Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu020239.1 Olea europaea HOM05D000827 ORTHO05D001318 2.6e-39 165.2 105 100.0
Migut.B01419 Erythranthe guttata HOM05D000827 ORTHO05D001318 2.0e-18 95.9 93 58.1
MSTRG.17081 Avicennia marina HOM05D000827 ORTHO05D001318 3.2e-13 78.6 97 60.8
SalBow5G5239 Salvia bowleyana HOM05D000827 ORTHO05D001318 7.2e-13 77.4 107 54.2
MSTRG.20628 Avicennia marina HOM05D000827 ORTHO05D001318 9.5e-13 77.0 99 54.5
Actinidia31732 Actinidia chinensis HOM05D000827 ORTHO05D001318 3.6e-12 75.1 96 44.8
TAR629G0081 Trochodendron aralioides HOM05D000827 ORTHO05D001318 3.6e-12 75.1 96 44.8
SGA_v2.0_scaffold98G29374 Striga asiatica HOM05D000827 ORTHO05D001318 8.0e-12 73.9 104 51.0
TWI34G0874 Tripterygium wilfordii HOM05D000827 ORTHO05D001318 3.0e-11 72.0 91 47.3
Actinidia21589 Actinidia chinensis HOM05D005695 ORTHO05D007810 4.0e-11 71.6 110 55.5
Manes.09G133600 Manihot esculenta HOM05D000827 ORTHO05D001318 6.8e-11 70.9 98 45.9
TAR636G2815 Trochodendron aralioides HOM05D000827 ORTHO05D001318 6.8e-11 70.9 96 44.8
vmacro13599 Vaccinium macrocarpon HOM05D000827 ORTHO05D001318 1.5e-10 69.7 49 73.5
Nn1g09343 Nelumbo nucifera HOM05D000827 ORTHO05D001318 2.6e-10 68.9 96 49.0
PGR042G3744 Punica granatum HOM05D000827 ORTHO05D001318 2.6e-10 68.9 115 50.4
Atru.chr2.1633 Acer truncatum HOM05D000827 ORTHO05D001318 5.7e-10 67.8 99 41.4
Dinv43520 Davidia involucrata HOM05D000827 ORTHO05D001318 5.7e-10 67.8 103 52.4
Nitab4.5_0001175g0150 Nicotiana tabacum HOM05D000827 ORTHO05D001318 5.7e-10 67.8 101 50.5
Dinv43960 Davidia involucrata HOM05D000827 ORTHO05D001318 7.5e-10 67.4 101 48.5
QL04p053399 Quercus lobata HOM05D000827 ORTHO05D001318 7.5e-10 67.4 116 45.7
Solyc08g005590.4 Solanum lycopersicum HOM05D000827 ORTHO05D001318 7.5e-10 67.4 101 45.5
Sopen08g001620 Solanum pennellii HOM05D000827 ORTHO05D001318 7.5e-10 67.4 101 45.5
RcHm_v2.0_Chr1g0340731 Rosa chinensis HOM05D000827 ORTHO05D001318 9.8e-10 67.0 114 49.1
ClCG05G002470 Citrullus lanatus HOM05D000827 ORTHO05D001318 1.3e-09 66.6 115 41.7
TWI32G0689 Tripterygium wilfordii HOM05D000827 ORTHO05D001318 1.3e-09 66.6 119 39.5
Sed0016100 Sechium edule HOM05D000827 ORTHO05D001318 1.7e-09 66.2 109 39.4
Manes.08G156400 Manihot esculenta HOM05D000827 ORTHO05D001318 2.2e-09 65.9 88 44.3
Prupe.2G106900 Prunus persica HOM05D000827 ORTHO05D001318 2.8e-09 65.5 111 45.0
PGSC0003DMG400018478 Solanum tuberosum HOM05D000827 ORTHO05D001318 2.8e-09 65.5 101 44.6
Ciclev10033040m.g Citrus clementina HOM05D000827 ORTHO05D001318 3.7e-09 65.1 94 43.6
CSS0035225 Camellia sinensis var. sinensis HOM05D000827 ORTHO05D001318 4.9e-09 64.7 99 50.5
Dinv37426 Davidia involucrata HOM05D000827 ORTHO05D001318 4.9e-09 64.7 98 43.9
Cc08_g05790 Coffea canephora HOM05D000827 ORTHO05D001318 8.3e-09 63.9 90 41.1
Haze_15786 Corylus avellana HOM05D000827 ORTHO05D001318 8.3e-09 63.9 49 59.2
Thhalv10008891m.g Eutrema salsugineum HOM05D000827 ORTHO05D001318 8.3e-09 63.9 96 43.8
Thhalv10017454m.g Eutrema salsugineum HOM05D000827 ORTHO05D001318 8.3e-09 63.9 91 46.2
Nitab4.5_0000792g0150 Nicotiana tabacum HOM05D000827 ORTHO05D001318 8.3e-09 63.9 100 45.0
Rhsim07G0047800 Rhododendron simsii HOM05D000827 ORTHO05D001318 1.1e-08 63.5 108 57.4
ATR0568G208 Amborella trichopoda HOM05D000827 ORTHO05D001318 1.4e-08 63.2 96 39.6
CSS0014939 Camellia sinensis var. sinensis HOM05D000827 ORTHO05D001318 1.4e-08 63.2 104 50.0
CAN.G930.2 Capsicum annuum HOM05D000827 ORTHO05D001318 1.4e-08 63.2 101 40.6
Peaxi162Scf00907g00019 Petunia axillaris HOM05D000827 ORTHO05D001318 1.8e-08 62.8 45 64.4
Sabra13G0061500 Salix brachista HOM05D000827 ORTHO05D001318 1.8e-08 62.8 95 46.3
unitig_26.g8845 Utricularia gibba HOM05D000827 ORTHO05D001318 1.8e-08 62.8 104 43.3
CsaV3_3G009900 Cucumis sativus L. HOM05D000827 ORTHO05D001318 2.4e-08 62.4 108 39.8
Sopen08g024030 Solanum pennellii HOM05D000827 ORTHO05D001318 2.4e-08 62.4 97 52.6
PGSC0003DMG400001965 Solanum tuberosum HOM05D000827 ORTHO05D001318 2.4e-08 62.4 97 52.6
MELO3C022482.2 Cucumis melo HOM05D000827 ORTHO05D001318 3.1e-08 62.0 111 37.8
Potri.013G070600 Populus trichocarpa HOM05D000827 ORTHO05D001318 3.1e-08 62.0 93 55.9
HPP92_022746 Vanilla planifolia HOM05D005374 ORTHO05D006534 3.1e-08 62.0 41 68.3
BcaB03g13793 Brassica carinata HOM05D000827 ORTHO05D001318 4.1e-08 61.6 96 41.7
MELO3C006211.2 Cucumis melo HOM05D000827 ORTHO05D001318 4.1e-08 61.6 107 37.4
Nitab4.5_0006785g0040 Nicotiana tabacum HOM05D000827 ORTHO05D001318 4.1e-08 61.6 45 64.4
ClCG06G000610 Citrullus lanatus HOM05D000827 ORTHO05D001318 5.4e-08 61.2 98 40.8
HanXRQChr01g0018471 Helianthus annuus HOM05D000827 ORTHO05D001318 5.4e-08 61.2 105 39.0
PSO017G6582 Papaver somniferum HOM05D000827 ORTHO05D001318 5.4e-08 61.2 98 44.9
A05p25580 Brassica napus HOM05D000827 ORTHO05D001318 7.0e-08 60.8 96 40.6
BraA05t21440Z Brassica rapa HOM05D000827 ORTHO05D001318 7.0e-08 60.8 96 40.6
COL.COLO4_11280 Corchorus olitorius HOM05D000827 ORTHO05D001318 7.0e-08 60.8 92 37.0
FAN10G1218 Fragaria x ananassa HOM05D000827 ORTHO05D001318 7.0e-08 60.8 114 45.6
Hma1.2p1_0680F.1_g202390 Hydrangea macrophylla HOM05D000827 ORTHO05D001318 7.0e-08 60.8 91 44.0
PSO063G1923 Papaver somniferum HOM05D000827 ORTHO05D001318 9.2e-08 60.5 98 44.9
Cfa003700 Carpinus fangiana HOM05D000827 ORTHO05D001318 1.2e-07 60.1 50 58.0
AUR62015622 Chenopodium quinoa HOM05D000827 ORTHO05D001318 1.2e-07 60.1 81 43.2
Nitab4.5_0000030g0470 Nicotiana tabacum HOM05D000827 ORTHO05D001318 1.2e-07 60.1 101 41.6
Solyc08g075400.3 Solanum lycopersicum HOM05D000827 ORTHO05D001318 1.2e-07 60.1 97 41.2
THA.LOC104814391 Tarenaya hassleriana HOM05D000827 ORTHO05D001318 1.2e-07 60.1 100 40.0
AL4G31640 Arabidopsis lyrata HOM05D000827 ORTHO05D001318 1.6e-07 59.7 91 41.8
CSS0035652 Camellia sinensis var. sinensis HOM05D000827 ORTHO05D001318 1.6e-07 59.7 45 57.8
Nitab4.5_0016158g0010 Nicotiana tabacum HOM05D000827 ORTHO05D001318 1.6e-07 59.7 101 57.4
GSVIVG01019325001 Vitis vinifera HOM05D000827 ORTHO05D001318 1.6e-07 59.7 45 64.4
Carub.0004s1729 Capsella rubella HOM05D000827 ORTHO05D001318 2.0e-07 59.3 100 40.0
MD07G1081700 Malus domestica HOM05D000827 ORTHO05D001318 2.0e-07 59.3 88 40.9
FvH4_7g08300 Fragaria vesca HOM05D000827 ORTHO05D001318 2.7e-07 58.9 119 44.5
FAN01G3073 Fragaria x ananassa HOM05D000827 ORTHO05D001318 2.7e-07 58.9 113 46.0
FAN03G1816 Fragaria x ananassa HOM05D000827 ORTHO05D001318 2.7e-07 58.9 119 43.7
Gohir.D11G237200 Gossypium hirsutum HOM05D000827 ORTHO05D001318 2.7e-07 58.9 50 62.0
Gorai.007G250300 Gossypium raimondii HOM05D000827 ORTHO05D001318 2.7e-07 58.9 50 62.0
Rhsim11G0036900 Rhododendron simsii HOM05D000827 ORTHO05D001318 2.7e-07 58.9 90 37.8
CARHR129790 Cardamine hirsuta HOM05D000827 ORTHO05D001318 3.5e-07 58.5 91 40.7
Nn1g04640 Nelumbo nucifera HOM05D000827 ORTHO05D001318 3.5e-07 58.5 43 58.1
vmacro00092 Vaccinium macrocarpon HOM05D000827 ORTHO05D001318 3.5e-07 58.5 90 38.9
unitig_0.g1359 Utricularia gibba HOM05D000827 ORTHO05D001318 4.5e-07 58.2 41 65.9
BcaC05g27961 Brassica carinata HOM05D000827 ORTHO05D001318 5.9e-07 57.8 92 40.2
C05p39690 Brassica napus HOM05D000827 ORTHO05D001318 5.9e-07 57.8 92 40.2
BolC5t32712H Brassica oleracea HOM05D000827 ORTHO05D001318 5.9e-07 57.8 92 40.2
CSS0045636 Camellia sinensis var. sinensis HOM05D000827 ORTHO05D001318 5.9e-07 57.8 45 55.6
CARHR031060 Cardamine hirsuta HOM05D000827 ORTHO05D001318 5.9e-07 57.8 49 59.2
CDE02G1634 Ceratophyllum demersum HOM05D000827 ORTHO05D001318 5.9e-07 57.8 87 41.4
CsaV3_6G006380 Cucumis sativus L. HOM05D000827 ORTHO05D001318 5.9e-07 57.8 101 37.6
Nitab4.5_0002244g0100 Nicotiana tabacum HOM05D000827 ORTHO05D001318 5.9e-07 57.8 49 61.2
TWI31G1098 Tripterygium wilfordii HOM05D000827 ORTHO05D001318 5.9e-07 57.8 40 67.5
Aqoxy6G02793 Aquilegia oxysepala HOM05D000827 ORTHO05D001318 7.7e-07 57.4 70 45.7
Carub.0001s3006 Capsella rubella HOM05D000827 ORTHO05D001318 7.7e-07 57.4 100 41.0
AUR62038273 Chenopodium quinoa HOM05D000827 ORTHO05D001318 7.7e-07 57.4 40 65.0
Gohir.A08G149400 Gossypium hirsutum HOM05D000827 ORTHO05D001318 7.7e-07 57.4 49 57.1
Lalb_Chr05g0215071 Lupinus albus HOM05D000827 ORTHO05D001318 7.7e-07 57.4 41 65.9
QL11p032161 Quercus lobata HOM05D000827 ORTHO05D001318 7.7e-07 57.4 41 63.4
Aa31LG9G15740 Aethionema arabicum HOM05D000827 ORTHO05D001318 1.0e-06 57.0 49 61.2
THA.LOC104820816 Tarenaya hassleriana HOM05D000827 ORTHO05D001318 1.0e-06 57.0 106 43.4
Atru.chr5.2422 Acer truncatum HOM05D000827 ORTHO05D001318 1.3e-06 56.6 40 65.0
FAN06G2126 Fragaria x ananassa HOM05D000827 ORTHO05D001318 1.3e-06 56.6 119 43.7
Glyma.01G154200 Glycine max HOM05D000827 ORTHO05D001318 1.3e-06 56.6 98 48.0
Peaxi162Scf00193g00721 Petunia axillaris HOM05D000827 ORTHO05D001318 1.3e-06 56.6 49 59.2
TAR628G1002 Trochodendron aralioides HOM05D000827 ORTHO05D001318 1.3e-06 56.6 40 62.5
Ah.03g146290 Amaranthus hybridus HOM05D000827 ORTHO05D001318 1.7e-06 56.2 40 65.0
AT2G35605 Arabidopsis thaliana HOM05D000827 ORTHO05D001318 1.7e-06 56.2 92 39.1
EL10Ac6g15667 Beta vulgaris HOM05D000827 ORTHO05D001318 1.7e-06 56.2 40 65.0
Eucgr.G01289 Eucalyptus grandis HOM05D000827 ORTHO05D001318 1.7e-06 56.2 40 65.0
HanXRQChr01g0025031 Helianthus annuus HOM05D000827 ORTHO05D001318 1.7e-06 56.2 51 54.9
Sp1g27440 Schrenkiella parvula HOM05D000827 ORTHO05D001318 1.7e-06 56.2 96 40.6
AL1G45830 Arabidopsis lyrata HOM05D000827 ORTHO05D001318 2.3e-06 55.8 49 55.1
A09p34620 Brassica napus HOM05D000827 ORTHO05D001318 2.3e-06 55.8 92 41.3
BraA09t38998Z Brassica rapa HOM05D000827 ORTHO05D001318 2.3e-06 55.8 92 41.3
CANSAT80G2464 Cannabis sativa HOM05D000827 ORTHO05D001318 2.3e-06 55.8 88 40.9
Cfa012293 Carpinus fangiana HOM05D000827 ORTHO05D001318 2.3e-06 55.8 80 40.0
Gohir.A03G184500 Gossypium hirsutum HOM05D000827 ORTHO05D001318 2.3e-06 55.8 40 62.5
Gohir.D02G206000 Gossypium hirsutum HOM05D000827 ORTHO05D001318 2.3e-06 55.8 40 62.5
Gohir.D08G170400 Gossypium hirsutum HOM05D000827 ORTHO05D001318 2.3e-06 55.8 49 55.1
AT1G31760 Arabidopsis thaliana HOM05D000827 ORTHO05D001318 2.9e-06 55.5 49 55.1
EL10Ac4g08090 Beta vulgaris HOM05D000827 ORTHO05D001318 2.9e-06 55.5 49 55.1
BraA05t23111Z Brassica rapa HOM05D000827 ORTHO05D001318 2.9e-06 55.5 115 40.0
Cc02_g26480 Coffea canephora HOM05D000827 ORTHO05D001318 2.9e-06 55.5 50 54.0
Peaxi162Scf00045g00722 Petunia axillaris HOM05D000827 ORTHO05D001318 2.9e-06 55.5 49 57.1
Cpa.g.sc73.28 Carica papaya HOM05D000827 ORTHO05D001318 3.8e-06 55.1 44 56.8
AUR62003961 Chenopodium quinoa HOM05D000827 ORTHO05D001318 3.8e-06 55.1 40 62.5
ECA233G5913 Erigeron canadensis HOM05D000827 ORTHO05D001318 3.8e-06 55.1 50 56.0
Migut.E01374 Erythranthe guttata HOM05D000827 ORTHO05D001318 3.8e-06 55.1 40 60.0
Gorai.004G177900 Gossypium raimondii HOM05D000827 ORTHO05D001318 3.8e-06 55.1 49 55.1
TPR.G8987 Trifolium pratense HOM05D000827 ORTHO05D001318 3.8e-06 55.1 40 62.5
Carub.0007s0607 Capsella rubella HOM05D000827 ORTHO05D001318 5.0e-06 54.7 40 60.0
DCAR_004528 Daucus carota HOM05D000827 ORTHO05D001318 5.0e-06 54.7 40 62.5
Lj2g0023362 Lotus japonicus HOM05D000827 ORTHO05D001318 5.0e-06 54.7 80 40.0
PGR042G0057 Punica granatum HOM05D000827 ORTHO05D001318 5.0e-06 54.7 45 53.3
SEGI_40966 Sequoiadendron giganteum HOM05D000827 ORTHO05D001318 5.0e-06 54.7 45 55.6
Aa31LG8G12940 Aethionema arabicum HOM05D000827 ORTHO05D001318 6.6e-06 54.3 40 60.0
AL7G16980 Arabidopsis lyrata HOM05D000827 ORTHO05D001318 6.6e-06 54.3 40 60.0
BcaB07g32822 Brassica carinata HOM05D000827 ORTHO05D001318 6.6e-06 54.3 96 37.5
Ca_25044_v3 Cicer arietinum L. HOM05D000827 ORTHO05D001318 6.6e-06 54.3 49 55.1
ClCG02G006640 Citrullus lanatus HOM05D000827 ORTHO05D001318 6.6e-06 54.3 40 65.0
Glyma.11G090400 Glycine max HOM05D000827 ORTHO05D001318 6.6e-06 54.3 50 56.0
Psat2g145520 Pisum sativum HOM05D000827 ORTHO05D001318 6.6e-06 54.3 44 52.3
CiPaw.06G167600 Carya illinoinensis HOM05D000827 ORTHO05D001318 8.6e-06 53.9 40 62.5
CDE06G1156 Ceratophyllum demersum HOM05D000827 ORTHO05D001318 8.6e-06 53.9 40 60.0
CDE09G0627 Ceratophyllum demersum HOM05D000827 ORTHO05D001318 8.6e-06 53.9 41 61.0
COL.COLO4_32550 Corchorus olitorius HOM05D000827 ORTHO05D001318 8.6e-06 53.9 40 62.5
Lalb_Chr16g0380361 Lupinus albus HOM05D000827 ORTHO05D001318 8.6e-06 53.9 41 63.4
Nn5g30486 Nelumbo nucifera HOM05D000827 ORTHO05D001318 8.6e-06 53.9 40 60.0
Sp3g02570 Schrenkiella parvula HOM05D000827 ORTHO05D001318 8.6e-06 53.9 116 38.8
TAR376G0708 Trochodendron aralioides HOM05D000827 ORTHO05D001318 8.6e-06 53.9 40 60.0


User provided reference genes

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