Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu019999.1 Olea europaea HOM05D001099 ORTHO05D000958 2.7e-67 258.5 126 100.0
Oeu038321.1 Olea europaea HOM05D001099 ORTHO05D000958 3.3e-44 181.8 123 75.6
Peaxi162Scf00002g00191 Petunia axillaris HOM05D001099 ORTHO05D000958 3.0e-29 132.1 122 59.8
Nitab4.5_0007598g0030 Nicotiana tabacum HOM05D001099 ORTHO05D000958 4.3e-28 128.3 122 58.2
Nitab4.5_0000312g0130 Nicotiana tabacum HOM05D001099 ORTHO05D000958 9.6e-28 127.1 122 57.4
CAN.G1367.3 Capsicum annuum HOM05D001099 ORTHO05D000958 1.6e-27 126.3 121 54.5
CAN.G164.15 Capsicum annuum HOM05D001099 ORTHO05D000958 6.2e-27 124.4 121 52.9
Dinv21632 Davidia involucrata HOM05D001099 ORTHO05D000958 1.4e-26 123.2 123 55.3
CAN.G1367.2 Capsicum annuum HOM05D001099 ORTHO05D000958 2.4e-26 122.5 121 55.4
Lsat_1_v5_gn_3_481 Lactuca sativa HOM05D001099 ORTHO05D000958 7.6e-25 117.5 124 51.6
Actinidia02128 Actinidia chinensis HOM05D001099 ORTHO05D000958 1.3e-24 116.7 123 50.4
TAR082G0002 Trochodendron aralioides HOM05D001099 ORTHO05D000958 2.2e-24 115.9 123 51.2
MELO3C013945.2 Cucumis melo HOM05D001099 ORTHO05D000958 2.9e-24 115.5 124 54.0
ClCG04G005380 Citrullus lanatus HOM05D001099 ORTHO05D000958 1.9e-23 112.8 121 52.1
ClCG10G002740 Citrullus lanatus HOM05D001099 ORTHO05D000958 1.9e-23 112.8 121 52.9
MELO3C013946.2 Cucumis melo HOM05D001099 ORTHO05D000958 1.9e-23 112.8 124 51.6
CiPaw.12G109200 Carya illinoinensis HOM05D001099 ORTHO05D000958 2.4e-23 112.5 123 51.2
CsaV3_3G002770 Cucumis sativus L. HOM05D001099 ORTHO05D000958 5.4e-23 111.3 124 52.4
Sopen08g027180 Solanum pennellii HOM05D001099 ORTHO05D000958 5.4e-23 111.3 124 54.0
PGSC0003DMG400004808 Solanum tuberosum HOM05D001099 ORTHO05D000958 7.1e-23 110.9 124 54.0
Cfa012707 Carpinus fangiana HOM05D001099 ORTHO05D000958 1.2e-22 110.2 123 51.2
Solyc08g078700.2 Solanum lycopersicum HOM05D001099 ORTHO05D000958 1.6e-22 109.8 108 57.4
HanXRQChr03g0088611 Helianthus annuus HOM05D001099 ORTHO05D000958 2.1e-22 109.4 125 48.8
PGR031G0040 Punica granatum HOM05D001099 ORTHO05D000958 2.1e-22 109.4 124 53.2
Haze_07927 Corylus avellana HOM05D001099 ORTHO05D000958 1.3e-21 106.7 116 50.0
Cc08_g12550 Coffea canephora HOM05D001099 ORTHO05D000958 2.3e-21 105.9 123 49.6
QL12p012417 Quercus lobata HOM05D001099 ORTHO05D000958 2.3e-21 105.9 123 49.6
Atru.chr9.1326 Acer truncatum HOM05D001099 ORTHO05D000958 5.1e-21 104.8 125 45.6
Actinidia14437 Actinidia chinensis HOM05D001099 ORTHO05D000958 6.6e-21 104.4 123 48.8
ECA240G1483 Erigeron canadensis HOM05D001099 ORTHO05D000958 6.6e-21 104.4 109 54.1
Eucgr.D02073 Eucalyptus grandis HOM05D001099 ORTHO05D000958 1.5e-20 103.2 125 51.2
Hund14531 Selenicereus undatus HOM05D001099 ORTHO05D000958 1.5e-20 103.2 121 51.2
CsaV3_3G002780 Cucumis sativus L. HOM05D001099 ORTHO05D000958 5.6e-20 101.3 105 53.3
Prupe.5G071200 Prunus persica HOM05D001099 ORTHO05D000958 7.3e-20 100.9 124 47.6
RcHm_v2.0_Chr7g0203041 Rosa chinensis HOM05D001099 ORTHO05D000958 1.3e-19 100.1 135 45.2
Nn1g01033 Nelumbo nucifera HOM05D001099 ORTHO05D000958 3.6e-19 98.6 124 46.8
PSO782G2285 Papaver somniferum HOM05D001099 ORTHO05D000958 3.6e-19 98.6 120 45.8
FvH4_5g18720 Fragaria vesca HOM05D001099 ORTHO05D000958 8.1e-19 97.4 136 44.9
FAN18G3089 Fragaria x ananassa HOM05D001099 ORTHO05D000958 8.1e-19 97.4 136 44.9
Eucgr.E00433 Eucalyptus grandis HOM05D001099 ORTHO05D000958 1.4e-18 96.7 125 48.8
TWI81G0609 Tripterygium wilfordii HOM05D001099 ORTHO05D000958 1.8e-18 96.3 129 45.0
GSVIVG01018654001 Vitis vinifera HOM05D001099 ORTHO05D000958 1.8e-18 96.3 124 46.8
Thecc.03G252700 Theobroma cacao HOM05D001099 ORTHO05D000958 2.4e-18 95.9 124 46.8
COL.COLO4_37189 Corchorus olitorius HOM05D001099 ORTHO05D000958 6.9e-18 94.4 124 46.8
Nn6g33979 Nelumbo nucifera HOM05D001099 ORTHO05D000958 2.0e-17 92.8 89 53.9
FAN08G3558 Fragaria x ananassa HOM05D001099 ORTHO05D000958 5.8e-17 91.3 135 41.5
Gohir.D08G189200 Gossypium hirsutum HOM05D001099 ORTHO05D000958 7.6e-17 90.9 119 47.1
Sc01g0008520 Simmondsia chinensis HOM05D001099 ORTHO05D000958 7.6e-17 90.9 121 49.6
CSS0016514 Camellia sinensis var. sinensis HOM05D001099 ORTHO05D000958 1.3e-16 90.1 123 47.2
Gorai.004G199300 Gossypium raimondii HOM05D001099 ORTHO05D000958 1.3e-16 90.1 119 46.2
CANSAT56G2602 Cannabis sativa HOM05D001099 ORTHO05D000958 1.7e-16 89.7 127 45.7
Ca_19626_v3 Cicer arietinum L. HOM05D001099 ORTHO05D000958 2.2e-16 89.4 124 51.6
vmacro06798 Vaccinium macrocarpon HOM05D001099 ORTHO05D000958 2.2e-16 89.4 123 46.3
MBI05_g10091_MAGBIO Magnolia biondii HOM05D001099 ORTHO05D000958 8.4e-16 87.4 125 48.0
arahy.Tifrunner.gnm1.ann1.TQI4QJ Arachis hypogaea HOM05D001099 ORTHO05D000958 1.1e-15 87.0 123 48.8
CARHR232600 Cardamine hirsuta HOM05D001099 ORTHO05D000958 1.1e-15 87.0 125 45.6
Sed0013728 Sechium edule HOM05D001099 ORTHO05D000958 1.1e-15 87.0 122 47.5
Thhalv10026232m.g Eutrema salsugineum HOM05D001099 ORTHO05D000958 1.4e-15 86.7 127 46.5
MD06G1060300 Malus domestica HOM05D001099 ORTHO05D000958 1.4e-15 86.7 127 42.5
Manes.06G134700 Manihot esculenta HOM05D001099 ORTHO05D000958 1.4e-15 86.7 124 46.0
BcaNung06351 Brassica carinata HOM05D001099 ORTHO05D000958 1.9e-15 86.3 127 44.9
CANSAT56G3256 Cannabis sativa HOM05D001099 ORTHO05D000958 1.9e-15 86.3 127 44.9
Phvul.011G016100 Phaseolus vulgaris HOM05D001099 ORTHO05D000958 1.9e-15 86.3 121 49.6
Hund11593 Selenicereus undatus HOM05D001099 ORTHO05D000958 2.4e-15 85.9 124 45.2
arahy.Tifrunner.gnm1.ann1.PCT7KU Arachis hypogaea HOM05D001099 ORTHO05D000958 3.2e-15 85.5 123 48.0
A01p16470 Brassica napus HOM05D001099 ORTHO05D000958 3.2e-15 85.5 127 44.9
BraA01t01601Z Brassica rapa HOM05D001099 ORTHO05D000958 3.2e-15 85.5 127 44.9
Manes.14G036000 Manihot esculenta HOM05D001099 ORTHO05D000958 4.2e-15 85.1 124 45.2
VMungo1127G1536 Vigna mungo HOM05D001099 ORTHO05D000958 4.2e-15 85.1 121 45.5
EL10Ac5g13076 Beta vulgaris HOM05D001099 ORTHO05D000958 5.4e-15 84.7 119 41.2
Cpa.g.sc3.323 Carica papaya HOM05D001099 ORTHO05D000958 5.4e-15 84.7 127 45.7
BcaC09g50798 Brassica carinata HOM05D001099 ORTHO05D000958 9.3e-15 84.0 127 44.1
C01p20640 Brassica napus HOM05D001099 ORTHO05D000958 9.3e-15 84.0 127 44.1
BolC1t01993H Brassica oleracea HOM05D001099 ORTHO05D000958 9.3e-15 84.0 127 44.1
Potri.003G076000 Populus trichocarpa HOM05D001099 ORTHO05D000958 9.3e-15 84.0 132 43.9
Dinv28574 Davidia involucrata HOM05D001099 ORTHO05D000958 1.2e-14 83.6 121 44.6
Thecc.03G155700 Theobroma cacao HOM05D001099 ORTHO05D000958 1.6e-14 83.2 125 44.8
Carub.0007s1583 Capsella rubella HOM05D001099 ORTHO05D000958 2.1e-14 82.8 127 44.1
Glyma.12G013100 Glycine max HOM05D001099 ORTHO05D000958 2.1e-14 82.8 125 48.0
CDE03G0474 Ceratophyllum demersum HOM05D001099 ORTHO05D000958 3.5e-14 82.0 118 40.7
Duzib205G0330 Durio zibethinus HOM05D001099 ORTHO05D000958 4.6e-14 81.6 124 43.5
FAN04G1733 Fragaria x ananassa HOM05D001099 ORTHO05D000958 4.6e-14 81.6 136 41.2
PGR042G2034 Punica granatum HOM05D001099 ORTHO05D000958 6.0e-14 81.3 125 42.4
Gohir.D12G201000 Gossypium hirsutum HOM05D001099 ORTHO05D000958 7.9e-14 80.9 123 43.9
CDE05G1533 Ceratophyllum demersum HOM05D001099 ORTHO05D000958 1.0e-13 80.5 106 47.2
Gohir.A12G198400 Gossypium hirsutum HOM05D001099 ORTHO05D000958 1.0e-13 80.5 123 43.9
Gorai.008G216100 Gossypium raimondii HOM05D001099 ORTHO05D000958 1.0e-13 80.5 123 44.7
GSVIVG01001315001 Vitis vinifera HOM05D001099 ORTHO05D000958 1.0e-13 80.5 123 45.5
Lsat_1_v5_gn_6_91340 Lactuca sativa HOM05D001099 ORTHO05D000958 1.3e-13 80.1 122 41.0
AL7G27950 Arabidopsis lyrata HOM05D001099 ORTHO05D000958 2.3e-13 79.3 129 44.2
COL.COLO4_14123 Corchorus olitorius HOM05D001099 ORTHO05D000958 2.3e-13 79.3 123 43.1
Aa31LG7G10380 Aethionema arabicum HOM05D001099 ORTHO05D000958 5.1e-13 78.2 126 43.7
THA.LOC104808280 Tarenaya hassleriana HOM05D001099 ORTHO05D000958 5.1e-13 78.2 127 42.5
Medtr0004s0510 Medicago truncatula HOM05D001099 ORTHO05D000958 6.6e-13 77.8 126 42.9
TWI23G0452 Tripterygium wilfordii HOM05D001099 ORTHO05D000958 6.6e-13 77.8 122 45.9
AUR62039962 Chenopodium quinoa HOM05D001099 ORTHO05D000958 1.5e-12 76.6 114 40.4
Aqoxy5G03898 Aquilegia oxysepala HOM05D001099 ORTHO05D000958 1.9e-12 76.3 124 45.2
Sp7g23220 Schrenkiella parvula HOM05D001099 ORTHO05D000958 2.5e-12 75.9 127 41.7
Rhsim07G0020900 Rhododendron simsii HOM05D001099 ORTHO05D000958 3.3e-12 75.5 147 38.1
Sabra01G0133100 Salix brachista HOM05D001099 ORTHO05D000958 4.3e-12 75.1 129 41.9
Ah.12g056780 Amaranthus hybridus HOM05D001099 ORTHO05D000958 9.6e-12 73.9 124 42.7
AUR62007509 Chenopodium quinoa HOM05D001099 ORTHO05D000958 9.6e-12 73.9 89 43.8
Potri.003G109200 Populus trichocarpa HOM05D001099 ORTHO05D000958 1.3e-11 73.6 128 43.0
AT4G25200 Arabidopsis thaliana HOM05D001099 ORTHO05D000958 1.6e-11 73.2 125 40.0
Lalb_Chr01g0000691 Lupinus albus HOM05D001099 ORTHO05D000958 2.1e-11 72.8 123 43.1
Sabra03G0075700 Salix brachista HOM05D001099 ORTHO05D000958 2.8e-11 72.4 123 43.9
Hma1.2p1_0432F.1_g151730 Hydrangea macrophylla HOM05D001099 ORTHO05D000958 3.6e-11 72.0 122 41.0
MSTRG.129 Avicennia marina HOM05D001099 ORTHO05D000958 4.8e-11 71.6 123 43.1
TWI39G1145 Tripterygium wilfordii HOM05D001099 ORTHO05D000958 8.1e-11 70.9 122 41.8
Carub.0008s1146 Capsella rubella HOM05D001099 ORTHO05D000958 1.1e-10 70.5 125 43.2
CDE05G1243 Ceratophyllum demersum HOM05D001099 ORTHO05D000958 1.1e-10 70.5 85 49.4
AL8G25730 Arabidopsis lyrata HOM05D001099 ORTHO05D000958 2.4e-10 69.3 124 39.5
Thhalv10014661m.g Eutrema salsugineum HOM05D001099 ORTHO05D000958 2.4e-10 69.3 127 44.1
Ciclev10023715m.g Citrus clementina HOM05D001099 ORTHO05D000958 3.1e-10 68.9 118 39.8
GSVIVG01001316001 Vitis vinifera HOM05D001099 ORTHO05D000958 5.3e-10 68.2 122 40.2
Medtr0361s0010 Medicago truncatula HOM05D001099 ORTHO05D000958 6.9e-10 67.8 72 55.6
Gohir.A08G170900 Gossypium hirsutum HOM05D001099 ORTHO05D000958 1.2e-09 67.0 91 46.2
Migut.F01183 Erythranthe guttata HOM05D001099 ORTHO05D000958 1.5e-09 66.6 122 41.0
Lj3g0025824 Lotus japonicus HOM05D001099 ORTHO05D000958 1.5e-09 66.6 106 45.3
Hma1.2p1_1132F.1_g260310 Hydrangea macrophylla HOM05D001099 ORTHO05D000958 2.0e-09 66.2 124 38.7
CARHR264170 Cardamine hirsuta HOM05D001099 ORTHO05D000958 3.4e-09 65.5 126 40.5
TPR.G20264 Trifolium pratense HOM05D001099 ORTHO05D000958 4.5e-09 65.1 47 63.8
Oeu035950.1 Olea europaea HOM05D001099 ORTHO05D000958 7.6e-09 64.3 122 43.4
Atru.chr1.727 Acer truncatum HOM05D001099 ORTHO05D000958 9.9e-09 63.9 125 36.0
AT5G51440 Arabidopsis thaliana HOM05D001099 ORTHO05D000958 9.9e-09 63.9 124 37.9
SHI13915 Sapria himalayana HOM05D001099 ORTHO05D000958 1.3e-08 63.5 125 41.6
Psat4g136720 Pisum sativum HOM05D001099 ORTHO05D000958 1.7e-08 63.2 121 40.5
Hma1.2p1_1640F.1_g295060 Hydrangea macrophylla HOM05D001099 ORTHO05D000958 2.9e-08 62.4 125 39.2
MSTRG.8412 Avicennia marina HOM05D001099 ORTHO05D000958 4.9e-08 61.6 123 39.8
Sp6g13600 Schrenkiella parvula HOM05D001099 ORTHO05D000958 1.1e-07 60.5 126 35.7
A03p16190 Brassica napus HOM05D001099 ORTHO05D000958 1.4e-07 60.1 127 41.7
BraA03t10910Z Brassica rapa HOM05D001099 ORTHO05D000958 1.4e-07 60.1 127 41.7
CDE06G2649 Ceratophyllum demersum HOM05D001099 ORTHO05D000958 1.4e-07 60.1 82 45.1
TAR375G0450 Trochodendron aralioides HOM05D001099 ORTHO05D000958 1.4e-07 60.1 48 60.4
HPP92_005991 Vanilla planifolia HOM05D001099 ORTHO05D000958 2.4e-07 59.3 97 42.3
MD07G1253800 Malus domestica HOM05D001099 ORTHO05D000958 7.1e-07 57.8 130 36.2
unitig_736.g22948 Utricularia gibba HOM05D001099 ORTHO05D000958 6.0e-06 54.7 122 40.2
vmacro13336 Vaccinium macrocarpon HOM05D001099 ORTHO05D000958 6.0e-06 54.7 50 52.0


User provided reference genes

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