Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu020467.1 Olea europaea HOM05D006840 ORTHO05D008588 1.5e-124 449.5 227 100.0
MSTRG.27397 Avicennia marina HOM05D006840 ORTHO05D008588 3.5e-105 385.2 227 82.4
GSVIVG01019072001 Vitis vinifera HOM05D006840 ORTHO05D008588 3.5e-105 385.2 227 84.1
Migut.F02113 Erythranthe guttata HOM05D006840 ORTHO05D008588 6.0e-105 384.4 227 81.5
Peaxi162Scf00529g00710 Petunia axillaris HOM05D006840 ORTHO05D008588 1.3e-104 383.3 227 81.9
Gohir.D08G247000 Gossypium hirsutum HOM05D006840 ORTHO05D008588 3.0e-104 382.1 227 82.4
Gohir.A08G226600 Gossypium hirsutum HOM05D006840 ORTHO05D008588 1.1e-103 380.2 227 81.5
EL10Ac4g09995 Beta vulgaris HOM05D006840 ORTHO05D008588 1.5e-103 379.8 227 81.9
CiPaw.08G114500 Carya illinoinensis HOM05D006840 ORTHO05D008588 3.3e-103 378.6 227 81.9
Eucgr.B01421 Eucalyptus grandis HOM05D006840 ORTHO05D008588 5.6e-103 377.9 227 81.1
CSS0048734 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 1.2e-102 376.7 227 81.9
Rhsim06G0181200 Rhododendron simsii HOM05D006840 ORTHO05D008588 1.2e-102 376.7 227 81.5
Atru.BG.274.p Acer truncatum HOM05D006840 ORTHO05D008588 2.1e-102 375.9 226 80.5
SGA_v2.0_scaffold62G21495 Striga asiatica HOM05D006840 ORTHO05D008588 2.1e-102 375.9 227 79.3
Manes.13G004800 Manihot esculenta HOM05D006840 ORTHO05D008588 6.2e-102 374.4 227 80.2
QL01p049413 Quercus lobata HOM05D006840 ORTHO05D008588 6.2e-102 374.4 226 81.4
AUR62000298 Chenopodium quinoa HOM05D006840 ORTHO05D008588 8.1e-102 374.0 227 81.9
Potri.013G085300 Populus trichocarpa HOM05D006840 ORTHO05D008588 1.8e-101 372.9 227 80.2
Duzib106G1767 Durio zibethinus HOM05D006840 ORTHO05D008588 2.4e-101 372.5 227 79.3
CSS0032443 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 4.0e-101 371.7 225 81.8
AUR62006644 Chenopodium quinoa HOM05D006840 ORTHO05D008588 4.0e-101 371.7 227 80.6
Lj1A575G23 Lonicera japonica HOM05D006840 ORTHO05D008588 5.2e-101 371.3 227 79.7
Nitab4.5_0000083g0050 Nicotiana tabacum HOM05D006840 ORTHO05D008588 5.2e-101 371.3 227 79.3
PGSC0003DMG400010521 Solanum tuberosum HOM05D006840 ORTHO05D008588 8.9e-101 370.5 227 79.3
Sabra13G0078300 Salix brachista HOM05D006840 ORTHO05D008588 2.0e-100 369.4 227 78.9
PGR119G2059 Punica granatum HOM05D006840 ORTHO05D008588 3.4e-100 368.6 227 78.4
Solyc04g056580.3 Solanum lycopersicum HOM05D006840 ORTHO05D008588 3.4e-100 368.6 227 79.3
Gorai.004G263500 Gossypium raimondii HOM05D006840 ORTHO05D008588 9.9e-100 367.1 252 73.8
Sopen04g025500 Solanum pennellii HOM05D006840 ORTHO05D008588 1.7e-99 366.3 227 79.3
Nitab4.5_0009290g0020 Nicotiana tabacum HOM05D006840 ORTHO05D008588 2.9e-99 365.5 238 76.5
CAN.G642.5 Capsicum annuum HOM05D006840 ORTHO05D008588 3.8e-99 365.2 227 77.5
Glyma.18G243000 Glycine max HOM05D006840 ORTHO05D008588 1.4e-98 363.2 227 79.3
Phvul.008G053500 Phaseolus vulgaris HOM05D006840 ORTHO05D008588 2.4e-98 362.5 227 77.5
Lsat_1_v5_gn_0_18400 Lactuca sativa HOM05D006840 ORTHO05D008588 3.2e-98 362.1 227 77.1
ECA232G2794 Erigeron canadensis HOM05D006840 ORTHO05D008588 4.2e-98 361.7 227 76.2
Glyma.09G249400 Glycine max HOM05D006840 ORTHO05D008588 4.2e-98 361.7 227 78.9
Lj1g0027213 Lotus japonicus HOM05D006840 ORTHO05D008588 4.2e-98 361.7 227 76.2
arahy.Tifrunner.gnm1.ann1.SXK3FV Arachis hypogaea HOM05D006840 ORTHO05D008588 7.1e-98 360.9 227 78.0
Prupe.6G362300 Prunus persica HOM05D006840 ORTHO05D008588 7.1e-98 360.9 227 76.7
HanXRQChr15g0492181 Helianthus annuus HOM05D006840 ORTHO05D008588 1.2e-97 360.1 227 77.1
CsaV3_1G044150 Cucumis sativus L. HOM05D006840 ORTHO05D008588 1.6e-97 359.8 227 75.3
Cc09_g03780 Coffea canephora HOM05D006840 ORTHO05D008588 2.1e-97 359.4 227 78.9
CANSAT54G1191 Cannabis sativa HOM05D006840 ORTHO05D008588 4.6e-97 358.2 227 75.8
SalBow1G4059 Salvia bowleyana HOM05D006840 ORTHO05D008588 6.0e-97 357.8 215 78.1
vmacro12041 Vaccinium macrocarpon HOM05D006840 ORTHO05D008588 1.0e-96 357.1 239 75.3
MELO3C010008.2 Cucumis melo HOM05D006840 ORTHO05D008588 1.7e-96 356.3 227 74.9
DCAR_028385 Daucus carota HOM05D006840 ORTHO05D008588 2.3e-96 355.9 242 74.8
TWI36G0520 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 2.3e-96 355.9 227 76.2
RcHm_v2.0_Chr3g0447741 Rosa chinensis HOM05D006840 ORTHO05D008588 3.9e-96 355.1 227 76.7
TWI75G0198 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 8.7e-96 354.0 227 76.7
TPR.G23771 Trifolium pratense HOM05D006840 ORTHO05D008588 1.9e-95 352.8 227 76.2
MD04G1245900 Malus domestica HOM05D006840 ORTHO05D008588 3.3e-95 352.1 227 76.2
PSO357G0633 Papaver somniferum HOM05D006840 ORTHO05D008588 3.3e-95 352.1 227 76.7
Sed0002286 Sechium edule HOM05D006840 ORTHO05D008588 3.3e-95 352.1 227 73.6
Sc06g0005020 Simmondsia chinensis HOM05D006840 ORTHO05D008588 3.3e-95 352.1 228 77.2
HanXRQChr15g0491491 Helianthus annuus HOM05D006840 ORTHO05D008588 4.3e-95 351.7 227 74.9
MD12G1264100 Malus domestica HOM05D006840 ORTHO05D008588 1.6e-94 349.7 227 74.9
PSO170G0121 Papaver somniferum HOM05D006840 ORTHO05D008588 1.6e-94 349.7 227 75.8
FvH4_6g00410 Fragaria vesca HOM05D006840 ORTHO05D008588 1.4e-93 346.7 228 74.1
VMungo1383G2163 Vigna mungo HOM05D006840 ORTHO05D008588 1.4e-93 346.7 227 75.8
FAN09G3232 Fragaria x ananassa HOM05D006840 ORTHO05D008588 5.3e-93 344.7 228 73.7
Psat3g102720 Pisum sativum HOM05D006840 ORTHO05D008588 6.9e-93 344.4 227 75.3
Hund21908 Selenicereus undatus HOM05D006840 ORTHO05D008588 9.0e-93 344.0 259 68.0
ClCG03G011690 Citrullus lanatus HOM05D006840 ORTHO05D008588 1.5e-92 343.2 250 68.0
ATR0215G001 Amborella trichopoda HOM05D006840 ORTHO05D008588 3.4e-92 342.0 218 74.3
arahy.Tifrunner.gnm1.ann1.1ED5VS Arachis hypogaea HOM05D006840 ORTHO05D008588 3.4e-92 342.0 227 74.9
Lalb_Chr03g0038681 Lupinus albus HOM05D006840 ORTHO05D008588 3.4e-92 342.0 227 74.9
AL2G20230 Arabidopsis lyrata HOM05D006840 ORTHO05D008588 2.9e-91 339.0 227 73.1
AT1G65230 Arabidopsis thaliana HOM05D006840 ORTHO05D008588 3.2e-90 335.5 227 72.2
Carub.0002s1076 Capsella rubella HOM05D006840 ORTHO05D008588 3.2e-90 335.5 227 71.8
HPP92_000447 Vanilla planifolia HOM05D006840 ORTHO05D008588 4.2e-90 335.1 228 71.9
Medtr7g080220 Medicago truncatula HOM05D006840 ORTHO05D008588 7.1e-90 334.3 228 73.7
THA.LOC104821923 Tarenaya hassleriana HOM05D006840 ORTHO05D008588 3.5e-89 332.0 227 72.2
Dinv29090 Davidia involucrata HOM05D006840 ORTHO05D008588 4.6e-89 331.6 195 83.6
Aa31LG2G2360 Aethionema arabicum HOM05D006840 ORTHO05D008588 6.0e-89 331.3 227 71.8
Os01g0912700 Oryza sativa ssp. japonica HOM05D006840 ORTHO05D008588 7.8e-89 330.9 230 72.6
BcaC03g14685 Brassica carinata HOM05D006840 ORTHO05D008588 3.9e-88 328.6 227 70.0
Thhalv10018969m.g Eutrema salsugineum HOM05D006840 ORTHO05D008588 3.9e-88 328.6 227 71.4
A02p13110 Brassica napus HOM05D006840 ORTHO05D008588 6.6e-88 327.8 227 70.0
BraA02t06367Z Brassica rapa HOM05D006840 ORTHO05D008588 6.6e-88 327.8 227 70.0
CARHR056840 Cardamine hirsuta HOM05D006840 ORTHO05D008588 6.6e-88 327.8 228 71.1
C02p21250 Brassica napus HOM05D006840 ORTHO05D008588 1.9e-87 326.2 227 70.0
BcaB05g24097 Brassica carinata HOM05D006840 ORTHO05D008588 2.5e-87 325.9 227 69.2
BolC2t08265H Brassica oleracea HOM05D006840 ORTHO05D008588 5.6e-87 324.7 227 69.2
Aqoxy5G00025 Aquilegia oxysepala HOM05D006840 ORTHO05D008588 1.4e-85 320.1 193 80.3
Nn7g37259 Nelumbo nucifera HOM05D006840 ORTHO05D008588 1.4e-85 320.1 227 71.4
Cfa006254 Carpinus fangiana HOM05D006840 ORTHO05D008588 1.8e-85 319.7 196 78.1
Thecc.05G192600 Theobroma cacao HOM05D006840 ORTHO05D008588 2.6e-84 315.8 195 76.9
Sp5g19910 Schrenkiella parvula HOM05D006840 ORTHO05D008588 8.4e-83 310.8 227 68.7
Ciclev10013335m.g Citrus clementina HOM05D006840 ORTHO05D008588 9.3e-82 307.4 227 69.2
Haze_04572 Corylus avellana HOM05D006840 ORTHO05D008588 9.3e-82 307.4 188 79.3
Zm00001eb365000 Zea mays HOM05D006840 ORTHO05D008588 4.6e-81 305.1 231 67.1
FAN02G1048 Fragaria x ananassa HOM05D006840 ORTHO05D008588 2.1e-78 296.2 197 72.6
FAN05G5535 Fragaria x ananassa HOM05D006840 ORTHO05D008588 4.8e-78 295.0 197 72.1
FAN14G4782 Fragaria x ananassa HOM05D006840 ORTHO05D008588 4.0e-77 292.0 197 72.1
CDE02G0188 Ceratophyllum demersum HOM05D006840 ORTHO05D008588 6.9e-77 291.2 193 72.0
Lj1A595G27 Lonicera japonica HOM05D006840 ORTHO05D008588 1.5e-76 290.0 255 61.2
Actinidia31085 Actinidia chinensis HOM05D006840 ORTHO05D008588 3.4e-76 288.9 179 79.9
Ca_07995_v3 Cicer arietinum L. HOM05D006840 ORTHO05D008588 2.2e-75 286.2 193 72.0
Cpa.g.sc39.39 Carica papaya HOM05D006840 ORTHO05D008588 7.1e-74 281.2 227 64.3
unitig_22.g5732 Utricularia gibba HOM05D006840 ORTHO05D008588 1.6e-73 280.0 229 62.4
Pp3c9_3810 Physcomitrium patens HOM05D006840 ORTHO05D008588 2.3e-72 276.2 228 57.9
SMO353G0271 Selaginella moellendorffii HOM05D006840 ORTHO05D008588 8.2e-70 267.7 228 60.1
Mapoly0031s0189 Marchantia polymorpha HOM05D006840 ORTHO05D008588 2.9e-67 259.2 228 56.1
MBI19_g03256_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 1.9e-66 256.5 197 66.5
MBI07_g00615_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 4.5e-60 235.3 148 79.7
AagrBONN_evm.TU.Sc2ySwM_228.2548 Anthoceros agrestis HOM05D006840 ORTHO05D008588 5.0e-59 231.9 231 53.7
Pp3c15_10950 Physcomitrium patens HOM05D006840 ORTHO05D008588 2.5e-58 229.6 196 56.6
SEGI_09257 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 5.5e-58 228.4 209 58.9
CBR_g8822 Chara braunii HOM05D006840 ORTHO05D008588 1.4e-48 197.2 196 52.6
MCO02G353 Micromonas commoda HOM05D006840 ORTHO05D008588 1.6e-28 130.6 222 36.0
Actinidia34706 Actinidia chinensis HOM05D006840 ORTHO05D008588 7.2e-26 121.7 122 56.6
Cre12.g536800 Chlamydomonas reinhardtii HOM05D006840 ORTHO05D008588 1.1e-18 97.8 225 31.6
SEGI_35940 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 2.5e-18 96.7 58 79.3
PRCOL_00007103 Prasinoderma coloniale HOM05D006840 ORTHO05D008588 3.0e-11 73.2 230 27.8
Zm00001eb424130 Zea mays HOM05D006840 ORTHO05D008588 3.9e-11 72.8 51 64.7
Zm00001eb424170 Zea mays HOM05D006840 ORTHO05D008588 3.9e-11 72.8 51 64.7


User provided reference genes

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