Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu020438.1 Olea europaea HOM05D003822 ORTHO05D004484 1.2e-94 350.1 224 100.0
TAR633G2284 Trochodendron aralioides HOM05D003822 ORTHO05D004484 1.8e-61 240.0 201 81.1
Hma1.2p1_0635F.1_g193140 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 3.1e-61 239.2 216 72.2
Oeu013421.2 Olea europaea HOM05D003822 ORTHO05D004484 3.2e-58 229.2 212 77.4
Gorai.007G162100 Gossypium raimondii HOM05D003822 ORTHO05D004484 1.2e-57 227.3 206 69.4
Gohir.D11G153200 Gossypium hirsutum HOM05D003822 ORTHO05D004484 3.5e-57 225.7 206 68.9
VMungo1080G0920 Vigna mungo HOM05D003822 ORTHO05D004484 4.6e-57 225.3 209 73.2
Hma1.2p1_2403F.1_g321420 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 7.8e-57 224.6 215 71.2
Peaxi162Scf00995g00322 Petunia axillaris HOM05D003822 ORTHO05D004484 7.8e-57 224.6 206 73.3
QL10p052081 Quercus lobata HOM05D003822 ORTHO05D004484 7.8e-57 224.6 208 76.0
MSTRG.17947 Avicennia marina HOM05D003822 ORTHO05D004484 1.3e-56 223.8 204 73.5
Gohir.A11G145000 Gossypium hirsutum HOM05D003822 ORTHO05D004484 6.6e-56 221.5 205 66.3
Manes.13G057600 Manihot esculenta HOM05D003822 ORTHO05D004484 1.1e-55 220.7 202 74.3
SGA_v2.0_scaffold77G25327 Striga asiatica HOM05D003822 ORTHO05D004484 1.5e-55 220.3 206 71.4
COL.COLO4_29926 Corchorus olitorius HOM05D003822 ORTHO05D004484 1.9e-55 219.9 214 67.3
TWI36G1391 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 1.9e-55 219.9 202 68.3
TWI36G1709 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 1.9e-55 219.9 202 68.3
TPR.G6564 Trifolium pratense HOM05D003822 ORTHO05D004484 1.6e-54 216.9 213 65.7
Thecc.01G205200 Theobroma cacao HOM05D003822 ORTHO05D004484 8.1e-54 214.5 203 72.4
CSS0006211 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 1.1e-53 214.2 204 66.7
Glyma.15G027800 Glycine max HOM05D003822 ORTHO05D004484 1.1e-53 214.2 210 71.0
vmacro14674 Vaccinium macrocarpon HOM05D003822 ORTHO05D004484 1.1e-53 214.2 211 68.2
Cc02_g30690 Coffea canephora HOM05D003822 ORTHO05D004484 1.4e-53 213.8 214 70.1
Nn1g09539 Nelumbo nucifera HOM05D003822 ORTHO05D004484 2.4e-53 213.0 206 72.8
Nitab4.5_0002641g0020 Nicotiana tabacum HOM05D003822 ORTHO05D004484 2.4e-53 213.0 146 71.9
Glyma.13G346400 Glycine max HOM05D003822 ORTHO05D004484 4.0e-53 212.2 214 69.2
Ciclev10016105m.g Citrus clementina HOM05D003822 ORTHO05D004484 5.2e-53 211.8 136 76.5
Ca_01239_v3 Cicer arietinum L. HOM05D003822 ORTHO05D004484 8.9e-53 211.1 210 73.3
Sc19g0002790 Simmondsia chinensis HOM05D003822 ORTHO05D004484 1.2e-52 210.7 204 72.1
ECA248G1190 Erigeron canadensis HOM05D002050 ORTHO05D001949 2.6e-52 209.5 198 59.6
Nn7g37555 Nelumbo nucifera HOM05D003822 ORTHO05D004484 2.6e-52 209.5 206 66.5
Actinidia34522 Actinidia chinensis HOM05D003822 ORTHO05D004484 3.4e-52 209.1 138 74.6
arahy.Tifrunner.gnm1.ann1.0NAL6S Arachis hypogaea HOM05D003822 ORTHO05D004484 3.4e-52 209.1 129 78.3
arahy.Tifrunner.gnm1.ann1.1KAH27 Arachis hypogaea HOM05D003822 ORTHO05D004484 3.4e-52 209.1 129 78.3
Duzib133G0954 Durio zibethinus HOM05D003822 ORTHO05D004484 3.4e-52 209.1 127 78.0
Eucgr.A00039 Eucalyptus grandis HOM05D003822 ORTHO05D004484 4.4e-52 208.8 205 65.4
Eucgr.H00681 Eucalyptus grandis HOM05D003822 ORTHO05D004484 4.4e-52 208.8 216 71.3
Nitab4.5_0003952g0050 Nicotiana tabacum HOM05D003822 ORTHO05D004484 4.4e-52 208.8 147 70.7
Prupe.1G200400 Prunus persica HOM05D003822 ORTHO05D004484 4.4e-52 208.8 215 67.4
Glyma.11G125400 Glycine max HOM05D003822 ORTHO05D004484 7.6e-52 208.0 209 65.6
Ciclev10021425m.g Citrus clementina HOM05D003822 ORTHO05D004484 9.9e-52 207.6 202 77.2
Dinv28779 Davidia involucrata HOM05D003822 ORTHO05D004484 1.3e-51 207.2 120 83.3
ECA236G4570 Erigeron canadensis HOM05D003822 ORTHO05D004484 2.2e-51 206.5 133 77.4
unitig_22.g5196 Utricularia gibba HOM05D003822 ORTHO05D004484 3.8e-51 205.7 201 70.1
VMungo1127G1572 Vigna mungo HOM05D003822 ORTHO05D004484 3.8e-51 205.7 216 61.6
Manes.12G058903 Manihot esculenta HOM05D003822 ORTHO05D004484 4.9e-51 205.3 124 77.4
Duzib211G0255 Durio zibethinus HOM05D003822 ORTHO05D004484 6.4e-51 204.9 129 76.0
HanXRQChr10g0281191 Helianthus annuus HOM05D003822 ORTHO05D004484 8.4e-51 204.5 134 77.6
Manes.12G057507 Manihot esculenta HOM05D003822 ORTHO05D004484 1.1e-50 204.1 123 77.2
Manes.12G057905 Manihot esculenta HOM05D003822 ORTHO05D004484 1.1e-50 204.1 123 77.2
THA.LOC104819024 Tarenaya hassleriana HOM05D003822 ORTHO05D004484 1.1e-50 204.1 143 72.7
Potri.014G197200 Populus trichocarpa HOM05D003822 ORTHO05D004484 1.4e-50 203.8 132 75.0
TWI18G0659 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 1.4e-50 203.8 202 71.3
Actinidia23132 Actinidia chinensis HOM05D003822 ORTHO05D004484 2.4e-50 203.0 135 74.8
Solyc06g007700.4 Solanum lycopersicum HOM05D003822 ORTHO05D004484 2.4e-50 203.0 144 72.2
TAR362G1102 Trochodendron aralioides HOM05D003822 ORTHO05D004484 2.4e-50 203.0 226 60.2
CsaV3_4G002560 Cucumis sativus L. HOM05D003822 ORTHO05D004484 1.2e-49 200.7 134 72.4
Sopen06g002590 Solanum pennellii HOM05D003822 ORTHO05D004484 1.2e-49 200.7 144 71.5
Cpa.g.sc8.23 Carica papaya HOM05D003822 ORTHO05D004484 2.7e-49 199.5 125 76.0
THA.LOC104822456 Tarenaya hassleriana HOM05D003822 ORTHO05D004484 2.7e-49 199.5 206 69.4
PGSC0003DMG400020552 Solanum tuberosum HOM05D003822 ORTHO05D004484 3.5e-49 199.1 150 68.7
Actinidia11655 Actinidia chinensis HOM05D003822 ORTHO05D004484 4.6e-49 198.7 212 68.4
CiPaw.02G103400 Carya illinoinensis HOM05D003822 ORTHO05D004484 6.0e-49 198.4 129 73.6
CiPaw.01G173700 Carya illinoinensis HOM05D003822 ORTHO05D004484 1.0e-48 197.6 210 73.8
Peaxi162Scf00372g00722 Petunia axillaris HOM05D003822 ORTHO05D004484 1.0e-48 197.6 136 72.1
Sabra07G0108500 Salix brachista HOM05D003822 ORTHO05D004484 1.0e-48 197.6 205 67.3
Sabra07G0120800 Salix brachista HOM05D003822 ORTHO05D004484 1.0e-48 197.6 205 67.3
FAN08G2486 Fragaria x ananassa HOM05D003822 ORTHO05D004484 1.7e-48 196.8 222 57.2
Sabra14G0133100 Salix brachista HOM05D003822 ORTHO05D004484 2.3e-48 196.4 129 74.4
Lj3g0024368 Lotus japonicus HOM05D003822 ORTHO05D004484 3.9e-48 195.7 135 71.1
Duzib138G1354 Durio zibethinus HOM05D003822 ORTHO05D004484 5.1e-48 195.3 124 75.0
Aqoxy2G04159 Aquilegia oxysepala HOM05D003822 ORTHO05D004484 6.6e-48 194.9 127 74.0
Cfa015215 Carpinus fangiana HOM05D003822 ORTHO05D004484 6.6e-48 194.9 130 73.8
Lalb_Chr24g0396641 Lupinus albus HOM05D003822 ORTHO05D004484 6.6e-48 194.9 162 63.0
MELO3C017788.2 Cucumis melo HOM05D003822 ORTHO05D004484 8.7e-48 194.5 127 74.8
Lsat_1_v5_gn_8_98601 Lactuca sativa HOM05D003822 ORTHO05D004484 1.1e-47 194.1 129 73.6
Lalb_Chr22g0352031 Lupinus albus HOM05D003822 ORTHO05D004484 1.1e-47 194.1 207 66.7
Potri.017G018400 Populus trichocarpa HOM05D003822 ORTHO05D004484 1.5e-47 193.7 219 66.2
Phvul.011G052000 Phaseolus vulgaris HOM05D003822 ORTHO05D004484 1.9e-47 193.4 201 64.7
Medtr2g099360 Medicago truncatula HOM05D003822 ORTHO05D004484 3.3e-47 192.6 133 69.2
PSO017G3256 Papaver somniferum HOM05D003822 ORTHO05D004484 3.3e-47 192.6 132 74.2
PSO837G0022 Papaver somniferum HOM05D003822 ORTHO05D004484 3.3e-47 192.6 132 74.2
Sed0021377 Sechium edule HOM05D003822 ORTHO05D004484 3.3e-47 192.6 136 72.1
TAR365G1107 Trochodendron aralioides HOM05D003822 ORTHO05D004484 3.3e-47 192.6 196 69.9
PGSC0003DMG400020658 Solanum tuberosum HOM05D003822 ORTHO05D004484 1.3e-46 190.7 141 70.9
Sp3g06480 Schrenkiella parvula HOM05D003822 ORTHO05D004484 2.1e-46 189.9 220 70.5
Haze_01421 Corylus avellana HOM05D003822 ORTHO05D004484 2.8e-46 189.5 225 63.1
Sabra17G0014400 Salix brachista HOM05D000455 ORTHO05D000434 2.8e-46 189.5 214 65.4
Sed0005976 Sechium edule HOM05D003822 ORTHO05D004484 4.8e-46 188.7 128 71.9
Atru.chr6.3488 Acer truncatum HOM05D003822 ORTHO05D004484 1.1e-45 187.6 129 70.5
HanXRQChr01g0010521 Helianthus annuus HOM05D003822 ORTHO05D004484 1.1e-45 187.6 219 69.9
Lj3g0026330 Lotus japonicus HOM05D003822 ORTHO05D004484 1.1e-45 187.6 132 72.0
Thhalv10021215m.g Eutrema salsugineum HOM05D003822 ORTHO05D004484 1.4e-45 187.2 219 63.0
FvH4_5g32960 Fragaria vesca HOM05D003822 ORTHO05D004484 1.4e-45 187.2 125 71.2
FAN18G3379 Fragaria x ananassa HOM05D003822 ORTHO05D004484 1.4e-45 187.2 125 71.2
FAN04G1289 Fragaria x ananassa HOM05D003822 ORTHO05D004484 3.1e-45 186.0 125 70.4
Aa31LG5G18100 Aethionema arabicum HOM05D003822 ORTHO05D004484 4.0e-45 185.7 132 70.5
Phvul.005G155400 Phaseolus vulgaris HOM05D003822 ORTHO05D004484 5.3e-45 185.3 210 67.1
PGR102G0947 Punica granatum HOM05D003822 ORTHO05D004484 5.3e-45 185.3 213 65.7
EL10Ac3g06027 Beta vulgaris HOM05D003822 ORTHO05D004484 6.9e-45 184.9 135 68.1
AT3G07560 Arabidopsis thaliana HOM05D003822 ORTHO05D004484 9.0e-45 184.5 219 62.6
PGR083G0513 Punica granatum HOM05D003822 ORTHO05D004484 1.2e-44 184.1 118 77.1
Ah.07g202460 Amaranthus hybridus HOM05D003822 ORTHO05D004484 2.0e-44 183.3 204 61.3
RcHm_v2.0_Chr7g0230961 Rosa chinensis HOM05D003822 ORTHO05D004484 2.0e-44 183.3 150 62.0
MD04G1046700 Malus domestica HOM05D003822 ORTHO05D004484 3.4e-44 182.6 217 63.6
CANSAT56G4141 Cannabis sativa HOM05D003822 ORTHO05D004484 4.4e-44 182.2 132 65.9
Migut.N00690 Erythranthe guttata HOM05D003822 ORTHO05D004484 5.8e-44 181.8 144 67.4
A05p40650 Brassica napus HOM05D003822 ORTHO05D004484 9.9e-44 181.0 207 63.3
BraA05t22796Z Brassica rapa HOM05D003822 ORTHO05D004484 9.9e-44 181.0 207 63.3
Carub.0003s0711 Capsella rubella HOM05D003822 ORTHO05D004484 9.9e-44 181.0 151 64.9
RcHm_v2.0_Chr1g0340971 Rosa chinensis HOM05D003822 ORTHO05D004484 9.9e-44 181.0 223 53.8
AL3G18900 Arabidopsis lyrata HOM05D003822 ORTHO05D004484 1.3e-43 180.6 131 71.8
A03p35330 Brassica napus HOM05D003822 ORTHO05D004484 1.7e-43 180.3 131 71.8
BcaB03g14694 Brassica carinata HOM05D003822 ORTHO05D004484 3.8e-43 179.1 134 70.1
C03p42940 Brassica napus HOM05D003822 ORTHO05D004484 6.4e-43 178.3 133 70.7
BolC3t16562H Brassica oleracea HOM05D003822 ORTHO05D004484 6.4e-43 178.3 133 70.7
BcaC05g29550 Brassica carinata HOM05D003822 ORTHO05D004484 1.9e-42 176.8 158 60.8
BcaC01g04277 Brassica carinata HOM05D003822 ORTHO05D004484 1.2e-41 174.1 131 70.2
BolC5t34630H Brassica oleracea HOM05D003822 ORTHO05D004484 1.6e-41 173.7 138 65.2
MD00G1127600 Malus domestica HOM05D003822 ORTHO05D004484 1.6e-41 173.7 219 62.6
Hund03185 Selenicereus undatus HOM05D003822 ORTHO05D004484 1.6e-41 173.7 204 59.3
CAN.G181.49 Capsicum annuum HOM05D003822 ORTHO05D004484 2.7e-41 172.9 121 72.7
CDE05G3137 Ceratophyllum demersum HOM05D003822 ORTHO05D004484 3.5e-41 172.6 133 67.7
AUR62002363 Chenopodium quinoa HOM05D003822 ORTHO05D004484 7.9e-41 171.4 220 62.3
Lsat_1_v5_gn_5_175601 Lactuca sativa HOM05D003822 ORTHO05D004484 7.9e-41 171.4 115 73.9
HPP92_015668 Vanilla planifolia HOM05D003822 ORTHO05D004484 1.3e-40 170.6 124 67.7
CANSAT11G1915 Cannabis sativa HOM05D003822 ORTHO05D004484 1.7e-40 170.2 132 64.4
C05p59760 Brassica napus HOM05D003822 ORTHO05D004484 3.0e-40 169.5 134 66.4
BraA01t04376Z Brassica rapa HOM05D003822 ORTHO05D004484 1.9e-39 166.8 141 64.5
Sabra17G0002300 Salix brachista HOM05D000455 ORTHO05D000434 4.3e-39 165.6 261 54.8
CSS0026869 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 9.6e-39 164.5 204 68.1
MBI02_g24302_MAGBIO Magnolia biondii HOM05D003822 ORTHO05D004484 1.8e-37 160.2 216 56.9
BcaB04g21287 Brassica carinata HOM05D003822 ORTHO05D004484 2.4e-37 159.8 206 57.8
ClCG07G011660 Citrullus lanatus HOM05D003822 ORTHO05D004484 5.3e-37 158.7 215 43.7
Manes.12G058104 Manihot esculenta HOM05D003822 ORTHO05D004484 5.3e-37 158.7 102 74.5
BolC1t05546H Brassica oleracea HOM05D003822 ORTHO05D004484 1.2e-36 157.5 140 61.4
Manes.11G127100 Manihot esculenta HOM05D003822 ORTHO05D004484 2.0e-36 156.8 175 69.1
CDE02G4798 Ceratophyllum demersum HOM05D003822 ORTHO05D004484 2.6e-36 156.4 122 66.4
ATR0752G090 Amborella trichopoda HOM05D003822 ORTHO05D004484 1.1e-34 151.0 223 52.9
Os07g0152800 Oryza sativa ssp. japonica HOM05D003822 ORTHO05D004484 3.5e-33 146.0 129 55.8
SEGI_07594 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 6.7e-32 141.7 116 58.6
Zm00001eb059960 Zea mays HOM05D003822 ORTHO05D004484 6.7e-32 141.7 126 59.5
AUR62023822 Chenopodium quinoa HOM05D003822 ORTHO05D004484 8.7e-32 141.4 107 62.6
SEGI_01562 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 1.1e-31 141.0 115 59.1
Zm00001eb117520 Zea mays HOM05D003822 ORTHO05D004484 1.1e-31 141.0 126 57.9
MSTRG.12731 Avicennia marina HOM05D003822 ORTHO05D004484 2.5e-31 139.8 99 67.7
SGA_v2.0_scaffold95G28678 Striga asiatica HOM05D003822 ORTHO05D004484 3.3e-31 139.4 134 76.9
Os03g0786000 Oryza sativa ssp. japonica HOM05D003822 ORTHO05D004484 9.6e-31 137.9 133 57.9
FAN01G1095 Fragaria x ananassa HOM05D003822 ORTHO05D004484 1.8e-29 133.7 208 55.3
SMO146G0020 Selaginella moellendorffii HOM05D003822 ORTHO05D004484 5.3e-29 132.1 131 51.9
MBI18_g24478_MAGBIO Magnolia biondii HOM05D003822 ORTHO05D004484 6.9e-29 131.7 135 54.8
CBR_g38951 Chara braunii HOM05D003822 ORTHO05D004484 2.6e-28 129.8 127 52.0
Lj2C1109G11 Lonicera japonica HOM05D003822 ORTHO05D004484 5.8e-28 128.6 142 52.1
AagrBONN_evm.TU.Sc2ySwM_368.3329 Anthoceros agrestis HOM05D003822 ORTHO05D004484 2.5e-26 123.2 125 50.4
Mapoly0080s0067 Marchantia polymorpha HOM05D003822 ORTHO05D004484 3.5e-25 119.4 121 52.1
Gorai.N001500 Gossypium raimondii HOM05D003822 ORTHO05D004484 1.3e-24 117.5 201 49.3
Hma1.2p1_0161F.1_g071790 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 3.0e-24 116.3 209 44.0
Pp3c11_19790 Physcomitrium patens HOM05D003822 ORTHO05D004484 1.1e-21 107.8 121 47.9
FAN06G0586 Fragaria x ananassa HOM05D003822 ORTHO05D004484 1.3e-19 100.9 112 56.2
Thecc.04G171800 Theobroma cacao HOM05D003822 ORTHO05D004484 3.8e-19 99.4 69 68.1
Psat5g291600 Pisum sativum HOM05D003822 ORTHO05D004484 8.5e-19 98.2 61 72.1
MCO15G241 Micromonas commoda HOM05D003822 ORTHO05D004484 1.3e-16 90.9 111 48.6
CARHR082220 Cardamine hirsuta HOM05D003822 ORTHO05D004484 1.6e-14 84.0 74 63.5
Cre13.g574700 Chlamydomonas reinhardtii HOM05D003822 ORTHO05D004484 3.7e-14 82.8 62 62.9
MSTRG.12733 Avicennia marina HOM05D003822 ORTHO05D004484 1.1e-13 81.3 111 60.4
CBR_g50337 Chara braunii HOM05D003822 ORTHO05D004484 6.1e-09 65.5 62 53.2
FAN10G3558 Fragaria x ananassa HOM05D003822 ORTHO05D046505 8.8e-08 61.6 44 70.5


User provided reference genes

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