Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu020201.1 Olea europaea HOM05D002556 ORTHO05D003153 7.9e-103 377.1 188 100.0
Oeu022243.3 Olea europaea HOM05D002556 ORTHO05D003153 5.7e-53 211.5 151 71.5
Dinv38335 Davidia involucrata HOM05D002556 ORTHO05D003153 2.4e-22 109.8 165 41.8
Dinv44438 Davidia involucrata HOM05D002556 ORTHO05D003153 4.0e-22 109.0 153 44.4
Cc03_g02500 Coffea canephora HOM05D002556 ORTHO05D003153 1.6e-18 97.1 148 43.2
CSS0031733 Camellia sinensis var. sinensis HOM05D002556 ORTHO05D003153 2.1e-18 96.7 190 36.8
MSTRG.24773 Avicennia marina HOM05D002556 ORTHO05D003153 1.1e-16 90.9 150 42.7
CSS0029361 Camellia sinensis var. sinensis HOM05D002556 ORTHO05D003153 7.3e-16 88.2 165 38.8
CSS0044142 Camellia sinensis var. sinensis HOM05D002556 ORTHO05D003153 7.3e-16 88.2 165 38.8
Nitab4.5_0001624g0020 Nicotiana tabacum HOM05D002556 ORTHO05D003153 1.1e-14 84.3 154 40.3
Nitab4.5_0000303g0020 Nicotiana tabacum HOM05D002556 ORTHO05D003153 3.1e-14 82.8 177 36.2
Prupe.1G143500 Prunus persica HOM05D002556 ORTHO05D003153 4.0e-14 82.4 182 36.8
Solyc01g067790.3 Solanum lycopersicum HOM05D002556 ORTHO05D003153 4.0e-14 82.4 158 39.9
PGSC0003DMG400022845 Solanum tuberosum HOM05D002556 ORTHO05D003153 4.0e-14 82.4 175 36.6
Sopen01g029750 Solanum pennellii HOM05D002556 ORTHO05D003153 5.3e-14 82.0 158 39.2
Peaxi162Scf01067g00025 Petunia axillaris HOM05D002556 ORTHO05D003153 1.2e-13 80.9 152 40.8
vmacro15271 Vaccinium macrocarpon HOM05D002556 ORTHO05D003153 1.2e-13 80.9 164 36.6
MD16G1176700 Malus domestica HOM05D002556 ORTHO05D003153 3.4e-13 79.3 182 35.2
MD13G1175000 Malus domestica HOM05D002556 ORTHO05D003153 4.5e-13 79.0 184 37.0
TAR636G3468 Trochodendron aralioides HOM05D002556 ORTHO05D003153 4.5e-13 79.0 187 34.8
Actinidia40218 Actinidia chinensis HOM05D002556 ORTHO05D003153 7.6e-13 78.2 155 36.1
Nitab4.5_0006501g0050 Nicotiana tabacum HOM05D002556 ORTHO05D003153 2.2e-12 76.6 188 33.5
Rhsim02G0014300 Rhododendron simsii HOM05D002556 ORTHO05D003153 2.9e-12 76.3 155 36.8
Migut.N00129 Erythranthe guttata HOM05D002556 ORTHO05D003153 3.8e-12 75.9 92 45.7
Rhsim04G0215200 Rhododendron simsii HOM05D002556 ORTHO05D003153 3.8e-12 75.9 144 38.2
Lj6C667G18 Lonicera japonica HOM05D002556 ORTHO05D003153 8.4e-12 74.7 153 39.2
DCAR_024620 Daucus carota HOM05D002556 ORTHO05D003153 1.4e-11 73.9 150 38.7
Haze_01041 Corylus avellana HOM05D002556 ORTHO05D003153 1.9e-11 73.6 164 33.5
Actinidia23440 Actinidia chinensis HOM05D002556 ORTHO05D003153 5.4e-11 72.0 155 35.5
Cfa015509 Carpinus fangiana HOM05D002556 ORTHO05D003153 7.1e-11 71.6 183 32.2
Eucgr.B01260 Eucalyptus grandis HOM05D002556 ORTHO05D003153 7.1e-11 71.6 153 35.3
SGA_v2.0_scaffold371G50142 Striga asiatica HOM05D002556 ORTHO05D003153 7.1e-11 71.6 148 38.5
Hma1.2p1_0078F.1_g040880 Hydrangea macrophylla HOM05D002556 ORTHO05D003153 9.3e-11 71.2 153 37.3
GSVIVG01017825001 Vitis vinifera HOM05D002556 ORTHO05D003153 3.5e-10 69.3 155 38.1
DCAR_027119 Daucus carota HOM05D002556 ORTHO05D003153 1.0e-09 67.8 148 33.8
HanXRQChr13g0410841 Helianthus annuus HOM05D002556 ORTHO05D003153 1.8e-09 67.0 181 32.0
TWI09G1603 Tripterygium wilfordii HOM05D002556 ORTHO05D003153 1.8e-09 67.0 151 35.1
SalBow5G3428 Salvia bowleyana HOM05D002556 ORTHO05D003153 2.3e-09 66.6 192 33.3
SalBow5G3083 Salvia bowleyana HOM05D002556 ORTHO05D003153 3.9e-09 65.9 192 33.3
arahy.Tifrunner.gnm1.ann1.I12U39 Arachis hypogaea HOM05D002556 ORTHO05D003153 6.7e-09 65.1 147 33.3
Gohir.D10G165600 Gossypium hirsutum HOM05D002556 ORTHO05D003153 1.5e-08 63.9 145 35.9
Potri.010G014700 Populus trichocarpa HOM05D002556 ORTHO05D003153 1.5e-08 63.9 145 33.1
PGR031G1073 Punica granatum HOM05D002556 ORTHO05D003153 1.5e-08 63.9 185 30.8
vmacro08216 Vaccinium macrocarpon HOM05D002556 ORTHO05D003153 1.9e-08 63.5 153 35.9
Duzib212G1036 Durio zibethinus HOM05D002556 ORTHO05D003153 2.5e-08 63.2 184 32.1
ECA240G3552 Erigeron canadensis HOM05D002556 ORTHO05D003153 3.3e-08 62.8 183 36.1
Atru.chr4.2739 Acer truncatum HOM05D002556 ORTHO05D003153 4.3e-08 62.4 148 35.8
Gorai.011G184800 Gossypium raimondii HOM05D002556 ORTHO05D003153 5.6e-08 62.0 145 35.2
Sabra10G0010100 Salix brachista HOM05D002556 ORTHO05D003153 9.6e-08 61.2 144 33.3
arahy.Tifrunner.gnm1.ann1.CR3TYE Arachis hypogaea HOM05D002556 ORTHO05D003153 1.3e-07 60.8 183 31.1
Thecc.04G275500 Theobroma cacao HOM05D002556 ORTHO05D003153 1.3e-07 60.8 145 35.9
Duzib151G1179 Durio zibethinus HOM05D002556 ORTHO05D003153 1.6e-07 60.5 149 35.6
CiPaw.02G087500 Carya illinoinensis HOM05D002556 ORTHO05D003153 2.1e-07 60.1 183 32.2
Manes.03G190200 Manihot esculenta HOM05D002556 ORTHO05D003153 2.1e-07 60.1 181 30.9
RcHm_v2.0_Chr4g0420701 Rosa chinensis HOM05D002556 ORTHO05D003153 2.1e-07 60.1 145 35.2
Manes.15G018000 Manihot esculenta HOM05D002556 ORTHO05D003153 3.7e-07 59.3 177 32.2
Cpa.g.sc183.31 Carica papaya HOM05D002556 ORTHO05D003153 1.8e-06 57.0 147 34.0
COL.COLO4_13950 Corchorus olitorius HOM05D002556 ORTHO05D003153 2.4e-06 56.6 147 32.7
HanXRQChr03g0079431 Helianthus annuus HOM05D002556 ORTHO05D003153 3.1e-06 56.2 186 33.3
Hund20629 Selenicereus undatus HOM05D002556 ORTHO05D003153 3.1e-06 56.2 160 33.1


User provided reference genes

Program Settings