Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu019707.1 Olea europaea HOM05D003316 ORTHO05D003690 2.6e-29 131.3 65 100.0
Oeu051683.1 Olea europaea HOM05D003316 ORTHO05D003690 6.2e-23 110.2 63 84.1
SGA_v2.0_scaffold239G44036 Striga asiatica HOM05D003316 ORTHO05D003690 3.8e-20 100.9 63 76.2
MSTRG.14558 Avicennia marina HOM05D003316 ORTHO05D003690 1.4e-19 99.0 63 73.0
MSTRG.13075 Avicennia marina HOM05D003316 ORTHO05D003690 9.3e-19 96.3 64 73.4
Migut.H01676 Erythranthe guttata HOM05D003316 ORTHO05D003690 1.3e-17 92.4 64 73.4
Migut.M01536 Erythranthe guttata HOM05D003316 ORTHO05D003690 1.3e-17 92.4 63 69.8
Cc05_g16270 Coffea canephora HOM05D003316 ORTHO05D003690 6.7e-17 90.1 63 73.0
MSTRG.7073 Avicennia marina HOM05D003316 ORTHO05D003690 1.9e-16 88.6 63 69.8
Dinv19599 Davidia involucrata HOM05D003316 ORTHO05D003690 2.5e-16 88.2 67 65.7
unitig_37.g12202 Utricularia gibba HOM05D003316 ORTHO05D003690 5.7e-16 87.0 63 68.3
SalBow8G1536 Salvia bowleyana HOM05D003316 ORTHO05D003690 7.4e-16 86.7 63 68.3
Actinidia12775 Actinidia chinensis HOM05D003316 ORTHO05D003690 1.6e-15 85.5 65 64.6
Rhsim06G0241400 Rhododendron simsii HOM05D003316 ORTHO05D003690 1.6e-15 85.5 66 60.6
MSTRG.16103 Avicennia marina HOM05D003316 ORTHO05D003690 2.1e-15 85.1 63 68.3
Lj1A910T5 Lonicera japonica HOM05D003316 ORTHO05D003690 2.8e-15 84.7 65 67.7
Dinv42487 Davidia involucrata HOM05D003316 ORTHO05D003690 6.3e-15 83.6 70 60.0
Nitab4.5_0003929g0010 Nicotiana tabacum HOM05D003316 ORTHO05D003690 1.1e-14 82.8 70 60.0
CSS0025565 Camellia sinensis var. sinensis HOM05D003316 ORTHO05D003690 1.4e-14 82.4 68 64.7
Actinidia07371 Actinidia chinensis HOM05D003316 ORTHO05D003690 1.8e-14 82.0 65 61.5
Hma1.2p1_0151F.1_g067420 Hydrangea macrophylla HOM05D003316 ORTHO05D003690 1.8e-14 82.0 67 64.2
Nitab4.5_0008429g0010 Nicotiana tabacum HOM05D003316 ORTHO05D003690 2.4e-14 81.6 73 61.6
Sopen07g034730 Solanum pennellii HOM05D003316 ORTHO05D003690 3.1e-14 81.3 63 65.1
CSS0004609 Camellia sinensis var. sinensis HOM05D003316 ORTHO05D003690 4.1e-14 80.9 67 58.2
CSS0033846 Camellia sinensis var. sinensis HOM05D003316 ORTHO05D003690 4.1e-14 80.9 67 58.2
MBI02_g21020_MAGBIO Magnolia biondii HOM05D003316 ORTHO05D003690 6.9e-14 80.1 67 58.2
Actinidia35424 Actinidia chinensis HOM05D003316 ORTHO05D003690 1.2e-13 79.3 72 59.7
Nitab4.5_0000747g0040 Nicotiana tabacum HOM05D003316 ORTHO05D003690 2.0e-13 78.6 70 58.6
Peaxi162Scf00452g00411 Petunia axillaris HOM05D003316 ORTHO05D003690 2.6e-13 78.2 68 63.2
Solyc07g066570.4 Solanum lycopersicum HOM05D003316 ORTHO05D003690 5.9e-13 77.0 63 61.9
unitig_32.g11082 Utricularia gibba HOM05D003316 ORTHO05D003690 7.6e-13 76.6 65 61.5
PGSC0003DMG400022120 Solanum tuberosum HOM05D003316 ORTHO05D003690 1.0e-12 76.3 63 61.9
TPR.G33853 Trifolium pratense HOM05D003316 ORTHO05D003690 1.0e-12 76.3 72 58.3
vmacro11707 Vaccinium macrocarpon HOM05D003316 ORTHO05D003690 1.0e-12 76.3 65 56.9
TAR627G0616 Trochodendron aralioides HOM05D003316 ORTHO05D003690 1.3e-12 75.9 67 59.7
unitig_578.g16328 Utricularia gibba HOM05D003316 ORTHO05D003690 2.2e-12 75.1 54 70.4
unitig_8.g4755 Utricularia gibba HOM05D003316 ORTHO05D003690 3.8e-12 74.3 53 71.7
Actinidia37126 Actinidia chinensis HOM05D003316 ORTHO05D003690 5.0e-12 73.9 73 54.8
Cpa.g.c41747 Carica papaya HOM05D003316 ORTHO05D003690 5.0e-12 73.9 74 58.1
Glyma.15G259100 Glycine max HOM05D003316 ORTHO05D003690 5.0e-12 73.9 70 57.1
Medtr2g066700 Medicago truncatula HOM05D003316 ORTHO05D003690 8.4e-12 73.2 71 53.5
CAN.G492.73 Capsicum annuum HOM05D003316 ORTHO05D003690 1.9e-11 72.0 53 75.5
BcaNung04897 Brassica carinata HOM05D003316 ORTHO05D003690 2.5e-11 71.6 65 58.5
CiPaw.11G063000 Carya illinoinensis HOM05D003316 ORTHO05D003690 2.5e-11 71.6 78 50.0
Sed0001262 Sechium edule HOM05D003316 ORTHO05D003690 2.5e-11 71.6 68 61.8
Manes.06G175000 Manihot esculenta HOM05D003316 ORTHO05D003690 3.2e-11 71.2 69 56.5
unitig_26.g10065 Utricularia gibba HOM05D003316 ORTHO05D003690 3.2e-11 71.2 65 56.9
BcaC08g47478 Brassica carinata HOM05D003316 ORTHO05D003690 4.2e-11 70.9 70 55.7
C06p53030 Brassica napus HOM05D003316 ORTHO05D003690 4.2e-11 70.9 70 55.7
MELO3C012614.2 Cucumis melo HOM05D003316 ORTHO05D003690 4.2e-11 70.9 68 61.8
CsaV3_7G022850 Cucumis sativus L. HOM05D003316 ORTHO05D003690 4.2e-11 70.9 68 61.8
Potri.007G067300 Populus trichocarpa HOM05D003316 ORTHO05D003690 4.2e-11 70.9 68 58.8
Nn7g37833 Nelumbo nucifera HOM05D003316 ORTHO05D003690 5.5e-11 70.5 68 54.4
Ca_03607_v3 Cicer arietinum L. HOM05D003316 ORTHO05D003690 7.2e-11 70.1 72 55.6
Lalb_Chr01g0007091 Lupinus albus HOM05D003316 ORTHO05D003690 7.2e-11 70.1 73 52.1
Prupe.4G136500 Prunus persica HOM05D003316 ORTHO05D003690 7.2e-11 70.1 73 54.8
arahy.Tifrunner.gnm1.ann1.JV1AYU Arachis hypogaea HOM05D003316 ORTHO05D003690 9.3e-11 69.7 63 58.7
arahy.Tifrunner.gnm1.ann1.Q78MS7 Arachis hypogaea HOM05D003316 ORTHO05D003690 9.3e-11 69.7 63 58.7
BolC6t40320H Brassica oleracea HOM05D003316 ORTHO05D003690 9.3e-11 69.7 70 54.3
FAN25G0335 Fragaria x ananassa HOM05D003316 ORTHO05D003690 9.3e-11 69.7 76 52.6
GSVIVG01038001001 Vitis vinifera HOM05D003316 ORTHO05D003690 9.3e-11 69.7 63 54.0
Phvul.005G051100 Phaseolus vulgaris HOM05D003316 ORTHO05D003690 1.2e-10 69.3 71 56.3
Haze_07827 Corylus avellana HOM05D003316 ORTHO05D003690 1.6e-10 68.9 75 50.7
FvH4_3g15360 Fragaria vesca HOM05D003316 ORTHO05D003690 1.6e-10 68.9 76 52.6
FAN11G0988 Fragaria x ananassa HOM05D003316 ORTHO05D003690 1.6e-10 68.9 76 52.6
MD05G1223700 Malus domestica HOM05D003316 ORTHO05D003690 1.6e-10 68.9 75 52.0
Manes.14G011100 Manihot esculenta HOM05D003316 ORTHO05D003690 1.6e-10 68.9 71 54.9
GSVIVG01036804001 Vitis vinifera HOM05D003316 ORTHO05D003690 1.6e-10 68.9 70 54.3
Cfa022970 Carpinus fangiana HOM05D003316 ORTHO05D003690 2.1e-10 68.6 76 50.0
FAN16G3516 Fragaria x ananassa HOM05D003316 ORTHO05D003690 2.1e-10 68.6 76 52.6
Potri.005G096800 Populus trichocarpa HOM05D003316 ORTHO05D003690 2.1e-10 68.6 73 52.1
VMungo1080G0561 Vigna mungo HOM05D003316 ORTHO05D003690 2.7e-10 68.2 70 57.1
EL10Ac8g18492 Beta vulgaris HOM05D003316 ORTHO05D003690 3.5e-10 67.8 34 88.2
Eucgr.F04447 Eucalyptus grandis HOM05D003316 ORTHO05D003690 3.5e-10 67.8 71 49.3
MD10G1205200 Malus domestica HOM05D003316 ORTHO05D003690 3.5e-10 67.8 75 50.7
Psat1g005840 Pisum sativum HOM05D003316 ORTHO05D003690 6.1e-10 67.0 72 58.3
AUR62016808 Chenopodium quinoa HOM05D003316 ORTHO05D003690 7.9e-10 66.6 34 85.3
TWI38G1355 Tripterygium wilfordii HOM05D003316 ORTHO05D003690 7.9e-10 66.6 68 52.9
BcaB02g08670 Brassica carinata HOM05D003316 ORTHO05D003690 1.0e-09 66.2 68 54.4
FAN21G3518 Fragaria x ananassa HOM05D003316 ORTHO05D003690 1.0e-09 66.2 76 51.3
Lj3g0011134 Lotus japonicus HOM05D003316 ORTHO05D003690 1.0e-09 66.2 71 49.3
RcHm_v2.0_Chr5g0025801 Rosa chinensis HOM05D003316 ORTHO05D003690 1.0e-09 66.2 76 52.6
Hund12435 Selenicereus undatus HOM05D003316 ORTHO05D003690 1.0e-09 66.2 34 85.3
THA.LOC104813611 Tarenaya hassleriana HOM05D003316 ORTHO05D003690 1.0e-09 66.2 68 52.9
ClCG09G022660 Citrullus lanatus HOM05D003316 ORTHO05D003690 1.3e-09 65.9 64 57.8
QL04p080199 Quercus lobata HOM05D003316 ORTHO05D003690 1.3e-09 65.9 80 47.5
Lalb_Chr03g0031631 Lupinus albus HOM05D003316 ORTHO05D003690 2.3e-09 65.1 73 47.9
Lalb_Chr20g0108611 Lupinus albus HOM05D003316 ORTHO05D003690 3.9e-09 64.3 79 51.9
Duzib187G1768 Durio zibethinus HOM05D003316 ORTHO05D003690 8.7e-09 63.2 74 56.8
Aa31LG4G1840 Aethionema arabicum HOM05D003316 ORTHO05D003690 1.1e-08 62.8 72 54.2
CDE06G2584 Ceratophyllum demersum HOM05D003316 ORTHO05D003690 1.1e-08 62.8 70 50.0
Sp5g34220 Schrenkiella parvula HOM05D003316 ORTHO05D003690 1.1e-08 62.8 70 54.3
TWI38G0778 Tripterygium wilfordii HOM05D003316 ORTHO05D003690 1.1e-08 62.8 68 52.9
Atru.chr1.123 Acer truncatum HOM05D003316 ORTHO05D003690 1.5e-08 62.4 75 46.7
PGR031G2416 Punica granatum HOM05D003316 ORTHO05D003690 1.9e-08 62.0 66 57.6
Sed0022394 Sechium edule HOM05D003316 ORTHO05D003690 1.9e-08 62.0 65 52.3
DCAR_013730 Daucus carota HOM05D003316 ORTHO05D003690 2.5e-08 61.6 66 51.5
CANSAT80G0009 Cannabis sativa HOM05D003316 ORTHO05D003690 3.3e-08 61.2 81 45.7
ClCG02G018610 Citrullus lanatus HOM05D003316 ORTHO05D003690 3.3e-08 61.2 73 52.1
THA.LOC104808128 Tarenaya hassleriana HOM05D003316 ORTHO05D003690 3.3e-08 61.2 71 49.3
CDE02G3419 Ceratophyllum demersum HOM05D003316 ORTHO05D003690 4.3e-08 60.8 67 47.8
DCAR_016833 Daucus carota HOM05D003316 ORTHO05D003690 5.7e-08 60.5 67 50.7
BcaC05g25564 Brassica carinata HOM05D003316 ORTHO05D003690 9.7e-08 59.7 75 48.0
QL04p080175 Quercus lobata HOM05D003316 ORTHO05D003690 9.7e-08 59.7 78 44.9
ATR0763G052 Amborella trichopoda HOM05D003316 ORTHO05D003690 1.3e-07 59.3 63 52.4
Sc09g0007620 Simmondsia chinensis HOM05D003316 ORTHO05D003690 1.3e-07 59.3 35 80.0
Sed0025744 Sechium edule HOM05D003316 ORTHO05D003690 1.6e-07 58.9 70 51.4
BcaB02g06634 Brassica carinata HOM05D003316 ORTHO05D003690 2.2e-07 58.5 75 48.0
A06p12480 Brassica napus HOM05D003316 ORTHO05D003690 2.2e-07 58.5 74 47.3
C05p14730 Brassica napus HOM05D003316 ORTHO05D003690 2.2e-07 58.5 74 47.3
BolC5t30193H Brassica oleracea HOM05D003316 ORTHO05D003690 2.2e-07 58.5 74 47.3
BraA06t24411Z Brassica rapa HOM05D003316 ORTHO05D003690 2.2e-07 58.5 74 47.3
CDE05G3501 Ceratophyllum demersum HOM05D003316 ORTHO05D003690 2.2e-07 58.5 65 52.3
HanXRQChr11g0335691 Helianthus annuus HOM05D003316 ORTHO05D003690 2.2e-07 58.5 69 55.1
A07p44280 Brassica napus HOM05D003316 ORTHO05D003690 2.8e-07 58.2 68 48.5
BraA07t31937Z Brassica rapa HOM05D003316 ORTHO05D003690 2.8e-07 58.2 68 48.5
BcaC05g25563 Brassica carinata HOM05D003316 ORTHO05D003690 3.7e-07 57.8 74 47.3
Gohir.A13G122600 Gossypium hirsutum HOM05D003316 ORTHO05D003690 3.7e-07 57.8 77 51.9
Gohir.D13G126700 Gossypium hirsutum HOM05D003316 ORTHO05D003690 3.7e-07 57.8 77 51.9
Gorai.013G141800 Gossypium raimondii HOM05D003316 ORTHO05D003690 3.7e-07 57.8 77 51.9
BolC8t51988H Brassica oleracea HOM05D003316 ORTHO05D003690 4.8e-07 57.4 71 46.5
Ciclev10005652m.g Citrus clementina HOM05D003316 ORTHO05D003690 4.8e-07 57.4 73 42.5
Lsat_1_v5_gn_7_110360 Lactuca sativa HOM05D003316 ORTHO05D003690 4.8e-07 57.4 42 73.8
Lj3g0011998 Lotus japonicus HOM05D003316 ORTHO05D003690 4.8e-07 57.4 39 69.2
Lalb_Chr01g0015851 Lupinus albus HOM05D003316 ORTHO05D003690 4.8e-07 57.4 78 50.0
AL2G39640 Arabidopsis lyrata HOM05D003316 ORTHO05D003690 6.3e-07 57.0 70 51.4
CsaV3_6G013590 Cucumis sativus L. HOM05D003316 ORTHO05D003690 6.3e-07 57.0 72 45.8
C08p44470 Brassica napus HOM05D003316 ORTHO05D003690 8.2e-07 56.6 71 46.5
Carub.0001s1625 Capsella rubella HOM05D003316 ORTHO05D003690 8.2e-07 56.6 74 43.2
Duzib213G0545 Durio zibethinus HOM05D003316 ORTHO05D003690 8.2e-07 56.6 75 53.3
unitig_749.g13695 Utricularia gibba HOM05D003316 ORTHO05D003690 1.1e-06 56.2 41 63.4
MELO3C019643.2 Cucumis melo HOM05D003316 ORTHO05D003690 1.4e-06 55.8 72 47.2
Gohir.A01G096900 Gossypium hirsutum HOM05D003316 ORTHO05D003690 1.4e-06 55.8 81 45.7
Gorai.002G106100 Gossypium raimondii HOM05D003316 ORTHO05D003690 1.4e-06 55.8 81 45.7
Aa31LG7G1040 Aethionema arabicum HOM05D003316 ORTHO05D003690 2.4e-06 55.1 72 45.8
Sed0011738 Sechium edule HOM05D003316 ORTHO05D003690 2.4e-06 55.1 73 46.6
ECA236G2699 Erigeron canadensis HOM05D003316 ORTHO05D003690 3.1e-06 54.7 45 64.4
CDE02G2536 Ceratophyllum demersum HOM05D003316 ORTHO05D003690 4.1e-06 54.3 64 50.0
Thhalv10008548m.g Eutrema salsugineum HOM05D003316 ORTHO05D003690 5.3e-06 53.9 71 46.5
CARHR016970 Cardamine hirsuta HOM05D003316 ORTHO05D003690 6.9e-06 53.5 75 46.7
Thecc.07G169200 Theobroma cacao HOM05D003316 ORTHO05D003690 9.0e-06 53.1 78 46.2


User provided reference genes

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