Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu020235.1 Olea europaea HOM05D008143 ORTHO05D010256 7.4e-66 253.8 137 100.0
Dinv43993 Davidia involucrata HOM05D008143 ORTHO05D010256 6.5e-22 107.8 141 53.9
CAN.G700.4 Capsicum annuum HOM05D008143 ORTHO05D010256 1.1e-21 107.1 114 61.4
PGSC0003DMG400001819 Solanum tuberosum HOM05D008143 ORTHO05D010256 7.2e-21 104.4 73 80.8
Nitab4.5_0001209g0030 Nicotiana tabacum HOM05D008143 ORTHO05D010256 1.2e-20 103.6 147 53.1
Migut.N01814 Erythranthe guttata HOM05D008143 ORTHO05D010256 1.6e-20 103.2 69 82.6
Sopen01g032540 Solanum pennellii HOM05D008143 ORTHO05D010256 2.7e-20 102.4 73 80.8
Cc02_g26140 Coffea canephora HOM05D008143 ORTHO05D010256 1.0e-19 100.5 164 47.0
Solyc01g080950.3 Solanum lycopersicum HOM05D008143 ORTHO05D010256 2.3e-19 99.4 101 64.4
Migut.N01697 Erythranthe guttata HOM05D008143 ORTHO05D010256 3.0e-19 99.0 159 48.4
Peaxi162Scf01110g00012 Petunia axillaris HOM05D008143 ORTHO05D010256 2.0e-18 96.3 137 53.3
HanXRQChr01g0020571 Helianthus annuus HOM05D008143 ORTHO05D010256 2.6e-18 95.9 101 55.4
Dinv43549 Davidia involucrata HOM05D000307 ORTHO05D010256 3.4e-18 95.5 70 77.1
SGA_v2.0_scaffold4G02202 Striga asiatica HOM05D008143 ORTHO05D010256 1.3e-17 93.6 137 51.8
ECA248G2885 Erigeron canadensis HOM05D008143 ORTHO05D010256 6.3e-17 91.3 101 55.4
Hma1.2p1_0076F.1_g039560 Hydrangea macrophylla HOM05D008143 ORTHO05D010256 6.3e-17 91.3 154 50.0
CiPaw.14G012000 Carya illinoinensis HOM05D008143 ORTHO05D010256 8.3e-17 90.9 76 68.4
GSVIVG01026763001 Vitis vinifera HOM05D008143 ORTHO05D010256 8.3e-17 90.9 75 72.0
Dinv43557 Davidia involucrata HOM05D008143 ORTHO05D010256 1.1e-16 90.5 137 48.9
MSTRG.28120 Avicennia marina HOM05D008143 ORTHO05D010256 1.4e-16 90.1 137 50.4
Ca_26206_v3 Cicer arietinum L. HOM05D008143 ORTHO05D010256 5.3e-16 88.2 88 60.2
Medtr7g034335 Medicago truncatula HOM05D008143 ORTHO05D010256 9.1e-16 87.4 98 55.1
Atru.chr5.8 Acer truncatum HOM05D008143 ORTHO05D010256 2.7e-15 85.9 75 66.7
Lj1g0022952 Lotus japonicus HOM05D008143 ORTHO05D010256 5.9e-15 84.7 109 51.4
Sed0007849 Sechium edule HOM05D000473 ORTHO05D009707 1.0e-14 84.0 136 44.9
Ciclev10023977m.g Citrus clementina HOM05D008143 ORTHO05D010256 1.7e-14 83.2 78 65.4
QL04p024258 Quercus lobata HOM05D008143 ORTHO05D010256 1.7e-14 83.2 141 44.7
Aqoxy3G02407 Aquilegia oxysepala HOM05D008143 ORTHO05D010256 8.5e-14 80.9 99 50.5
SHI04152 Sapria himalayana HOM05D008143 ORTHO05D010256 1.1e-13 80.5 103 53.4
Glyma.06G310300 Glycine max HOM05D008143 ORTHO05D010256 1.5e-13 80.1 109 53.2
PGR042G2567 Punica granatum HOM05D008143 ORTHO05D010256 1.5e-13 80.1 88 54.5
Glyma.04G128500 Glycine max HOM05D008143 ORTHO05D010256 1.9e-13 79.7 91 57.1
Actinidia21604 Actinidia chinensis HOM05D008143 ORTHO05D010256 3.2e-13 79.0 101 51.5
Cpa.g.sc41.41 Carica papaya HOM05D008143 ORTHO05D010256 3.2e-13 79.0 104 51.9
Psat3g161880 Pisum sativum HOM05D008143 ORTHO05D010256 5.5e-13 78.2 91 54.9
arahy.Tifrunner.gnm1.ann1.H93UBA Arachis hypogaea HOM05D008143 ORTHO05D010256 1.2e-12 77.0 105 50.5
ClCG05G002660 Citrullus lanatus HOM05D008143 ORTHO05D010256 1.6e-12 76.6 76 64.5
MELO3C006232.2 Cucumis melo HOM05D008143 ORTHO05D010256 1.6e-12 76.6 76 64.5
arahy.Tifrunner.gnm1.ann1.3N3IDJ Arachis hypogaea HOM05D008143 ORTHO05D010256 2.1e-12 76.3 105 50.5
MD00G1098100 Malus domestica HOM05D008143 ORTHO05D010256 2.1e-12 76.3 103 52.4
Prupe.2G109300 Prunus persica HOM05D008143 ORTHO05D010256 2.1e-12 76.3 100 51.0
TWI59G0267 Tripterygium wilfordii HOM05D008143 ORTHO05D010256 2.1e-12 76.3 76 57.9
CsaV3_3G010110 Cucumis sativus L. HOM05D008143 ORTHO05D010256 3.6e-12 75.5 76 63.2
Duzib128G1063 Durio zibethinus HOM05D008143 ORTHO05D010256 4.7e-12 75.1 77 58.4
Sabra14G0137200 Salix brachista HOM05D008143 ORTHO05D010256 4.7e-12 75.1 107 48.6
TAR636G2193 Trochodendron aralioides HOM05D008143 ORTHO05D010256 6.1e-12 74.7 137 42.3
Sabra14G0139000 Salix brachista HOM05D008143 ORTHO05D010256 1.0e-11 73.9 87 55.2
DCAR_015763 Daucus carota HOM05D008143 ORTHO05D010256 3.0e-11 72.4 78 61.5
CiPaw.13G019200 Carya illinoinensis HOM05D008143 ORTHO05D010256 1.5e-10 70.1 103 50.5
FvH4_7g08030 Fragaria vesca HOM05D008143 ORTHO05D010256 2.0e-10 69.7 99 47.5
FAN01G0067 Fragaria x ananassa HOM05D008143 ORTHO05D010256 2.0e-10 69.7 99 47.5
FAN10G1551 Fragaria x ananassa HOM05D008143 ORTHO05D010256 2.0e-10 69.7 99 47.5
Thecc.10G157800 Theobroma cacao HOM05D008143 ORTHO05D010256 4.4e-10 68.6 77 55.8
Potri.014G178900 Populus trichocarpa HOM05D008143 ORTHO05D010256 5.7e-10 68.2 76 55.3
RcHm_v2.0_Chr1g0341271 Rosa chinensis HOM05D008143 ORTHO05D010256 9.8e-10 67.4 100 47.0
Sed0022797 Sechium edule HOM05D008143 ORTHO05D010256 9.8e-10 67.4 69 60.9
FAN03G3180 Fragaria x ananassa HOM05D008143 ORTHO05D010256 1.7e-09 66.6 99 45.5
Nn1g00548 Nelumbo nucifera HOM05D008143 ORTHO05D010256 2.2e-09 66.2 71 54.9
Lalb_Chr19g0126471 Lupinus albus HOM05D008143 ORTHO05D010256 8.3e-09 64.3 85 50.6
PSO017G2691 Papaver somniferum HOM05D008143 ORTHO05D010256 7.0e-08 61.2 69 53.6
Nn6g33614 Nelumbo nucifera HOM05D008143 ORTHO05D010256 9.1e-08 60.8 79 48.1
MD02G1236800 Malus domestica HOM05D008143 ORTHO05D010256 2.0e-07 59.7 45 71.1
AUR62023336 Chenopodium quinoa HOM05D008143 ORTHO05D010256 4.5e-07 58.5 57 64.9
Phvul.005G016300 Phaseolus vulgaris HOM05D008143 ORTHO05D010256 1.0e-06 57.4 99 40.4
Sabra05G0099100 Salix brachista HOM05D008143 ORTHO05D010256 1.3e-06 57.0 67 55.2


User provided reference genes

Program Settings