Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu020316.1 Olea europaea HOM05D002802 ORTHO05D003166 1.2e-51 206.1 95 100.0
Solyc10g081050.1 Solanum lycopersicum HOM05D002802 ORTHO05D003166 1.2e-22 109.8 78 70.5
Sopen10g031570 Solanum pennellii HOM05D002802 ORTHO05D003166 1.2e-22 109.8 78 70.5
Dinv18167 Davidia involucrata HOM05D002802 ORTHO05D003166 3.5e-22 108.2 78 69.2
Dinv11001 Davidia involucrata HOM05D002802 ORTHO05D003166 4.5e-22 107.8 93 59.1
PGSC0003DMG400028199 Solanum tuberosum HOM05D002802 ORTHO05D003166 5.9e-22 107.5 78 69.2
Oeu041692.1 Olea europaea HOM05D002802 ORTHO05D003166 7.7e-22 107.1 78 67.9
Duzib248G0802 Durio zibethinus HOM05D002802 ORTHO05D003166 1.0e-21 106.7 78 66.7
PGR004G1872 Punica granatum HOM05D002802 ORTHO05D003166 1.0e-21 106.7 78 67.9
Lj6P820T73 Lonicera japonica HOM05D002802 ORTHO05D003166 1.3e-21 106.3 78 65.4
CAN.G128.97 Capsicum annuum HOM05D002802 ORTHO05D003166 2.2e-21 105.5 78 67.9
Gohir.A05G126800 Gossypium hirsutum HOM05D002802 ORTHO05D003166 2.2e-21 105.5 78 65.4
MSTRG.529 Avicennia marina HOM05D002802 ORTHO05D003166 2.9e-21 105.1 75 68.0
Duzib251G0708 Durio zibethinus HOM05D002802 ORTHO05D003166 2.9e-21 105.1 78 65.4
Nitab4.5_0000233g0160 Nicotiana tabacum HOM05D002802 ORTHO05D003166 2.9e-21 105.1 78 67.9
Nitab4.5_0004081g0010 Nicotiana tabacum HOM05D002802 ORTHO05D003166 2.9e-21 105.1 78 67.9
Rhsim12G0035600 Rhododendron simsii HOM05D002802 ORTHO05D003166 2.9e-21 105.1 78 65.4
Thecc.02G272900 Theobroma cacao HOM05D002802 ORTHO05D003166 2.9e-21 105.1 78 65.4
CSS0015410 Camellia sinensis var. sinensis HOM05D002802 ORTHO05D003166 3.8e-21 104.8 78 66.7
Gohir.D06G200700 Gossypium hirsutum HOM05D002802 ORTHO05D003166 5.0e-21 104.4 78 64.1
Hma1.2p1_0079F.1_g041670 Hydrangea macrophylla HOM05D002802 ORTHO05D003166 5.0e-21 104.4 78 66.7
Peaxi162Scf00108g00093 Petunia axillaris HOM05D002802 ORTHO05D003166 5.0e-21 104.4 77 68.8
MSTRG.7969 Avicennia marina HOM05D002802 ORTHO05D003166 8.5e-21 103.6 78 64.1
Gorai.009G131900 Gossypium raimondii HOM05D002802 ORTHO05D003166 8.5e-21 103.6 78 64.1
Ciclev10031836m.g Citrus clementina HOM05D002802 ORTHO05D003166 1.1e-20 103.2 78 65.4
QL03p055307 Quercus lobata HOM05D002802 ORTHO05D003166 1.1e-20 103.2 78 65.4
Gohir.A06G192800 Gossypium hirsutum HOM05D002802 ORTHO05D003166 1.5e-20 102.8 78 61.5
Gohir.D05G127700 Gossypium hirsutum HOM05D002802 ORTHO05D003166 1.5e-20 102.8 78 64.1
Eucgr.H04678 Eucalyptus grandis HOM05D002802 ORTHO05D003166 1.9e-20 102.4 78 65.4
COL.COLO4_23605 Corchorus olitorius HOM05D002802 ORTHO05D003166 2.5e-20 102.1 78 64.1
Cc02_g30400 Coffea canephora HOM05D002802 ORTHO05D003166 4.2e-20 101.3 78 61.5
Aqoxy5G03551 Aquilegia oxysepala HOM05D002802 ORTHO05D003166 1.2e-19 99.8 94 54.3
SGA_v2.0_scaffold100G29670 Striga asiatica HOM05D002802 ORTHO05D003166 1.2e-19 99.8 75 64.0
TWI75G0092 Tripterygium wilfordii HOM05D002802 ORTHO05D003166 1.2e-19 99.8 75 66.7
Lalb_Chr13g0294111 Lupinus albus HOM05D002802 ORTHO05D003166 1.6e-19 99.4 73 67.1
Nn3g16562 Nelumbo nucifera HOM05D002802 ORTHO05D003166 1.6e-19 99.4 78 64.1
Migut.K00686 Erythranthe guttata HOM05D002802 ORTHO05D003166 2.1e-19 99.0 78 61.5
Sc04g0009900 Simmondsia chinensis HOM05D002802 ORTHO05D003166 2.1e-19 99.0 78 62.8
MELO3C010723.2 Cucumis melo HOM05D002802 ORTHO05D003166 2.7e-19 98.6 75 65.3
Gorai.010G234200 Gossypium raimondii HOM05D002802 ORTHO05D003166 3.6e-19 98.2 78 62.8
CANSAT01G1939 Cannabis sativa HOM05D002802 ORTHO05D003166 4.7e-19 97.8 78 60.3
CiPaw.05G173300 Carya illinoinensis HOM05D002802 ORTHO05D003166 4.7e-19 97.8 78 61.5
ClCG08G017360 Citrullus lanatus HOM05D002802 ORTHO05D003166 4.7e-19 97.8 75 64.0
Lalb_Chr16g0391031 Lupinus albus HOM05D002802 ORTHO05D003166 4.7e-19 97.8 73 67.1
SGA_v2.0_scaffold22G09720 Striga asiatica HOM05D002802 ORTHO05D003166 4.7e-19 97.8 75 62.7
TAR622G0786 Trochodendron aralioides HOM05D002802 ORTHO05D003166 4.7e-19 97.8 78 60.3
Actinidia30681 Actinidia chinensis HOM05D002802 ORTHO05D003166 8.0e-19 97.1 78 61.5
Atru.chr11.2228 Acer truncatum HOM05D002802 ORTHO05D003166 1.0e-18 96.7 78 60.3
Haze_12336 Corylus avellana HOM05D002802 ORTHO05D003166 1.0e-18 96.7 78 60.3
TAR629G1550 Trochodendron aralioides HOM05D002802 ORTHO05D003166 1.0e-18 96.7 76 64.5
CsaV3_2G025260 Cucumis sativus L. HOM05D002802 ORTHO05D003166 1.4e-18 96.3 75 64.0
TWI36G0807 Tripterygium wilfordii HOM05D002802 ORTHO05D003166 1.4e-18 96.3 75 65.3
unitig_747.g21135 Utricularia gibba HOM05D002802 ORTHO05D003166 1.8e-18 95.9 78 60.3
FvH4_4g24601 Fragaria vesca HOM05D002802 ORTHO05D003166 3.0e-18 95.1 78 60.3
FAN07G2857 Fragaria x ananassa HOM05D002802 ORTHO05D003166 3.0e-18 95.1 78 60.3
Sed0010507 Sechium edule HOM05D002802 ORTHO05D003166 3.0e-18 95.1 75 62.7
MBI11_g42238_MAGBIO Magnolia biondii HOM05D002802 ORTHO05D003166 5.2e-18 94.4 78 59.0
RcHm_v2.0_Chr4g0431611 Rosa chinensis HOM05D002802 ORTHO05D003166 6.8e-18 94.0 78 60.3
Manes.12G016100 Manihot esculenta HOM05D002802 ORTHO05D003166 8.8e-18 93.6 75 61.3
FAN22G1126 Fragaria x ananassa HOM05D002802 ORTHO05D003166 1.5e-17 92.8 78 59.0
HanXRQChr17g0540051 Helianthus annuus HOM05D002802 ORTHO05D003166 1.5e-17 92.8 78 57.7
Lj4g0020754 Lotus japonicus HOM05D002802 ORTHO05D003166 1.5e-17 92.8 80 58.8
ECA246G3629 Erigeron canadensis HOM05D002802 ORTHO05D003166 4.4e-17 91.3 78 56.4
SHI17923 Sapria himalayana HOM05D002802 ORTHO05D003166 7.5e-17 90.5 75 57.3
HanXRQChr12g0372241 Helianthus annuus HOM05D002802 ORTHO05D003166 1.3e-16 89.7 78 56.4
Phvul.002G176700 Phaseolus vulgaris HOM05D002802 ORTHO05D003166 1.7e-16 89.4 73 58.9
Prupe.1G235100 Prunus persica HOM05D002802 ORTHO05D003166 4.8e-16 87.8 82 56.1
HPP92_024690 Vanilla planifolia HOM05D002802 ORTHO05D003166 4.8e-16 87.8 75 58.7
Sabra10G0050100 Salix brachista HOM05D002802 ORTHO05D003166 6.3e-16 87.4 91 51.6
EL10Ac6g13423 Beta vulgaris HOM05D002802 ORTHO05D003166 8.3e-16 87.0 78 52.6
ECA233G4542 Erigeron canadensis HOM05D002802 ORTHO05D003166 8.3e-16 87.0 78 55.1
Os08g0236700 Oryza sativa ssp. japonica HOM05D002802 ORTHO05D003166 1.1e-15 86.7 78 57.7
Glyma.08G101400 Glycine max HOM05D002802 ORTHO05D003166 1.8e-15 85.9 73 60.3
PSO063G1618 Papaver somniferum HOM05D002802 ORTHO05D003166 1.8e-15 85.9 78 53.8
Psat7g079200 Pisum sativum HOM05D002802 ORTHO05D003166 1.8e-15 85.9 73 61.6
TPR.G17072 Trifolium pratense HOM05D002802 ORTHO05D003166 1.8e-15 85.9 78 56.4
VMungo0251G3304 Vigna mungo HOM05D002802 ORTHO05D003166 3.1e-15 85.1 73 58.9
AUR62005562 Chenopodium quinoa HOM05D002802 ORTHO05D003166 4.1e-15 84.7 77 51.9
Medtr8g080020 Medicago truncatula HOM05D002802 ORTHO05D003166 4.1e-15 84.7 73 60.3
AUR62024172 Chenopodium quinoa HOM05D002802 ORTHO05D003166 5.4e-15 84.3 78 51.3
Potri.010G054800 Populus trichocarpa HOM05D002802 ORTHO05D003166 5.4e-15 84.3 82 54.9
Ca_18068_v3 Cicer arietinum L. HOM05D002802 ORTHO05D003166 7.0e-15 84.0 72 61.1
Aa31LG4G12060 Aethionema arabicum HOM05D002802 ORTHO05D003166 2.0e-14 82.4 78 57.7
Ah.03g133790 Amaranthus hybridus HOM05D002802 ORTHO05D003166 2.7e-14 82.0 78 51.3
THA.LOC104807694 Tarenaya hassleriana HOM05D002802 ORTHO05D003166 5.9e-14 80.9 78 53.8
MD13G1109900 Malus domestica HOM05D002802 ORTHO05D003166 7.7e-14 80.5 82 50.0
Manes.13G014700 Manihot esculenta HOM05D002802 ORTHO05D003166 1.7e-13 79.3 90 47.8
Zm00001eb079210 Zea mays HOM05D002802 ORTHO05D003166 1.7e-13 79.3 78 52.6
CARHR060260 Cardamine hirsuta HOM05D002802 ORTHO05D003166 5.0e-13 77.8 75 54.7
Zm00001eb425180 Zea mays HOM05D002802 ORTHO05D003166 5.0e-13 77.8 78 53.8
Carub.0002s1404 Capsella rubella HOM05D002802 ORTHO05D003166 1.9e-12 75.9 75 53.3
AL2G26360 Arabidopsis lyrata HOM05D002802 ORTHO05D003166 4.2e-12 74.7 75 52.0
AT1G67660 Arabidopsis thaliana HOM05D002802 ORTHO05D003166 5.5e-12 74.3 75 52.0
Glyma.05G144902 Glycine max HOM05D002802 ORTHO05D003166 5.5e-12 74.3 73 56.2
Sp5g22660 Schrenkiella parvula HOM05D002802 ORTHO05D003166 9.5e-12 73.6 78 51.3
BcaB03g15179 Brassica carinata HOM05D002802 ORTHO05D003166 1.2e-11 73.2 78 51.3
BcaC08g46174 Brassica carinata HOM05D002802 ORTHO05D003166 1.2e-11 73.2 78 51.3
A07p34170 Brassica napus HOM05D002802 ORTHO05D003166 1.2e-11 73.2 78 51.3
C06p42600 Brassica napus HOM05D002802 ORTHO05D003166 1.2e-11 73.2 78 51.3
BolC6t39179H Brassica oleracea HOM05D002802 ORTHO05D003166 1.2e-11 73.2 78 51.3
ATR0322G049 Amborella trichopoda HOM05D002802 ORTHO05D003166 2.1e-11 72.4 87 50.6
Thhalv10018787m.g Eutrema salsugineum HOM05D002802 ORTHO05D003166 2.1e-11 72.4 78 50.0
ATR1132G069 Amborella trichopoda HOM05D002802 ORTHO05D003166 3.6e-11 71.6 87 49.4
SEGI_08165 Sequoiadendron giganteum HOM05D002802 ORTHO05D003166 1.5e-09 66.2 86 46.5
AagrBONN_evm.TU.Sc2ySwM_228.3602 Anthoceros agrestis HOM05D002802 ORTHO05D003166 2.4e-07 58.9 65 53.8
ATR0589G089 Amborella trichopoda HOM05D002802 ORTHO05D003166 5.4e-07 57.8 81 38.3
Sed0027805 Sechium edule HOM05D002802 ORTHO05D003166 7.0e-07 57.4 74 41.9
Mapoly0001s0317 Marchantia polymorpha HOM05D002802 ORTHO05D003166 1.6e-06 56.2 100 40.0
CBR_g32038 Chara braunii HOM05D002802 ORTHO05D000353 2.7e-06 55.5 81 43.2
HanXRQChr08g0225791 Helianthus annuus HOM05D002802 ORTHO05D003166 2.7e-06 55.5 65 44.6
Pp3c2_28950 Physcomitrium patens HOM05D002802 ORTHO05D003166 2.7e-06 55.5 65 47.7
Actinidia08095 Actinidia chinensis HOM05D002802 ORTHO05D003166 3.5e-06 55.1 49 53.1
Ciclev10031987m.g Citrus clementina HOM05D002802 ORTHO05D003166 3.5e-06 55.1 65 41.5
MBI19_g09319_MAGBIO Magnolia biondii HOM05D002802 ORTHO05D003166 4.5e-06 54.7 71 40.8
SEGI_30742 Sequoiadendron giganteum HOM05D002802 ORTHO05D003166 4.5e-06 54.7 82 39.0


User provided reference genes

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