Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu020066.1 Olea europaea HOM05D003750 ORTHO05D004337 1.4e-166 590.1 452 100.0
Oeu040027.1 Olea europaea HOM05D003750 ORTHO05D004337 1.6e-56 224.6 454 48.7
Peaxi162Scf00807g00024 Petunia axillaris HOM05D003750 ORTHO05D004337 9.9e-51 205.3 455 49.7
Nitab4.5_0002027g0180 Nicotiana tabacum HOM05D003750 ORTHO05D004337 4.9e-50 203.0 482 48.3
Actinidia11198 Actinidia chinensis HOM05D003750 ORTHO05D004337 6.6e-47 192.6 165 63.6
Nitab4.5_0006934g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 1.5e-46 191.4 144 70.8
Nitab4.5_0001675g0060 Nicotiana tabacum HOM05D003750 ORTHO05D004337 2.5e-46 190.7 454 37.4
Nitab4.5_0000446g0080 Nicotiana tabacum HOM05D003750 ORTHO05D004337 3.3e-46 190.3 428 50.2
Solyc12g011010.2 Solanum lycopersicum HOM05D003750 ORTHO05D004337 8.1e-45 185.7 118 77.1
Nitab4.5_0013539g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 1.1e-44 185.3 454 37.0
SGA_v2.0_scaffold70G23672 Striga asiatica HOM05D003750 ORTHO05D004337 1.4e-44 184.9 225 56.0
CAN.G585.54 Capsicum annuum HOM05D003750 ORTHO05D004337 2.4e-44 184.1 452 37.6
PGSC0003DMG400007796 Solanum tuberosum HOM05D003750 ORTHO05D004337 1.5e-43 181.4 118 75.4
CSS0030446 Camellia sinensis var. sinensis HOM05D003750 ORTHO05D004337 3.4e-43 180.3 123 72.4
Potri.002G060800 Populus trichocarpa HOM05D003750 ORTHO05D004337 3.4e-43 180.3 452 36.9
Haze_13489 Corylus avellana HOM05D003750 ORTHO05D004337 4.5e-43 179.9 143 69.9
MSTRG.6755 Avicennia marina HOM05D003750 ORTHO05D004337 7.6e-43 179.1 513 54.2
PGSC0003DMG400017342 Solanum tuberosum HOM05D003750 ORTHO05D004337 7.6e-43 179.1 117 76.1
Cc05_g09310 Coffea canephora HOM05D003750 ORTHO05D004337 9.9e-43 178.7 449 43.0
QL08p043924 Quercus lobata HOM05D003750 ORTHO05D004337 1.3e-42 178.3 122 73.8
Peaxi162Scf00688g00432 Petunia axillaris HOM05D003750 ORTHO05D004337 2.2e-42 177.6 469 36.7
Prupe.3G171000 Prunus persica HOM05D003750 ORTHO05D004337 2.2e-42 177.6 457 38.9
vmacro12451 Vaccinium macrocarpon HOM05D003750 ORTHO05D004337 2.9e-42 177.2 251 49.4
Rhsim06G0118400 Rhododendron simsii HOM05D003750 ORTHO05D004337 6.4e-42 176.0 173 66.5
Solyc07g055950.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 8.4e-42 175.6 117 75.2
Sopen07g029310 Solanum pennellii HOM05D003750 ORTHO05D004337 8.4e-42 175.6 117 75.2
PGSC0003DMG400021281 Solanum tuberosum HOM05D003750 ORTHO05D004337 1.9e-41 174.5 119 73.1
Sopen10g003700 Solanum pennellii HOM05D003750 ORTHO05D004337 2.4e-41 174.1 121 71.9
Solyc10g007800.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 4.2e-41 173.3 121 71.9
Migut.M00516 Erythranthe guttata HOM05D003750 ORTHO05D004337 7.1e-41 172.6 119 72.3
ClCG09G022350 Citrullus lanatus HOM05D003750 ORTHO05D004337 1.6e-40 171.4 143 62.9
Lsat_1_v5_gn_3_35901 Lactuca sativa HOM05D003750 ORTHO05D004337 1.6e-40 171.4 143 62.9
Cfa022914 Carpinus fangiana HOM05D003750 ORTHO05D004337 2.1e-40 171.0 121 69.4
CiPaw.03G189300 Carya illinoinensis HOM05D003750 ORTHO05D004337 2.1e-40 171.0 202 55.0
CAN.G164.22 Capsicum annuum HOM05D003750 ORTHO05D004337 4.6e-40 169.9 230 59.1
arahy.Tifrunner.gnm1.ann1.Y7JGW6 Arachis hypogaea HOM05D003750 ORTHO05D004337 6.0e-40 169.5 147 61.9
Nitab4.5_0001402g0030 Nicotiana tabacum HOM05D003750 ORTHO05D004337 6.0e-40 169.5 488 47.3
arahy.Tifrunner.gnm1.ann1.UWZ29M Arachis hypogaea HOM05D003750 ORTHO05D004337 7.9e-40 169.1 147 61.9
RcHm_v2.0_Chr2g0151161 Rosa chinensis HOM05D003750 ORTHO05D004337 7.9e-40 169.1 121 70.2
Glyma.02G287400 Glycine max HOM05D003750 ORTHO05D004337 1.0e-39 168.7 121 69.4
Sopen12g006370 Solanum pennellii HOM05D003750 ORTHO05D004337 3.0e-39 167.2 443 56.9
MSTRG.15053 Avicennia marina HOM05D003750 ORTHO05D004337 3.9e-39 166.8 120 72.5
HanXRQChr06g0171371 Helianthus annuus HOM05D003750 ORTHO05D004337 8.7e-39 165.6 124 66.9
SalBow7G0202 Salvia bowleyana HOM05D003750 ORTHO05D004337 8.7e-39 165.6 128 66.4
TWI14G1010 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 8.7e-39 165.6 121 68.6
Ciclev10032169m.g Citrus clementina HOM05D003750 ORTHO05D004337 1.1e-38 165.2 145 63.4
Gorai.012G041900 Gossypium raimondii HOM05D003750 ORTHO05D004337 1.1e-38 165.2 147 61.2
Sabra05G0152900 Salix brachista HOM05D003750 ORTHO05D004337 1.1e-38 165.2 144 61.8
Manes.01G128300 Manihot esculenta HOM05D003750 ORTHO05D004337 1.9e-38 164.5 118 69.5
CAN.G1191.4 Capsicum annuum HOM05D003750 ORTHO05D004337 2.5e-38 164.1 163 65.6
Glyma.14G027551 Glycine max HOM05D003750 ORTHO05D004337 2.5e-38 164.1 118 68.6
Gohir.D04G037100 Gossypium hirsutum HOM05D003750 ORTHO05D004337 2.5e-38 164.1 147 60.5
Lalb_Chr04g0248731 Lupinus albus HOM05D003750 ORTHO05D004337 2.5e-38 164.1 120 67.5
Sabra02G0049300 Salix brachista HOM05D003750 ORTHO05D004337 2.5e-38 164.1 221 58.4
Gohir.A05G378400 Gossypium hirsutum HOM05D003750 ORTHO05D004337 3.3e-38 163.7 147 60.5
Phvul.008G190900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 4.3e-38 163.3 121 67.8
CANSAT64G2056 Cannabis sativa HOM05D003750 ORTHO05D004337 5.6e-38 162.9 112 67.9
Duzib264G0293 Durio zibethinus HOM05D003750 ORTHO05D004337 5.6e-38 162.9 113 70.8
FAN02G2641 Fragaria x ananassa HOM05D003750 ORTHO05D004337 5.6e-38 162.9 121 69.4
FAN05G3098 Fragaria x ananassa HOM05D003750 ORTHO05D004337 7.4e-38 162.5 236 53.0
PGR142G2515 Punica granatum HOM05D003750 ORTHO05D004337 7.4e-38 162.5 213 59.2
SalBow7G1469 Salvia bowleyana HOM05D003750 ORTHO05D004337 7.4e-38 162.5 118 68.6
VMungo0647G1422 Vigna mungo HOM05D003750 ORTHO05D004337 7.4e-38 162.5 121 66.9
MD09G1154000 Malus domestica HOM05D003750 ORTHO05D004337 9.6e-38 162.2 121 69.4
Lalb_Chr17g0348311 Lupinus albus HOM05D003750 ORTHO05D004337 2.1e-37 161.0 121 66.1
TWI59G1023 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 2.8e-37 160.6 124 66.9
TAR626G1101 Trochodendron aralioides HOM05D003750 ORTHO05D004337 2.8e-37 160.6 455 39.6
CsaV3_6G038000 Cucumis sativus L. HOM05D003750 ORTHO05D004337 3.7e-37 160.2 113 67.3
Duzib187G0136 Durio zibethinus HOM05D003750 ORTHO05D004337 3.7e-37 160.2 118 66.9
Eucgr.K01198 Eucalyptus grandis HOM05D003750 ORTHO05D004337 3.7e-37 160.2 443 41.3
FvH4_6g38100 Fragaria vesca HOM05D003750 ORTHO05D004337 3.7e-37 160.2 119 68.9
Cpa.g.sc50.77 Carica papaya HOM05D003750 ORTHO05D004337 4.8e-37 159.8 118 67.8
Nn3g20965 Nelumbo nucifera HOM05D003750 ORTHO05D004337 4.8e-37 159.8 125 67.2
Peaxi162Scf00035g00302 Petunia axillaris HOM05D003750 ORTHO05D004337 4.8e-37 159.8 457 49.0
Phvul.006G033900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 4.8e-37 159.8 142 63.4
Psat0s4925g0080 Pisum sativum HOM05D003750 ORTHO05D004337 4.8e-37 159.8 216 52.8
Potri.005G200900 Populus trichocarpa HOM05D003750 ORTHO05D004337 8.1e-37 159.1 453 39.1
unitig_899.g15337 Utricularia gibba HOM05D003750 ORTHO05D004337 8.1e-37 159.1 112 65.2
ECA246G0286 Erigeron canadensis HOM05D003750 ORTHO05D004337 1.4e-36 158.3 237 50.6
Psat2g014640 Pisum sativum HOM05D003750 ORTHO05D004337 1.8e-36 157.9 167 56.9
TAR624G1252 Trochodendron aralioides HOM05D002606 ORTHO05D003016 1.8e-36 157.9 145 60.0
Duzib147G0801 Durio zibethinus HOM05D003750 ORTHO05D004337 2.4e-36 157.5 113 69.0
LjContig00310g0001182 Lotus japonicus HOM05D003750 ORTHO05D004337 2.4e-36 157.5 123 64.2
Medtr3g089570 Medicago truncatula HOM05D003750 ORTHO05D004337 2.4e-36 157.5 113 66.4
FAN14G5523 Fragaria x ananassa HOM05D003750 ORTHO05D004337 3.1e-36 157.1 119 68.1
Lj6g0002200 Lotus japonicus HOM05D003750 ORTHO05D004337 3.1e-36 157.1 111 66.7
unitig_46.g18277 Utricularia gibba HOM05D003750 ORTHO05D004337 3.1e-36 157.1 115 62.6
Dinv12695 Davidia involucrata HOM05D003750 ORTHO05D004337 4.0e-36 156.8 143 65.7
Atru.chr6.1510 Acer truncatum HOM05D003750 ORTHO05D004337 5.3e-36 156.4 117 65.0
unitig_37.g12854 Utricularia gibba HOM05D003750 ORTHO05D004337 9.0e-36 155.6 110 65.5
Glyma.08G309700 Glycine max HOM05D003750 ORTHO05D004337 1.2e-35 155.2 121 65.3
Migut.H02092 Erythranthe guttata HOM05D003750 ORTHO05D004337 1.5e-35 154.8 117 63.2
Lalb_Chr10g0106741 Lupinus albus HOM05D003750 ORTHO05D004337 2.0e-35 154.5 119 63.9
Ca_27365_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 2.6e-35 154.1 124 63.7
Lalb_Chr20g0108881 Lupinus albus HOM05D003750 ORTHO05D004337 3.4e-35 153.7 121 66.1
TPR.G12519 Trifolium pratense HOM05D003750 ORTHO05D004337 3.4e-35 153.7 121 62.8
unitig_747.g21612 Utricularia gibba HOM05D003750 ORTHO05D004337 3.4e-35 153.7 237 42.6
MELO3C019689.2 Cucumis melo HOM05D003750 ORTHO05D004337 4.5e-35 153.3 114 66.7
MD17G1140600 Malus domestica HOM05D003750 ORTHO05D004337 5.8e-35 152.9 248 51.6
Thecc.01G160900 Theobroma cacao HOM05D003750 ORTHO05D004337 5.8e-35 152.9 113 66.4
VMungo0540G2251 Vigna mungo HOM05D003750 ORTHO05D004337 5.8e-35 152.9 228 50.9
MELO3C014462.2 Cucumis melo HOM05D003750 ORTHO05D004337 1.0e-34 152.1 153 54.9
MBI07_g30204_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 1.0e-34 152.1 164 57.3
THA.LOC104803179 Tarenaya hassleriana HOM05D003750 ORTHO05D004337 1.0e-34 152.1 206 54.9
Sed0024619 Sechium edule HOM05D003750 ORTHO05D004337 1.3e-34 151.8 143 55.9
Glyma.18G106400 Glycine max HOM05D003750 ORTHO05D004337 1.7e-34 151.4 201 53.2
Sed0014259 Sechium edule HOM05D003750 ORTHO05D004337 1.7e-34 151.4 115 64.3
ClCG02G018380 Citrullus lanatus HOM05D003750 ORTHO05D004337 2.2e-34 151.0 114 64.0
arahy.Tifrunner.gnm1.ann1.ZP8MLZ Arachis hypogaea HOM05D003750 ORTHO05D004337 2.9e-34 150.6 227 52.4
CsaV3_6G015810 Cucumis sativus L. HOM05D003750 ORTHO05D004337 4.9e-34 149.8 204 54.4
DCAR_021309 Daucus carota HOM05D003750 ORTHO05D004337 6.4e-34 149.4 127 62.2
C04p03840 Brassica napus HOM05D003750 ORTHO05D004337 1.1e-33 148.7 148 56.8
BolC4t22020H Brassica oleracea HOM05D003750 ORTHO05D004337 1.1e-33 148.7 148 56.8
Nn6g34390 Nelumbo nucifera HOM05D003750 ORTHO05D004337 1.1e-33 148.7 223 54.7
DCAR_009794 Daucus carota HOM05D003750 ORTHO05D004337 1.4e-33 148.3 143 56.6
COL.COLO4_33737 Corchorus olitorius HOM05D003750 ORTHO05D004337 1.9e-33 147.9 453 41.7
unitig_62.g23108 Utricularia gibba HOM05D003750 ORTHO05D004337 3.2e-33 147.1 137 52.6
Lalb_Chr19g0137861 Lupinus albus HOM05D003750 ORTHO05D004337 4.2e-33 146.7 216 55.6
AL4G41450 Arabidopsis lyrata HOM05D003750 ORTHO05D004337 5.5e-33 146.4 160 60.0
BcaB06g29267 Brassica carinata HOM05D003750 ORTHO05D004337 7.1e-33 146.0 169 56.8
Thhalv10016927m.g Eutrema salsugineum HOM05D003750 ORTHO05D004337 7.1e-33 146.0 444 39.6
CARHR137920 Cardamine hirsuta HOM05D003750 ORTHO05D004337 9.3e-33 145.6 119 65.5
arahy.Tifrunner.gnm1.ann1.N94NTJ Arachis hypogaea HOM05D003750 ORTHO05D004337 1.2e-32 145.2 107 65.4
BcaC02g07218 Brassica carinata HOM05D003750 ORTHO05D004337 1.2e-32 145.2 120 65.0
A04p32410 Brassica napus HOM05D003750 ORTHO05D004337 1.2e-32 145.2 120 65.0
C04p69930 Brassica napus HOM05D003750 ORTHO05D004337 1.2e-32 145.2 120 65.0
BolC4t28493H Brassica oleracea HOM05D003750 ORTHO05D004337 1.2e-32 145.2 120 65.0
BraA04t18694Z Brassica rapa HOM05D003750 ORTHO05D004337 1.2e-32 145.2 120 65.0
Aa31LG1G24600 Aethionema arabicum HOM05D003750 ORTHO05D004337 2.1e-32 144.4 120 64.2
DCAR_016898 Daucus carota HOM05D003750 ORTHO05D004337 2.3e-31 141.0 142 55.6
TPR.G16759 Trifolium pratense HOM05D003750 ORTHO05D004337 3.9e-31 140.2 107 65.4
PSO675G0845 Papaver somniferum HOM05D003750 ORTHO05D004337 5.1e-31 139.8 128 60.9
Sed0013297 Sechium edule HOM05D003750 ORTHO05D004337 6.7e-31 139.4 114 58.8
AT2G42840 Arabidopsis thaliana HOM05D003750 ORTHO05D004337 8.7e-31 139.0 453 40.4
Carub.0004s2528 Capsella rubella HOM05D003750 ORTHO05D004337 8.7e-31 139.0 445 42.9
PSO541G0678 Papaver somniferum HOM05D003750 ORTHO05D004337 8.7e-31 139.0 128 60.9
Sc15g0002430 Simmondsia chinensis HOM05D003750 ORTHO05D004337 8.7e-31 139.0 119 58.0
AUR62015148 Chenopodium quinoa HOM05D003750 ORTHO05D004337 5.7e-30 136.3 109 60.6
Aqoxy4G00176 Aquilegia oxysepala HOM05D003750 ORTHO05D004337 7.4e-30 136.0 118 61.9
ATR0737G120 Amborella trichopoda HOM05D003750 ORTHO05D004337 1.6e-29 134.8 114 59.6
Lsat_1_v5_gn_4_26620 Lactuca sativa HOM05D003750 ORTHO05D004337 1.6e-29 134.8 122 59.8
MBI06_g20684_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 2.1e-29 134.4 120 58.3
A05p03190 Brassica napus HOM05D003750 ORTHO05D004337 2.8e-29 134.0 469 48.4
Os01g0726700 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 3.7e-29 133.7 116 57.8
BcaNung06740 Brassica carinata HOM05D003750 ORTHO05D004337 6.2e-29 132.9 472 46.8
BraA05t19309Z Brassica rapa HOM05D003750 ORTHO05D004337 6.2e-29 132.9 469 48.2
Hund08216 Selenicereus undatus HOM05D003750 ORTHO05D004337 6.2e-29 132.9 121 55.4
Ah.01g001950 Amaranthus hybridus HOM05D003750 ORTHO05D004337 4.0e-28 130.2 111 56.8
CDE09G1130 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 2.0e-27 127.9 120 54.2
EL10Ac9g22858 Beta vulgaris HOM05D003750 ORTHO05D004337 2.6e-27 127.5 107 57.9
Sp4g24960 Schrenkiella parvula HOM05D003750 ORTHO05D004337 2.6e-27 127.5 447 44.1
Ah.01g013400 Amaranthus hybridus HOM05D003750 ORTHO05D004337 5.8e-27 126.3 108 57.4
Eucgr.A01963 Eucalyptus grandis HOM05D003750 ORTHO05D004337 5.8e-27 126.3 125 58.4
Ca_06287_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 2.9e-26 124.0 96 68.8
Zm00001eb154370 Zea mays HOM05D003750 ORTHO05D004337 4.9e-26 123.2 142 52.8
HanXRQChr17g0565481 Helianthus annuus HOM05D003750 ORTHO05D004337 6.5e-26 122.9 113 59.3
HanXRQChr17g0565411 Helianthus annuus HOM05D003750 ORTHO05D004337 8.4e-26 122.5 115 58.3
HanXRQChr17g0565191 Helianthus annuus HOM05D003750 ORTHO05D004337 1.1e-25 122.1 115 58.3
HanXRQChr17g0565441 Helianthus annuus HOM05D003750 ORTHO05D004337 1.1e-25 122.1 115 58.3
HanXRQChr17g0565471 Helianthus annuus HOM05D003750 ORTHO05D004337 1.1e-25 122.1 115 58.3
CDE02G2915 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 7.1e-25 119.4 113 54.0
unitig_85.g27387 Utricularia gibba HOM05D003750 ORTHO05D004337 1.2e-24 118.6 102 56.9
Glyma.02G280550 Glycine max HOM05D003750 ORTHO05D004337 2.7e-24 117.5 111 56.8
HPP92_009096 Vanilla planifolia HOM05D003750 ORTHO05D004337 1.0e-23 115.5 107 55.1
ECA234G0795 Erigeron canadensis HOM05D001021 ORTHO05D000894 3.0e-23 114.0 109 56.9
AUR62017604 Chenopodium quinoa HOM05D003750 ORTHO05D004337 8.7e-23 112.5 90 55.6
HanXRQChr01g0028591 Helianthus annuus HOM05D003750 ORTHO05D004337 3.7e-21 107.1 120 52.5
Zm00001eb239390 Zea mays HOM05D003750 ORTHO05D004337 2.4e-20 104.4 106 50.9
Zm00001eb278420 Zea mays HOM05D003750 ORTHO05D004337 5.5e-17 93.2 132 44.7
SEGI_25228 Sequoiadendron giganteum HOM05D003750 ORTHO05D004337 6.1e-16 89.7 109 45.9
Zm00001eb120700 Zea mays HOM05D003750 ORTHO05D004337 7.9e-16 89.4 140 44.3
Zm00001eb277660 Zea mays HOM05D003750 ORTHO05D004337 2.3e-15 87.8 108 50.9
Zm00001eb384740 Zea mays HOM05D003750 ORTHO05D004337 3.0e-15 87.4 105 48.6
Pp3c4_16960 Physcomitrium patens HOM05D003750 ORTHO05D004337 1.1e-12 79.0 116 42.2
Os02g0230300 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 1.5e-11 75.1 67 55.2
SEGI_36288 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 1.3e-10 72.0 114 37.7
SEGI_24140 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 1.9e-09 68.2 113 35.4
AagrBONN_evm.TU.Sc2ySwM_228.4867 Anthoceros agrestis HOM05D003750 ORTHO05D004337 1.6e-08 65.1 108 37.0
Hma1.2p1_0073F.1_g038610 Hydrangea macrophylla HOM05D003750 ORTHO05D004337 6.1e-08 63.2 29 79.3
Pp3c11_23110 Physcomitrium patens HOM05D003750 ORTHO05D004337 3.9e-07 60.5 115 36.5
TPR.G40574 Trifolium pratense HOM05D003750 ORTHO05D004337 3.9e-07 60.5 40 57.5
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 1.1e-06 58.9 103 38.8
Mapoly0090s0021 Marchantia polymorpha HOM05D021038 ORTHO05D009018 2.0e-06 58.2 101 36.6
Mapoly0037s0134 Marchantia polymorpha HOM05D007363 ORTHO05D009018 4.4e-06 57.0 107 38.3
Rhsim06G0118300 Rhododendron simsii HOM05D003750 ORTHO05D004337 7.4e-06 56.2 53 50.9


User provided reference genes

Program Settings