORTHO05D007672 6.4e-11 72.0 204 31.9
Hund16927 Selenicereus undatus HOM05D006065 ORTHO05D007672 8.4e-11 71.6 219 32.9
GSVIVG01018349001 Vitis vinifera HOM05D006065 ORTHO05D007672 1.1e-10 71.2 187 33.7
Prupe.2G168300 Prunus persica HOM05D006065 ORTHO05D007672 1.4e-10 70.9 200 30.5
CiPaw.02G030100 Carya illinoinensis HOM05D006065 ORTHO05D007672 1.9e-10 70.5 187 33.7
Nitab4.5_0001702g0100 Nicotiana tabacum HOM05D006065 ORTHO05D007672 1.9e-10 70.5 183 33.3
Lalb_Chr19g0127061 Lupinus albus HOM05D006065 ORTHO05D007672 4.1e-10 69.3 203 29.6
GSVIVG01026900001 Vitis vinifera HOM05D006065 ORTHO05D007672 5.4e-10 68.9 187 33.2
Gohir.D08G152500 Gossypium hirsutum HOM05D006065 ORTHO05D007672 1.2e-09 67.8 200 30.5
Glyma.09G262200 Glycine max HOM05D006065 ORTHO05D007672 1.6e-09 67.4 204 30.4
Lsat_1_v5_gn_7_4500 Lactuca sativa HOM05D006065 ORTHO05D007672 2.1e-09 67.0 211 30.8
Phvul.008G067900 Phaseolus vulgaris HOM05D006065 ORTHO05D007672 2.1e-09 67.0 204 30.4
Sc01g0003370 Simmondsia chinensis HOM05D006065 ORTHO05D007672 2.1e-09 67.0 201 31.8
Medtr7g076690 Medicago truncatula HOM05D006065 ORTHO05D007672 2.7e-09 66.6 204 29.9
Manes.01G258100 Manihot esculenta HOM05D006065 ORTHO05D007672 4.6e-09 65.9 192 31.8
ClCG05G001580 Citrullus lanatus HOM05D006065 ORTHO05D007672 6.0e-09 65.5 218 29.4
Sed0025321 Sechium edule HOM05D006065 ORTHO05D007672 6.0e-09 65.5 204 30.4
Duzib138G1923 Durio zibethinus HOM05D006065 ORTHO05D007672 7.8e-09 65.1 203 30.5
Lj1g0009386 Lotus japonicus HOM05D006065 ORTHO05D007672 1.0e-08 64.7 202 29.7
PGR031G0376 Punica granatum HOM05D006065 ORTHO05D007672 2.3e-08 63.5 203 29.6
TPR.G37820 Trifolium pratense HOM05D006065 ORTHO05D007672 2.3e-08 63.5 204 30.9
Duzib133G1075 Durio zibethinus HOM05D006065 ORTHO05D007672 5.1e-08 62.4 200 30.5
Sed0021596 Sechium edule HOM05D006065 ORTHO05D007672 5.1e-08 62.4 84 46.4
Gorai.007G098900 Gossypium raimondii HOM05D006065 ORTHO05D007672 1.5e-07 60.8 199 28.1
TWI14G0791 Tripterygium wilfordii HOM05D006065 ORTHO05D007672 1.5e-07 60.8 216 28.7
arahy.Tifrunner.gnm1.ann1.QD83TI Arachis hypogaea HOM05D006065 ORTHO05D007672 1.9e-07 60.5 203 28.6
Aqoxy7G00322 Aquilegia oxysepala HOM05D006065 ORTHO05D007672 2.5e-07 60.1 190 28.9
THA.LOC104817023 Tarenaya hassleriana HOM05D006065 ORTHO05D007672 3.3e-07 59.7 199 28.1
CSS0003041 Camellia sinensis var. sinensis HOM05D006065 ORTHO05D007672 7.3e-07 58.5 201 29.9
Oeu031712.2 Olea europaea HOM05D006065 ORTHO05D007672 7.3e-07 58.5 61 62.3
PSO832G3783 Papaver somniferum HOM05D006065 ORTHO05D007672 7.3e-07 58.5 193 30.6
RcHm_v2.0_Chr1g0355101 Rosa chinensis HOM05D006065 ORTHO05D007672 7.3e-07 58.5 200 27.5
Ca_07890_v3 Cicer arietinum L. HOM05D006065 ORTHO05D007672 9.6e-07 58.2 203 28.6
EL10Ac1g00426 Beta vulgaris HOM05D006065 ORTHO05D007672 1.2e-06 57.8 58 51.7
Ah.05g180670 Amaranthus hybridus HOM05D006065 ORTHO05D007672 1.6e-06 57.4 185 30.3
FAN01G0390 Fragaria x ananassa HOM05D006065 ORTHO05D007672 2.8e-06 56.6 192 27.6
PSO210G7571 Papaver somniferum HOM05D006065 ORTHO05D007672 2.8e-06 56.6 194 29.9
FAN10G0270 Fragaria x ananassa HOM05D006065 ORTHO05D007672 4.7e-06 55.8 191 28.3
FAN06G3027 Fragaria x ananassa HOM05D006065 ORTHO05D007672 6.2e-06 55.5 191 26.7
Aa31LG5G450 Aethionema arabicum HOM05D006065 ORTHO05D007672 8.1e-06 55.1 198 27.3
FvH4_7g14190 Fragaria vesca HOM05D006065 ORTHO05D007672 8.1e-06 55.1 191 26.7
FAN06G3847 Fragaria x ananassa HOM05D006065 ORTHO05D007672 8.1e-06 55.1 191 26.7


User provided reference genes

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