Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu019722.1 Olea europaea HOM05D000063 ORTHO05D291234 1.2e-58 229.6 106 100.0
MSTRG.14562 Avicennia marina HOM05D000063 ORTHO05D010617 1.9e-13 79.3 187 31.6
Oeu034982.1 Olea europaea HOM05D000063 ORTHO05D010617 1.6e-12 76.3 173 32.9
Prupe.4G132100 Prunus persica HOM05D000063 ORTHO05D010617 8.1e-12 73.9 173 31.8
Atru.chr1.91 Acer truncatum HOM05D000063 ORTHO05D010617 1.1e-11 73.6 184 31.0
Manes.14G009600 Manihot esculenta HOM05D000063 ORTHO05D010617 1.1e-11 73.6 174 31.6
Potri.005G095100 Populus trichocarpa HOM05D000063 ORTHO05D010617 3.1e-11 72.0 189 31.7
COL.COLO4_19756 Corchorus olitorius HOM05D000063 ORTHO05D010617 3.4e-10 68.6 186 30.6
MBI18_g05693_MAGBIO Magnolia biondii HOM05D000063 ORTHO05D010617 3.4e-10 68.6 194 28.4
Ciclev10004715m.g Citrus clementina HOM05D000063 ORTHO05D010617 4.4e-10 68.2 173 30.6
CiPaw.11G061400 Carya illinoinensis HOM05D000063 ORTHO05D010617 5.8e-10 67.8 186 30.1
Peaxi162Scf00452g00037 Petunia axillaris HOM05D000063 ORTHO05D010617 7.6e-10 67.4 40 70.0
Gohir.D01G084400 Gossypium hirsutum HOM05D000063 ORTHO05D010617 9.9e-10 67.0 48 64.6
Gorai.002G110100 Gossypium raimondii HOM05D000063 ORTHO05D010617 9.9e-10 67.0 48 64.6
Nitab4.5_0000029g0260 Nicotiana tabacum HOM05D000063 ORTHO05D010617 9.9e-10 67.0 33 84.8
ATR0697G024 Amborella trichopoda HOM05D000063 ORTHO05D010617 2.2e-09 65.9 187 28.9
Nitab4.5_0006109g0070 Nicotiana tabacum HOM05D000063 ORTHO05D010617 2.2e-09 65.9 33 81.8
MD05G1229500 Malus domestica HOM05D000063 ORTHO05D010617 2.9e-09 65.5 172 29.7
QL04p087408 Quercus lobata HOM05D000063 ORTHO05D010617 4.9e-09 64.7 31 83.9
TAR629G0078 Trochodendron aralioides HOM05D000063 ORTHO05D010617 4.9e-09 64.7 48 62.5
Thecc.07G182900 Theobroma cacao HOM05D000063 ORTHO05D010617 6.4e-09 64.3 186 30.1
CANSAT80G2188 Cannabis sativa HOM05D000063 ORTHO05D010617 8.4e-09 63.9 47 63.8
Dinv19584 Davidia involucrata HOM05D000063 ORTHO05D010617 8.4e-09 63.9 186 30.1
Duzib268G0094 Durio zibethinus HOM05D000063 ORTHO05D010617 8.4e-09 63.9 187 28.9
Gohir.A01G099900 Gossypium hirsutum HOM05D000063 ORTHO05D010617 8.4e-09 63.9 47 61.7
RcHm_v2.0_Chr5g0024171 Rosa chinensis HOM05D000063 ORTHO05D010617 8.4e-09 63.9 34 79.4
Cpa.g.sc34.30 Carica papaya HOM05D000063 ORTHO05D010617 1.4e-08 63.2 173 28.9
Migut.H01666 Erythranthe guttata HOM05D000063 ORTHO05D010617 1.9e-08 62.8 172 29.1
FvH4_3g14680 Fragaria vesca HOM05D000063 ORTHO05D010617 1.9e-08 62.8 34 76.5
FAN11G2984 Fragaria x ananassa HOM05D000063 ORTHO05D010617 1.9e-08 62.8 34 76.5
FAN16G3605 Fragaria x ananassa HOM05D000063 ORTHO05D010617 1.9e-08 62.8 34 76.5
Lj2C13G4 Lonicera japonica HOM05D000063 ORTHO05D010617 2.4e-08 62.4 33 75.8
Aqoxy1G02722 Aquilegia oxysepala HOM05D000063 ORTHO05D010617 5.4e-08 61.2 32 78.1
Haze_07813 Corylus avellana HOM05D000063 ORTHO05D010617 5.4e-08 61.2 170 30.0
Actinidia35418 Actinidia chinensis HOM05D000063 ORTHO05D010617 1.6e-07 59.7 33 72.7
Eucgr.F04460 Eucalyptus grandis HOM05D000063 ORTHO05D010617 2.1e-07 59.3 32 71.9
TWI38G0251 Tripterygium wilfordii HOM05D000063 ORTHO05D010617 2.1e-07 59.3 33 75.8
Medtr8g442410 Medicago truncatula HOM05D000063 ORTHO05D010617 2.7e-07 58.9 29 82.8
Lj3g0020609 Lotus japonicus HOM05D000063 ORTHO05D010617 3.5e-07 58.5 29 79.3
DCAR_019917 Daucus carota HOM05D000063 ORTHO05D010617 7.8e-07 57.4 31 67.7
TPR.G9400 Trifolium pratense HOM05D000063 ORTHO05D010617 7.8e-07 57.4 29 79.3
PGR031G3240 Punica granatum HOM05D000063 ORTHO05D010617 1.0e-06 57.0 31 77.4
SEGI_18934 Sequoiadendron giganteum HOM05D000063 ORTHO05D010617 1.0e-06 57.0 33 69.7
Solyc03g110950.1 Solanum lycopersicum HOM05D000063 ORTHO05D008721 1.7e-06 56.2 36 58.3
Sopen03g030140 Solanum pennellii HOM05D000063 ORTHO05D008721 1.7e-06 56.2 36 58.3
PGSC0003DMG400015255 Solanum tuberosum HOM05D000063 ORTHO05D008721 1.7e-06 56.2 36 58.3
Psat4g169800 Pisum sativum HOM05D000063 ORTHO05D010617 2.3e-06 55.8 29 79.3
Sabra10G0080900 Salix brachista HOM05D000063 ORTHO05D001671 2.3e-06 55.8 39 51.3
Lalb_Chr03g0031861 Lupinus albus HOM05D000063 ORTHO05D010617 3.0e-06 55.5 31 74.2
FAN12G2069 Fragaria x ananassa HOM05D000063 ORTHO05D008721 3.9e-06 55.1 43 55.8
TAR622G0872 Trochodendron aralioides HOM05D000063 ORTHO05D008721 5.1e-06 54.7 36 58.3
Ca_27786_v3 Cicer arietinum L. HOM05D000063 ORTHO05D010617 6.6e-06 54.3 29 75.9
PSO013G0068 Papaver somniferum HOM05D000063 ORTHO05D008721 6.6e-06 54.3 36 61.1
PSO832G4231 Papaver somniferum HOM05D000063 ORTHO05D008721 6.6e-06 54.3 36 61.1
CAN.G352.55 Capsicum annuum HOM05D000063 ORTHO05D008721 8.6e-06 53.9 36 55.6
FvH4_4g24820 Fragaria vesca HOM05D000063 ORTHO05D008721 8.6e-06 53.9 43 55.8


User provided reference genes

Program Settings