Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu020108.1 Olea europaea HOM05D007229 ORTHO05D009131 9.8e-95 350.1 178 100.0
MSTRG.27273 Avicennia marina HOM05D007229 ORTHO05D009131 8.6e-67 257.3 178 76.4
GSVIVG01032702001 Vitis vinifera HOM05D007229 ORTHO05D009131 6.2e-65 251.1 178 74.2
Thecc.10G183800 Theobroma cacao HOM05D007229 ORTHO05D009131 1.2e-63 246.9 177 76.3
Lj1A965T45 Lonicera japonica HOM05D007229 ORTHO05D009131 2.0e-63 246.1 184 69.0
Manes.10G004800 Manihot esculenta HOM05D007229 ORTHO05D009131 2.6e-63 245.7 180 74.4
Manes.07G139500 Manihot esculenta HOM05D007229 ORTHO05D009131 3.4e-63 245.4 176 74.4
Hma1.2p1_2086F.1_g313730 Hydrangea macrophylla HOM05D007229 ORTHO05D009131 4.9e-62 241.5 177 73.4
Peaxi162Scf00739g00125 Petunia axillaris HOM05D000154 ORTHO05D000092 4.9e-62 241.5 182 74.2
Sabra19G0072100 Salix brachista HOM05D007229 ORTHO05D009131 8.4e-62 240.7 179 73.7
Cc02_g05510 Coffea canephora HOM05D007229 ORTHO05D009131 1.4e-61 240.0 182 70.3
Rhsim09G0184500 Rhododendron simsii HOM05D007229 ORTHO05D009131 4.2e-61 238.4 179 70.9
Potri.019G056400 Populus trichocarpa HOM05D007229 ORTHO05D009131 7.1e-61 237.7 179 73.7
Dinv26059 Davidia involucrata HOM05D007229 ORTHO05D009131 9.3e-61 237.3 178 70.8
PGSC0003DMG400024310 Solanum tuberosum HOM05D007229 ORTHO05D009131 2.1e-60 236.1 184 73.4
PGR044G2361 Punica granatum HOM05D007229 ORTHO05D009131 2.7e-60 235.7 179 71.5
VMungo1309G1820 Vigna mungo HOM05D007229 ORTHO05D009131 2.7e-60 235.7 178 71.3
Lj1g0022940 Lotus japonicus HOM05D007229 ORTHO05D009131 6.0e-60 234.6 176 73.3
Haze_17350 Corylus avellana HOM05D000154 ORTHO05D000092 7.8e-60 234.2 179 71.5
SalBow3G2298 Salvia bowleyana HOM05D007229 ORTHO05D009131 7.8e-60 234.2 179 70.4
COL.COLO4_19452 Corchorus olitorius HOM05D007229 ORTHO05D009131 1.3e-59 233.4 178 71.9
TWI53G0143 Tripterygium wilfordii HOM05D007229 ORTHO05D009131 1.7e-59 233.0 175 68.0
Glyma.04G221700 Glycine max HOM05D007229 ORTHO05D009131 3.9e-59 231.9 176 69.9
SGA_v2.0_scaffold60G20901 Striga asiatica HOM05D007229 ORTHO05D009131 5.1e-59 231.5 176 69.9
Glyma.06G143700 Glycine max HOM05D007229 ORTHO05D009131 1.5e-58 229.9 176 69.3
Sopen06g015630 Solanum pennellii HOM05D007229 ORTHO05D009131 1.9e-58 229.6 186 69.9
Duzib114G0482 Durio zibethinus HOM05D007229 ORTHO05D009131 2.5e-58 229.2 177 68.4
Gohir.D04G011900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 2.5e-58 229.2 181 70.2
Lalb_Chr11g0067841 Lupinus albus HOM05D007229 ORTHO05D009131 2.5e-58 229.2 176 69.9
TAR369G0442 Trochodendron aralioides HOM05D007229 ORTHO05D009131 2.5e-58 229.2 178 66.9
Hund13463 Selenicereus undatus HOM05D007229 ORTHO05D009131 3.3e-58 228.8 180 66.1
arahy.Tifrunner.gnm1.ann1.I1HNZH Arachis hypogaea HOM05D007229 ORTHO05D009131 5.6e-58 228.0 181 67.4
arahy.Tifrunner.gnm1.ann1.B9ILCP Arachis hypogaea HOM05D007229 ORTHO05D009131 7.3e-58 227.6 182 68.1
Gohir.A05G403900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 7.3e-58 227.6 181 69.6
Phvul.009G142501 Phaseolus vulgaris HOM05D007229 ORTHO05D009131 7.3e-58 227.6 176 68.8
Gorai.012G014100 Gossypium raimondii HOM05D007229 ORTHO05D009131 9.6e-58 227.3 181 69.6
Actinidia00993 Actinidia chinensis HOM05D007229 ORTHO05D009131 3.6e-57 225.3 176 68.2
CAN.G55.3 Capsicum annuum HOM05D007229 ORTHO05D009131 3.6e-57 225.3 185 65.4
Solyc06g050170.4 Solanum lycopersicum HOM05D000154 ORTHO05D000092 8.1e-57 224.2 187 67.4
QL08p064765 Quercus lobata HOM05D007229 ORTHO05D009131 1.4e-56 223.4 178 66.9
Lsat_1_v5_gn_8_13541 Lactuca sativa HOM05D007229 ORTHO05D009131 1.8e-56 223.0 183 66.7
FvH4_7g25840 Fragaria vesca HOM05D007229 ORTHO05D009131 5.3e-56 221.5 181 65.7
FAN06G3440 Fragaria x ananassa HOM05D007229 ORTHO05D009131 5.3e-56 221.5 181 65.7
Medtr3g094080 Medicago truncatula HOM05D007229 ORTHO05D009131 5.3e-56 221.5 176 66.5
TPR.G16113 Trifolium pratense HOM05D007229 ORTHO05D009131 5.3e-56 221.5 176 64.8
BcaC08g44777 Brassica carinata HOM05D007229 ORTHO05D009131 6.9e-56 221.1 177 65.5
A07p22880 Brassica napus HOM05D007229 ORTHO05D009131 6.9e-56 221.1 177 65.5
BraA07t29954Z Brassica rapa HOM05D007229 ORTHO05D009131 6.9e-56 221.1 177 65.5
Sp5g06210 Schrenkiella parvula HOM05D007229 ORTHO05D009131 6.9e-56 221.1 177 66.7
BcaB01g00004 Brassica carinata HOM05D007229 ORTHO05D009131 9.0e-56 220.7 176 65.3
BcaB01g00005 Brassica carinata HOM05D007229 ORTHO05D009131 9.0e-56 220.7 176 65.3
A09p49260 Brassica napus HOM05D007229 ORTHO05D009131 2.0e-55 219.5 176 66.5
C06p23470 Brassica napus HOM05D007229 ORTHO05D009131 2.0e-55 219.5 177 65.5
BolC6t37520H Brassica oleracea HOM05D007229 ORTHO05D009131 2.0e-55 219.5 177 65.0
BraA09t40379Z Brassica rapa HOM05D007229 ORTHO05D009131 2.0e-55 219.5 176 66.5
CARHR166450 Cardamine hirsuta HOM05D007229 ORTHO05D009131 2.6e-55 219.2 179 64.8
AT3G56290 Arabidopsis thaliana HOM05D007229 ORTHO05D009131 7.6e-55 217.6 177 66.7
BcaC07g39946 Brassica carinata HOM05D007229 ORTHO05D009131 7.6e-55 217.6 177 65.5
C08p31620 Brassica napus HOM05D007229 ORTHO05D009131 7.6e-55 217.6 177 65.5
BolC8t50783H Brassica oleracea HOM05D007229 ORTHO05D009131 7.6e-55 217.6 177 65.5
Migut.F00594 Erythranthe guttata HOM05D007229 ORTHO05D009131 7.6e-55 217.6 200 60.5
Prupe.2G263300 Prunus persica HOM05D007229 ORTHO05D009131 7.6e-55 217.6 185 66.5
Sc14g0005610 Simmondsia chinensis HOM05D007229 ORTHO05D009131 7.6e-55 217.6 177 66.7
Carub.0005s2307 Capsella rubella HOM05D007229 ORTHO05D009131 9.9e-55 217.2 181 65.7
Ciclev10033477m.g Citrus clementina HOM05D007229 ORTHO05D009131 9.9e-55 217.2 177 67.2
RcHm_v2.0_Chr1g0372111 Rosa chinensis HOM05D007229 ORTHO05D009131 9.9e-55 217.2 182 66.5
CiPaw.01G306000 Carya illinoinensis HOM05D007229 ORTHO05D009131 2.2e-54 216.1 181 62.4
ECA233G6234 Erigeron canadensis HOM05D007229 ORTHO05D009131 2.2e-54 216.1 183 63.4
Duzib106G0259 Durio zibethinus HOM05D007229 ORTHO05D009131 2.9e-54 215.7 135 81.5
Psat5g069080 Pisum sativum HOM05D007229 ORTHO05D009131 2.9e-54 215.7 176 65.3
MD07G1232800 Malus domestica HOM05D007229 ORTHO05D009131 3.8e-54 215.3 178 64.0
MELO3C020131.2 Cucumis melo HOM05D007229 ORTHO05D009131 6.4e-54 214.5 145 74.5
MBI15_g35108_MAGBIO Magnolia biondii HOM05D007229 ORTHO05D009131 6.4e-54 214.5 179 65.4
PSO339G1638 Papaver somniferum HOM05D007229 ORTHO05D009131 6.4e-54 214.5 176 66.5
Cpa.g.sc19.82 Carica papaya HOM05D007229 ORTHO05D009131 8.4e-54 214.2 152 71.7
CDE12G0285 Ceratophyllum demersum HOM05D007229 ORTHO05D009131 8.4e-54 214.2 178 65.7
EL10Ac2g04250 Beta vulgaris HOM05D007229 ORTHO05D009131 1.1e-53 213.8 199 61.3
HanXRQChr08g0222581 Helianthus annuus HOM05D007229 ORTHO05D009131 1.1e-53 213.8 185 61.1
PSO384G2154 Papaver somniferum HOM05D007229 ORTHO05D009131 1.4e-53 213.4 176 66.5
Thhalv10006268m.g Eutrema salsugineum HOM05D007229 ORTHO05D009131 7.1e-53 211.1 179 65.4
CsaV3_5G010830 Cucumis sativus L. HOM05D007229 ORTHO05D009131 9.3e-53 210.7 135 78.5
THA.LOC104824356 Tarenaya hassleriana HOM05D007229 ORTHO05D009131 9.3e-53 210.7 122 86.9
AL5G37620 Arabidopsis lyrata HOM05D007229 ORTHO05D009131 1.6e-52 209.9 176 64.8
DCAR_019811 Daucus carota HOM05D007229 ORTHO05D009131 4.6e-52 208.4 123 81.3
Sed0026302 Sechium edule HOM05D007229 ORTHO05D009131 6.0e-52 208.0 140 75.0
AUR62012362 Chenopodium quinoa HOM05D007229 ORTHO05D009131 1.3e-51 206.8 176 63.1
ClCG07G004950 Citrullus lanatus HOM05D007229 ORTHO05D009131 1.3e-51 206.8 151 70.9
CSS0032880 Camellia sinensis var. sinensis HOM05D007229 ORTHO05D009131 3.0e-51 205.7 184 66.3
Aa31LG10G11190 Aethionema arabicum HOM05D007229 ORTHO05D009131 1.5e-50 203.4 184 62.5
Os01g0823600 Oryza sativa ssp. japonica HOM05D007229 ORTHO05D009131 8.1e-49 197.6 176 61.9
Aqoxy2G00722 Aquilegia oxysepala HOM05D007229 ORTHO05D009131 1.1e-48 197.2 196 61.7
BcaB02g07659 Brassica carinata HOM05D007229 ORTHO05D009131 9.0e-48 194.1 187 59.9
vmacro09972 Vaccinium macrocarpon HOM05D007229 ORTHO05D009131 7.6e-47 191.0 183 62.3
ATR0681G125 Amborella trichopoda HOM05D007229 ORTHO05D009131 9.9e-47 190.7 152 67.1
AUR62031491 Chenopodium quinoa HOM05D000154 ORTHO05D000092 1.3e-46 190.3 121 76.0
Nitab4.5_0003695g0030 Nicotiana tabacum HOM05D007229 ORTHO05D009131 1.3e-46 190.3 177 59.9
SEGI_31216 Sequoiadendron giganteum HOM05D007229 ORTHO05D009131 2.9e-46 189.1 131 69.5
HPP92_017919 Vanilla planifolia HOM05D007229 ORTHO05D009131 2.9e-46 189.1 132 68.9
Nitab4.5_0000109g0540 Nicotiana tabacum HOM05D000154 ORTHO05D009131 4.2e-45 185.3 182 57.7
Mapoly0032s0114 Marchantia polymorpha HOM05D007229 ORTHO05D009131 1.6e-41 173.3 120 67.5
Pp3c19_14460 Physcomitrium patens HOM05D007229 ORTHO05D009131 2.8e-41 172.6 121 68.6
SMO230G0076 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 1.3e-38 163.7 124 63.7
Ah.10g035980 Amaranthus hybridus HOM05D007229 ORTHO05D009131 7.4e-34 147.9 175 52.6
SMO230G0102 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 4.1e-32 142.1 103 65.0
SMO230G0113 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 4.1e-32 142.1 103 65.0
SabraUnG0004000 Salix brachista HOM05D007229 ORTHO05D009131 1.3e-30 137.1 123 68.3
Sed0009884 Sechium edule HOM05D007229 ORTHO05D009131 2.1e-28 129.8 136 53.7
Nn2g10342 Nelumbo nucifera HOM05D000154 ORTHO05D000092 1.7e-25 120.2 67 82.1
MD01G1165900 Malus domestica HOM05D000154 ORTHO05D000092 1.0e-22 110.9 58 84.5
Zm00001eb149430 Zea mays HOM05D007229 ORTHO05D009131 5.5e-21 105.1 120 55.8
AagrBONN_evm.TU.Sc2ySwM_344.3614 Anthoceros agrestis HOM05D007229 ORTHO05D009131 1.2e-20 104.0 113 49.6
FAN01G1364 Fragaria x ananassa HOM05D007229 ORTHO05D009131 2.2e-17 93.2 114 49.1
Eucgr.J00129 Eucalyptus grandis HOM05D007229 ORTHO05D009131 1.1e-08 64.3 96 49.0
Cre03.g144184 Chlamydomonas reinhardtii HOM05D007229 ORTHO05D009131 1.3e-06 57.4 67 50.7


User provided reference genes

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