Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu020282.1 Olea europaea HOM05D006739 ORTHO05D008402 9.9e-39 165.6 151 100.0
Nitab4.5_0002667g0060 Nicotiana tabacum HOM05D006739 ORTHO05D008402 1.3e-25 122.1 151 84.1
Ciclev10000605m.g Citrus clementina HOM05D006739 ORTHO05D008402 4.8e-25 120.2 145 82.8
MSTRG.24837 Avicennia marina HOM05D006739 ORTHO05D008402 1.8e-24 118.2 157 82.8
Migut.N00013 Erythranthe guttata HOM05D006739 ORTHO05D008402 1.8e-24 118.2 146 87.0
RcHm_v2.0_Chr7g0233521 Rosa chinensis HOM05D006739 ORTHO05D008402 3.1e-24 117.5 154 83.1
Hma1.2p1_0010F.1_g006410 Hydrangea macrophylla HOM05D006739 ORTHO05D008402 5.3e-24 116.7 156 79.5
Nitab4.5_0002667g0050 Nicotiana tabacum HOM05D006739 ORTHO05D008402 5.8e-23 113.2 151 82.8
CSS0036090 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 9.9e-23 112.5 62 83.9
Dinv44882 Davidia involucrata HOM05D006739 ORTHO05D008402 2.2e-22 111.3 142 87.3
ECA247G1663 Erigeron canadensis HOM05D006739 ORTHO05D008402 2.2e-22 111.3 148 79.1
QL12p039876 Quercus lobata HOM05D006739 ORTHO05D008402 2.9e-22 110.9 142 81.7
TAR152G0001 Trochodendron aralioides HOM05D006739 ORTHO05D008402 3.8e-22 110.5 142 77.5
Atru.chr13.953 Acer truncatum HOM05D006739 ORTHO05D008402 6.4e-22 109.8 142 76.8
CSS0033703 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 6.4e-22 109.8 144 84.7
Sopen06g003030 Solanum pennellii HOM05D006739 ORTHO05D008402 8.4e-22 109.4 143 85.3
PGSC0003DMG400014713 Solanum tuberosum HOM05D006739 ORTHO05D008402 1.9e-21 108.2 143 85.3
PGSC0003DMG400027357 Solanum tuberosum HOM05D006739 ORTHO05D008402 1.9e-21 108.2 143 85.3
Sc15g0003370 Simmondsia chinensis HOM05D006739 ORTHO05D008402 3.2e-21 107.5 142 82.4
Lsat_1_v5_gn_1_781 Lactuca sativa HOM05D006739 ORTHO05D008402 5.5e-21 106.7 151 79.5
MD15G1390100 Malus domestica HOM05D006739 ORTHO05D008402 2.7e-20 104.4 154 76.6
Peaxi162Scf01212g00003 Petunia axillaris HOM05D006739 ORTHO05D008402 3.5e-20 104.0 148 82.4
Eucgr.F02164 Eucalyptus grandis HOM05D006739 ORTHO05D008402 4.6e-20 103.6 159 74.2
Aqoxy5G01872 Aquilegia oxysepala HOM05D006739 ORTHO05D008402 1.8e-19 101.7 142 81.0
AUR62019126 Chenopodium quinoa HOM05D006739 ORTHO05D008402 1.8e-19 101.7 150 78.0
FAN08G0673 Fragaria x ananassa HOM05D006739 ORTHO05D008402 2.3e-19 101.3 154 79.2
MD08G1206600 Malus domestica HOM05D006739 ORTHO05D008402 2.3e-19 101.3 72 70.8
EL10Ac1g00466 Beta vulgaris HOM05D006739 ORTHO05D008402 3.0e-19 100.9 142 81.0
Actinidia10267 Actinidia chinensis HOM05D006739 ORTHO05D008402 3.9e-19 100.5 155 58.7
Potri.002G109500 Populus trichocarpa HOM05D006739 ORTHO05D008402 6.7e-19 99.8 146 83.6
FvH4_5g34030 Fragaria vesca HOM05D006739 ORTHO05D008402 1.1e-18 99.0 154 78.6
FAN18G3137 Fragaria x ananassa HOM05D006739 ORTHO05D008402 1.1e-18 99.0 154 78.6
HanXRQChr11g0324241 Helianthus annuus HOM05D006739 ORTHO05D008402 1.1e-18 99.0 57 80.7
Manes.05G187600 Manihot esculenta HOM05D006739 ORTHO05D008402 1.1e-18 99.0 64 73.4
CiPaw.08G057600 Carya illinoinensis HOM05D006739 ORTHO05D008402 2.5e-18 97.8 165 65.5
DCAR_019326 Daucus carota HOM05D006739 ORTHO05D008402 4.3e-18 97.1 59 74.6
PSO700G0042 Papaver somniferum HOM05D006739 ORTHO05D008402 4.3e-18 97.1 141 83.0
PSO761G0270 Papaver somniferum HOM05D006739 ORTHO05D008402 4.3e-18 97.1 141 83.0
TAR628G0153 Trochodendron aralioides HOM05D006739 ORTHO05D008402 4.3e-18 97.1 142 82.4
PGR042G0142 Punica granatum HOM05D006739 ORTHO05D008402 7.4e-18 96.3 136 83.8
Cfa013823 Carpinus fangiana HOM05D006739 ORTHO05D008402 9.6e-18 95.9 64 67.2
Haze_22495 Corylus avellana HOM05D006739 ORTHO05D008402 1.3e-17 95.5 64 65.6
Prupe.1G539000 Prunus persica HOM05D006739 ORTHO05D008402 1.3e-17 95.5 154 77.3
SalBow5G4649 Salvia bowleyana HOM05D006739 ORTHO05D008402 1.6e-17 95.1 140 81.4
Sed0004950 Sechium edule HOM05D006739 ORTHO05D008402 1.1e-16 92.4 142 81.0
CAN.G941.26 Capsicum annuum HOM05D006739 ORTHO05D008402 1.4e-16 92.0 131 86.3
MBI16_g36544_MAGBIO Magnolia biondii HOM05D006739 ORTHO05D008402 1.8e-16 91.7 152 75.7
ClCG08G011830 Citrullus lanatus HOM05D006739 ORTHO05D008402 2.4e-16 91.3 161 74.5
ATR0800G015 Amborella trichopoda HOM05D006739 ORTHO05D008402 6.9e-16 89.7 104 73.1
Carub.0001s0928 Capsella rubella HOM05D006739 ORTHO05D008402 6.9e-16 89.7 153 75.8
VMungo1309G0048 Vigna mungo HOM05D006739 ORTHO05D008402 9.0e-16 89.4 151 76.2
THA.LOC104816789 Tarenaya hassleriana HOM05D006739 ORTHO05D008402 1.2e-15 89.0 142 79.6
Sabra02G0086200 Salix brachista HOM05D006739 ORTHO05D008402 1.5e-15 88.6 60 73.3
AT1G09900 Arabidopsis thaliana HOM05D006739 ORTHO05D008402 2.0e-15 88.2 153 74.5
Duzib093G0111 Durio zibethinus HOM05D006739 ORTHO05D008402 2.0e-15 88.2 142 79.6
AUR62014385 Chenopodium quinoa HOM05D006739 ORTHO05D008402 2.6e-15 87.8 150 75.3
Actinidia19611 Actinidia chinensis HOM05D006739 ORTHO05D008402 3.4e-15 87.4 115 72.2
Aa31LG1G4990 Aethionema arabicum HOM05D006739 ORTHO05D008402 3.4e-15 87.4 142 77.5
Ah.05g171720 Amaranthus hybridus HOM05D006739 ORTHO05D008402 3.4e-15 87.4 158 72.2
Glyma.06G092600 Glycine max HOM05D006739 ORTHO05D008402 3.4e-15 87.4 151 74.2
Sp1g08530 Schrenkiella parvula HOM05D006739 ORTHO05D008402 3.4e-15 87.4 161 72.7
Glyma.04G090900 Glycine max HOM05D006739 ORTHO05D008402 4.5e-15 87.0 151 75.5
Phvul.009G145100 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 4.5e-15 87.0 151 74.8
AL1G20500 Arabidopsis lyrata HOM05D006739 ORTHO05D008402 5.8e-15 86.7 153 74.5
A06p06610 Brassica napus HOM05D006739 ORTHO05D008402 7.6e-15 86.3 142 77.5
BraA06t23875Z Brassica rapa HOM05D006739 ORTHO05D008402 7.6e-15 86.3 142 77.5
Rhsim07G0214200 Rhododendron simsii HOM05D006739 ORTHO05D008402 1.0e-14 85.9 99 81.8
C05p08020 Brassica napus HOM05D006739 ORTHO05D008402 1.3e-14 85.5 142 77.5
MELO3C011106.2 Cucumis melo HOM05D006739 ORTHO05D008402 1.3e-14 85.5 134 82.8
TWI56G0071 Tripterygium wilfordii HOM05D006739 ORTHO05D008402 1.3e-14 85.5 55 72.7
BcaC05g24834 Brassica carinata HOM05D006739 ORTHO05D008402 2.2e-14 84.7 142 77.5
Thecc.08G075400 Theobroma cacao HOM05D006739 ORTHO05D008402 3.8e-14 84.0 141 80.9
BolC5t29554H Brassica oleracea HOM05D006739 ORTHO05D008402 4.9e-14 83.6 142 76.8
CsaV3_2G030450 Cucumis sativus L. HOM05D006739 ORTHO05D008402 8.4e-14 82.8 133 82.0
CARHR009960 Cardamine hirsuta HOM05D006739 ORTHO05D008402 1.1e-13 82.4 153 73.9
Lj1g0027306 Lotus japonicus HOM05D006739 ORTHO05D008402 3.2e-13 80.9 60 65.0
Glyma.14G184200 Glycine max HOM05D006739 ORTHO05D008402 5.5e-13 80.1 142 72.5
Glyma.02G216900 Glycine max HOM05D006739 ORTHO05D008402 9.3e-13 79.3 142 72.5
DCAR_012846 Daucus carota HOM05D006739 ORTHO05D008402 1.2e-12 79.0 58 63.8
arahy.Tifrunner.gnm1.ann1.CH37P4 Arachis hypogaea HOM05D006739 ORTHO05D008402 2.1e-12 78.2 159 45.9
Gohir.A06G030375 Gossypium hirsutum HOM05D006739 ORTHO05D008402 2.1e-12 78.2 141 79.4
vmacro04630 Vaccinium macrocarpon HOM05D006739 ORTHO05D008402 3.5e-12 77.4 65 63.1
Gohir.D06G029600 Gossypium hirsutum HOM05D006739 ORTHO05D008402 4.6e-12 77.0 141 78.7
Gorai.010G032500 Gossypium raimondii HOM05D006739 ORTHO05D008402 4.6e-12 77.0 141 78.7
Ca_15539_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 1.8e-11 75.1 59 55.9
COL.COLO4_35303 Corchorus olitorius HOM05D006739 ORTHO05D008402 1.8e-11 75.1 70 61.4
Ca_05489_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 2.3e-11 74.7 142 49.3
Ca_29619_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 2.3e-11 74.7 142 49.3
SGA_v2.0_scaffold123G33426 Striga asiatica HOM05D006739 ORTHO05D008402 2.3e-11 74.7 43 76.7
arahy.Tifrunner.gnm1.ann1.M3C1JT Arachis hypogaea HOM05D006739 ORTHO05D008402 3.0e-11 74.3 159 32.1
Oeu012210.1 Olea europaea HOM05D006739 ORTHO05D008402 5.1e-11 73.6 108 82.4
Cc10_g08260 Coffea canephora HOM05D008425 ORTHO05D010555 6.7e-11 73.2 109 78.9
Dinv22007 Davidia involucrata HOM05D006739 ORTHO05D008402 8.7e-11 72.8 109 79.8
TAR381G0861 Trochodendron aralioides HOM05D006739 ORTHO05D008402 1.5e-10 72.0 75 53.3
Phvul.008G184000 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 1.9e-10 71.6 69 53.6
Hund26854 Selenicereus undatus HOM05D006739 ORTHO05D008402 1.9e-10 71.6 148 33.8
VMungo0647G1229 Vigna mungo HOM05D006739 ORTHO05D008402 3.3e-10 70.9 60 58.3
Phvul.008G183900 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 4.3e-10 70.5 60 56.7
CDE06G1140 Ceratophyllum demersum HOM05D002753 ORTHO05D003097 7.4e-10 69.7 106 69.8
CDE07G2071 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 9.6e-10 69.3 50 66.0
Duzib116G0618 Durio zibethinus HOM05D006739 ORTHO05D008402 1.3e-09 68.9 160 70.6
Hund26833 Selenicereus undatus HOM05D006739 ORTHO05D008402 1.6e-09 68.6 112 67.0
Actinidia19612 Actinidia chinensis HOM05D006739 ORTHO05D008402 2.8e-09 67.8 109 78.9
Hund26855 Selenicereus undatus HOM05D006739 ORTHO05D008402 4.8e-09 67.0 68 52.9
Hund26853 Selenicereus undatus HOM05D006739 ORTHO05D008402 8.2e-09 66.2 111 66.7
CDE04G0064 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 1.8e-08 65.1 51 62.7
VMungo0647G0534 Vigna mungo HOM05D006739 ORTHO05D008402 4.1e-08 63.9 123 42.3
Hund26842 Selenicereus undatus HOM05D006739 ORTHO05D008402 9.0e-08 62.8 108 68.5
MBI16_g14339_MAGBIO Magnolia biondii HOM05D006739 ORTHO05D008402 1.2e-07 62.4 109 78.0
CANSAT25G1844 Cannabis sativa HOM05D006739 ORTHO05D008402 1.5e-07 62.0 47 63.8
TPR.G15758 Trifolium pratense HOM05D000069 ORTHO05D001849 7.6e-07 59.7 63 49.2
HPP92_004375 Vanilla planifolia HOM05D006739 ORTHO05D008402 8.5e-06 56.2 49 59.2


User provided reference genes

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