Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu019949.1 Olea europaea HOM05D008090 ORTHO05D010156 2.5e-58 228.4 105 100.0
Sopen02g019980 Solanum pennellii HOM05D008090 ORTHO05D010156 8.5e-30 133.7 107 63.6
MSTRG.7470 Avicennia marina HOM05D008090 ORTHO05D010156 1.1e-29 133.3 105 61.9
Solyc02g070900.1 Solanum lycopersicum HOM05D008090 ORTHO05D010156 1.2e-28 129.8 107 61.7
Nitab4.5_0029367g0010 Nicotiana tabacum HOM05D008090 ORTHO05D010156 2.1e-28 129.0 108 59.3
CAN.G257.11 Capsicum annuum HOM05D008090 ORTHO05D010156 8.0e-28 127.1 107 57.9
FvH4_3g06110 Fragaria vesca HOM05D000133 ORTHO05D000259 4.0e-27 124.8 120 55.8
FAN11G2783 Fragaria x ananassa HOM05D000133 ORTHO05D010156 4.0e-27 124.8 120 55.8
FAN16G3306 Fragaria x ananassa HOM05D008090 ORTHO05D010156 4.0e-27 124.8 120 55.8
PGSC0003DMG400008320 Solanum tuberosum HOM05D008090 ORTHO05D010156 4.0e-27 124.8 107 58.9
FAN25G1154 Fragaria x ananassa HOM05D008090 ORTHO05D010156 5.2e-27 124.4 120 55.8
Cc09_g09530 Coffea canephora HOM05D008090 ORTHO05D010156 1.1e-26 123.2 110 60.9
Migut.M00932 Erythranthe guttata HOM05D008090 ORTHO05D010156 4.4e-26 121.3 107 58.9
RcHm_v2.0_Chr5g0013271 Rosa chinensis HOM05D008090 ORTHO05D010156 7.5e-26 120.6 120 55.0
Prupe.4G076400 Prunus persica HOM05D008090 ORTHO05D010156 1.3e-25 119.8 118 56.8
RcHm_v2.0_Chr5g0013301 Rosa chinensis HOM05D008090 ORTHO05D010156 2.2e-25 119.0 120 54.2
QL05p059335 Quercus lobata HOM05D008090 ORTHO05D010156 7.0e-24 114.0 121 49.6
SGA_v2.0_scaffold1G00152 Striga asiatica HOM05D008090 ORTHO05D010156 2.7e-23 112.1 107 57.0
Rhsim13G0192500 Rhododendron simsii HOM05D008090 ORTHO05D010156 5.9e-23 110.9 116 51.7
Lalb_Chr03g0037351 Lupinus albus HOM05D008090 ORTHO05D010156 2.2e-22 109.0 114 53.5
MBI07_g21779_MAGBIO Magnolia biondii HOM05D008090 ORTHO05D010156 2.2e-22 109.0 104 53.8
Haze_05542 Corylus avellana HOM05D008090 ORTHO05D010156 5.0e-22 107.8 117 51.3
Cfa000975 Carpinus fangiana HOM05D008090 ORTHO05D010156 6.5e-22 107.5 117 50.4
AUR62035141 Chenopodium quinoa HOM05D008090 ORTHO05D010156 6.5e-22 107.5 101 55.4
Lj1P1184T52 Lonicera japonica HOM05D008090 ORTHO05D010156 1.1e-21 106.7 110 53.6
Dinv30710 Davidia involucrata HOM05D000133 ORTHO05D010156 1.5e-21 106.3 114 55.3
Lj2P974T32 Lonicera japonica HOM05D008090 ORTHO05D010156 4.2e-21 104.8 110 53.6
Peaxi162Scf00347g00042 Petunia axillaris HOM05D008090 ORTHO05D010156 5.5e-21 104.4 111 54.1
MD05G1289100 Malus domestica HOM05D008090 ORTHO05D010156 9.4e-21 103.6 115 49.6
arahy.Tifrunner.gnm1.ann1.548L12 Arachis hypogaea HOM05D008090 ORTHO05D010156 1.2e-20 103.2 110 51.8
arahy.Tifrunner.gnm1.ann1.S5KLBV Arachis hypogaea HOM05D008090 ORTHO05D010156 1.2e-20 103.2 110 52.7
Ca_18277_v3 Cicer arietinum L. HOM05D000133 ORTHO05D000259 1.2e-20 103.2 121 49.6
Manes.17G067400 Manihot esculenta HOM05D008090 ORTHO05D010156 1.2e-20 103.2 115 49.6
DCAR_003940 Daucus carota HOM05D000013 ORTHO05D010156 2.1e-20 102.4 103 52.4
Ah.00g001040 Amaranthus hybridus HOM05D008090 ORTHO05D010156 6.1e-20 100.9 79 60.8
Glyma.05G128100 Glycine max HOM05D008090 ORTHO05D010156 5.2e-19 97.8 108 50.9
EL10Ac4g09546 Beta vulgaris HOM05D008090 ORTHO05D010156 1.5e-18 96.3 105 50.5
Lsat_1_v5_gn_4_30220 Lactuca sativa HOM05D008090 ORTHO05D010156 2.0e-18 95.9 82 56.1
TAR629G2487 Trochodendron aralioides HOM05D008090 ORTHO05D010156 2.0e-18 95.9 115 47.8
TAR629G3101 Trochodendron aralioides HOM05D008090 ORTHO05D010156 2.0e-18 95.9 115 47.8
Aqoxy4G00119 Aquilegia oxysepala HOM05D008090 ORTHO05D010156 2.6e-18 95.5 115 46.1
Psat7g091840 Pisum sativum HOM05D008090 ORTHO05D010156 2.6e-18 95.5 118 49.2
Hund17789 Selenicereus undatus HOM05D008090 ORTHO05D010156 3.4e-18 95.1 110 49.1
Lj4g0014733 Lotus japonicus HOM05D008090 ORTHO05D010156 4.4e-18 94.7 120 46.7
Nn3g17305 Nelumbo nucifera HOM05D008090 ORTHO05D010156 4.4e-18 94.7 79 60.8
Sed0014565 Sechium edule HOM05D008090 ORTHO05D010156 4.4e-18 94.7 80 61.2
ECA234G1353 Erigeron canadensis HOM05D008090 ORTHO05D010156 7.5e-18 94.0 105 49.5
Gohir.D06G141600 Gossypium hirsutum HOM05D008090 ORTHO05D010156 9.8e-18 93.6 113 51.3
Gorai.010G165200 Gossypium raimondii HOM05D008090 ORTHO05D010156 9.8e-18 93.6 113 51.3
Potri.004G065500 Populus trichocarpa HOM05D008090 ORTHO05D010156 1.3e-17 93.2 123 46.3
Gohir.A06G136400 Gossypium hirsutum HOM05D008090 ORTHO05D010156 3.7e-17 91.7 113 51.3
HanXRQChr17g0565011 Helianthus annuus HOM05D008090 ORTHO05D010156 6.3e-17 90.9 104 50.0
CANSAT35G0881 Cannabis sativa HOM05D008090 ORTHO05D010156 8.3e-17 90.5 122 47.5
Medtr4g094608 Medicago truncatula HOM05D008090 ORTHO05D010156 1.1e-16 90.1 114 47.4
Sabra04G0043800 Salix brachista HOM05D008090 ORTHO05D010156 1.1e-16 90.1 120 45.8
CsaV3_1G032520 Cucumis sativus L. HOM05D008090 ORTHO05D010156 2.4e-16 89.0 110 46.4
ClCG03G006940 Citrullus lanatus HOM05D008090 ORTHO05D010156 5.4e-16 87.8 83 51.8
Phvul.002G196300 Phaseolus vulgaris HOM05D008090 ORTHO05D010156 5.4e-16 87.8 112 46.4
TWI09G1028 Tripterygium wilfordii HOM05D008090 ORTHO05D010156 5.4e-16 87.8 90 54.4
Sc17g0005080 Simmondsia chinensis HOM05D008090 ORTHO05D010156 7.0e-16 87.4 81 51.9
TPR.G4884 Trifolium pratense HOM05D000133 ORTHO05D000259 7.0e-16 87.4 81 54.3
MELO3C002726.2 Cucumis melo HOM05D008090 ORTHO05D010156 9.1e-16 87.0 85 51.8
Thecc.06G154700 Theobroma cacao HOM05D008090 ORTHO05D010156 2.7e-15 85.5 113 47.8
PGSC0003DMG400008321 Solanum tuberosum HOM05D008090 ORTHO05D010156 3.8e-14 81.6 78 52.6
COL.COLO4_06066 Corchorus olitorius HOM05D008090 ORTHO05D010156 1.9e-13 79.3 81 51.9
VMungo0251G0641 Vigna mungo HOM05D008090 ORTHO05D010156 5.5e-13 77.8 103 44.7
SEGI_25907 Sequoiadendron giganteum HOM05D008090 ORTHO05D010156 2.1e-12 75.9 94 43.6
Os01g0243600 Oryza sativa ssp. japonica HOM05D008090 ORTHO05D010156 1.2e-10 70.1 84 42.9
Zm00001eb079770 Zea mays HOM05D008090 ORTHO05D010156 1.7e-09 66.2 78 39.7
Nitab4.5_0006300g0040 Nicotiana tabacum HOM05D008090 ORTHO05D010156 9.2e-08 60.5 48 58.3
Ciclev10027155m.g Citrus clementina HOM05D008090 ORTHO05D010156 1.0e-06 57.0 80 40.0
MBI19_g47931_MAGBIO Magnolia biondii HOM05D008090 ORTHO05D010156 1.7e-06 56.2 53 49.1


User provided reference genes

Program Settings