Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu020469.1 Olea europaea HOM05D001765 ORTHO05D003527 3.7e-39 164.5 86 100.0
TAR375G0793 Trochodendron aralioides HOM05D001765 ORTHO05D003527 1.3e-15 86.3 75 62.7
CiPaw.11G106600 Carya illinoinensis HOM05D001765 ORTHO05D003527 4.8e-15 84.3 72 63.9
Dinv12396 Davidia involucrata HOM05D001765 ORTHO05D003527 8.3e-15 83.6 71 67.6
CSS0000240 Camellia sinensis var. sinensis HOM05D001765 ORTHO05D003527 1.4e-14 82.8 75 64.0
Hma1.2p1_0436F.1_g152890 Hydrangea macrophylla HOM05D001765 ORTHO05D003527 1.8e-14 82.4 71 64.8
Thecc.03G214000 Theobroma cacao HOM05D001765 ORTHO05D003527 1.8e-14 82.4 75 62.7
Duzib084G1229 Durio zibethinus HOM05D001765 ORTHO05D003527 2.4e-14 82.0 75 62.7
Cpa.g.sc37.116 Carica papaya HOM05D001765 ORTHO05D003527 3.1e-14 81.6 75 62.7
Eucgr.D02536 Eucalyptus grandis HOM05D001765 ORTHO05D003527 3.1e-14 81.6 74 62.2
Nn1g00491 Nelumbo nucifera HOM05D001765 ORTHO05D003527 3.1e-14 81.6 75 61.3
Aqoxy5G04386 Aquilegia oxysepala HOM05D001765 ORTHO05D003527 4.1e-14 81.3 75 58.7
Actinidia22239 Actinidia chinensis HOM05D001765 ORTHO05D003527 7.0e-14 80.5 75 62.7
vmacro11471 Vaccinium macrocarpon HOM05D001765 ORTHO05D003527 7.0e-14 80.5 75 60.0
Haze_03593 Corylus avellana HOM05D001765 ORTHO05D003527 1.2e-13 79.7 75 58.7
TWI60G1724 Tripterygium wilfordii HOM05D001765 ORTHO05D003527 1.6e-13 79.3 75 60.0
Lj2A148G64 Lonicera japonica HOM05D001765 ORTHO05D003527 2.7e-13 78.6 75 57.3
QL02p026712 Quercus lobata HOM05D001765 ORTHO05D003527 2.7e-13 78.6 81 54.3
Nitab4.5_0006317g0030 Nicotiana tabacum HOM05D001765 ORTHO05D003527 4.5e-13 77.8 74 56.8
GSVIVG01019710001 Vitis vinifera HOM05D001765 ORTHO05D003527 1.0e-12 76.6 75 58.7
Ciclev10022684m.g Citrus clementina HOM05D001765 ORTHO05D003527 1.3e-12 76.3 75 58.7
Migut.E00773 Erythranthe guttata HOM05D001765 ORTHO05D003527 1.3e-12 76.3 75 57.3
QL93p2012_0004 Quercus lobata HOM05D001765 ORTHO05D003527 1.3e-12 76.3 75 56.0
QL93p2012_0027 Quercus lobata HOM05D001765 ORTHO05D003527 1.3e-12 76.3 75 56.0
Duzib068G1454 Durio zibethinus HOM05D001765 ORTHO05D003527 1.7e-12 75.9 74 59.5
Nitab4.5_0000450g0050 Nicotiana tabacum HOM05D001765 ORTHO05D003527 1.7e-12 75.9 74 55.4
Atru.chr9.1818 Acer truncatum HOM05D001765 ORTHO05D003527 2.9e-12 75.1 77 57.1
MSTRG.2000 Avicennia marina HOM05D001765 ORTHO05D003527 6.6e-12 73.9 76 57.9
SGA_v2.0_scaffold20G09260 Striga asiatica HOM05D001765 ORTHO05D003527 6.6e-12 73.9 76 57.9
PGR031G0625 Punica granatum HOM05D001765 ORTHO05D003527 1.5e-11 72.8 75 54.7
CANSAT21G2548 Cannabis sativa HOM05D001765 ORTHO05D003527 2.5e-11 72.0 75 50.7
Cfa010658 Carpinus fangiana HOM05D001765 ORTHO05D003527 2.5e-11 72.0 58 65.5
MBI04_g26129_MAGBIO Magnolia biondii HOM05D004143 ORTHO05D004816 2.5e-11 72.0 72 58.3
Gohir.D12G244600 Gossypium hirsutum HOM05D001765 ORTHO05D003527 3.3e-11 71.6 75 54.7
Gorai.008G262200 Gossypium raimondii HOM05D001765 ORTHO05D003527 3.3e-11 71.6 75 54.7
Manes.01G000550 Manihot esculenta HOM05D001765 ORTHO05D003527 5.5e-11 70.9 76 55.3
Cc08_g05160 Coffea canephora HOM05D001765 ORTHO05D003527 1.6e-10 69.3 74 51.4
Gohir.A12G243600 Gossypium hirsutum HOM05D001765 ORTHO05D003527 2.8e-10 68.6 75 53.3
Nn1g00490 Nelumbo nucifera HOM05D001765 ORTHO05D003527 6.1e-10 67.4 58 62.1
FvH4_5g10193 Fragaria vesca HOM05D001765 ORTHO05D003527 8.0e-10 67.0 76 51.3
EL10Ac9g22070 Beta vulgaris HOM05D001765 ORTHO05D003527 1.8e-09 65.9 72 56.9
COL.COLO4_10860 Corchorus olitorius HOM05D001765 ORTHO05D003527 1.8e-09 65.9 75 49.3
Prupe.5G136900 Prunus persica HOM05D001765 ORTHO05D003527 1.8e-09 65.9 75 48.0
Peaxi162Scf00779g00211 Petunia axillaris HOM05D001765 ORTHO05D003527 2.3e-09 65.5 70 47.1
RcHm_v2.0_Chr7g0188041 Rosa chinensis HOM05D001765 ORTHO05D003527 2.3e-09 65.5 75 48.0
unitig_52.g17201 Utricularia gibba HOM05D000742 ORTHO05D000924 3.0e-09 65.1 54 59.3
Potri.001G453400 Populus trichocarpa HOM05D001765 ORTHO05D003527 4.0e-09 64.7 75 56.0
SalBow1G2231 Salvia bowleyana HOM05D001765 ORTHO05D003527 4.0e-09 64.7 72 52.8
ClCG01G001250 Citrullus lanatus HOM05D001765 ORTHO05D003527 5.2e-09 64.3 67 52.2
FAN04G1154 Fragaria x ananassa HOM05D000258 ORTHO05D000153 5.2e-09 64.3 75 49.3
FAN18G1217 Fragaria x ananassa HOM05D001765 ORTHO05D003527 6.8e-09 63.9 76 50.0
Sabra16G0306500 Salix brachista HOM05D001765 ORTHO05D003527 6.8e-09 63.9 75 56.0
Carub.0002s2071 Capsella rubella HOM05D001765 ORTHO05D003527 8.9e-09 63.5 54 57.4
FAN13G1501 Fragaria x ananassa HOM05D000258 ORTHO05D000153 8.9e-09 63.5 74 51.4
Sed0027749 Sechium edule HOM05D001765 ORTHO05D003527 8.9e-09 63.5 77 45.5
THA.LOC104823621 Tarenaya hassleriana HOM05D001765 ORTHO05D003527 1.2e-08 63.2 76 51.3
Sp5g29140 Schrenkiella parvula HOM05D001765 ORTHO05D003527 2.6e-08 62.0 61 50.8
BcaB03g15737 Brassica carinata HOM05D001765 ORTHO05D003527 3.4e-08 61.6 51 56.9
PSO063G6238 Papaver somniferum HOM05D001765 ORTHO05D003527 7.5e-08 60.5 70 44.3
HPP92_020738 Vanilla planifolia HOM05D001765 ORTHO05D003527 7.5e-08 60.5 80 50.0
AT1G73940 Arabidopsis thaliana HOM05D001765 ORTHO05D003527 9.8e-08 60.1 70 44.3
CsaV3_5G001370 Cucumis sativus L. HOM05D001765 ORTHO05D003527 9.8e-08 60.1 75 42.7
Thhalv10019277m.g Eutrema salsugineum HOM05D001765 ORTHO05D003527 9.8e-08 60.1 50 60.0
MD06G1126400 Malus domestica HOM05D001765 ORTHO05D003527 9.8e-08 60.1 73 47.9
Aa31LG4G4230 Aethionema arabicum HOM05D001765 ORTHO05D003527 1.3e-07 59.7 51 56.9
AUR62027108 Chenopodium quinoa HOM05D001765 ORTHO05D003527 1.3e-07 59.7 70 50.0
PSO782G3477 Papaver somniferum HOM05D001765 ORTHO05D003527 1.7e-07 59.3 70 42.9
AL2G33770 Arabidopsis lyrata HOM05D001765 ORTHO05D003527 2.2e-07 58.9 60 50.0
AUR62012884 Chenopodium quinoa HOM05D001765 ORTHO05D003527 2.2e-07 58.9 70 48.6
Sed0026089 Sechium edule HOM05D001765 ORTHO05D003527 2.2e-07 58.9 72 45.8
C06p48050 Brassica napus HOM05D001765 ORTHO05D003527 3.7e-07 58.2 49 57.1
BolC6t39840H Brassica oleracea HOM05D001765 ORTHO05D003527 3.7e-07 58.2 49 57.1
MELO3C005810.2 Cucumis melo HOM05D001765 ORTHO05D003527 3.7e-07 58.2 75 41.3
CARHR067050 Cardamine hirsuta HOM05D001765 ORTHO05D003527 4.9e-07 57.8 50 52.0
ATR0579G141 Amborella trichopoda HOM05D001765 ORTHO05D003527 6.3e-07 57.4 79 44.3
Ah.01g023930 Amaranthus hybridus HOM05D001765 ORTHO05D003527 1.4e-06 56.2 75 46.7
CDE11G1166 Ceratophyllum demersum HOM05D001765 ORTHO05D003527 1.4e-06 56.2 65 55.4
CDE09G1369 Ceratophyllum demersum HOM05D001765 ORTHO05D003527 1.8e-06 55.8 60 55.0
Hund00380 Selenicereus undatus HOM05D001765 ORTHO05D003527 4.1e-06 54.7 72 48.6
A07p39780 Brassica napus HOM05D001765 ORTHO05D003527 5.4e-06 54.3 40 65.0
BraA07t31525Z Brassica rapa HOM05D001765 ORTHO05D003527 5.4e-06 54.3 40 65.0
C06p33710 Brassica napus HOM05D001765 ORTHO05D003527 7.0e-06 53.9 49 53.1


User provided reference genes

Program Settings