Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu019614.1 Olea europaea HOM05D006137 ORTHO05D007697 4.7e-194 681.0 348 100.0
Oeu019613.1 Olea europaea HOM05D006137 ORTHO05D007697 7.3e-187 657.1 360 94.7
Oeu017078.1 Olea europaea HOM05D006137 ORTHO05D007697 9.7e-131 470.7 307 81.4
Cc08_g03270 Coffea canephora HOM05D006137 ORTHO05D007697 9.8e-115 417.5 324 66.7
Dinv25255 Davidia involucrata HOM05D006137 ORTHO05D007697 2.5e-110 402.9 323 64.7
Nitab4.5_0002190g0020 Nicotiana tabacum HOM05D006137 ORTHO05D007697 4.3e-110 402.1 323 63.2
Peaxi162Scf00170g00615 Petunia axillaris HOM05D006137 ORTHO05D007697 2.8e-109 399.4 307 64.8
Solyc08g076410.4 Solanum lycopersicum HOM05D006137 ORTHO05D007697 1.4e-108 397.1 308 64.9
Sopen08g024990 Solanum pennellii HOM05D006137 ORTHO05D007697 1.8e-108 396.7 319 63.6
MSTRG.24846 Avicennia marina HOM05D006137 ORTHO05D007697 3.0e-108 396.0 339 62.8
PGSC0003DMG400014792 Solanum tuberosum HOM05D006137 ORTHO05D007697 5.2e-108 395.2 319 63.9
Migut.A01172 Erythranthe guttata HOM05D006137 ORTHO05D007697 2.6e-107 392.9 358 60.1
CAN.G726.20 Capsicum annuum HOM05D006137 ORTHO05D007697 3.4e-107 392.5 304 64.1
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 2.2e-106 389.8 320 63.1
CSS0021967 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 2.9e-106 389.4 306 63.7
Nitab4.5_0003416g0030 Nicotiana tabacum HOM05D006137 ORTHO05D007697 3.6e-101 372.5 303 62.7
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla HOM05D006137 ORTHO05D007697 3.1e-100 369.4 311 62.4
Oeu002327.1 Olea europaea HOM05D006137 ORTHO05D007697 3.1e-100 369.4 215 86.5
vmacro08163 Vaccinium macrocarpon HOM05D006137 ORTHO05D007697 9.8e-99 364.4 279 65.2
Rhsim11G0021000 Rhododendron simsii HOM05D006137 ORTHO05D007697 3.7e-98 362.5 346 55.8
Gohir.D12G208800 Gossypium hirsutum HOM05D006137 ORTHO05D007697 1.4e-97 360.5 278 64.7
CiPaw.11G098100 Carya illinoinensis HOM05D006137 ORTHO05D007697 7.0e-97 358.2 317 58.7
Gorai.008G224300 Gossypium raimondii HOM05D006137 ORTHO05D007697 7.0e-97 358.2 278 64.7
Thecc.03G309800 Theobroma cacao HOM05D006137 ORTHO05D007697 2.0e-96 356.7 329 55.9
TAR629G2895 Trochodendron aralioides HOM05D006137 ORTHO05D007697 2.0e-96 356.7 322 58.1
GSVIVG01013108001 Vitis vinifera HOM05D006137 ORTHO05D007697 2.0e-96 356.7 336 55.4
CSS0050317 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 2.7e-96 356.3 287 62.7
unitig_748.g7545 Utricularia gibba HOM05D006137 ORTHO05D007697 3.5e-96 355.9 326 59.8
Gohir.A12G206400 Gossypium hirsutum HOM05D006137 ORTHO05D007697 7.8e-96 354.8 278 64.0
Sc24g0002950 Simmondsia chinensis HOM05D006137 ORTHO05D007697 1.0e-95 354.4 288 61.1
Duzib068G1414 Durio zibethinus HOM05D006137 ORTHO05D007697 3.0e-95 352.8 326 57.1
Thhalv10016768m.g Eutrema salsugineum HOM05D006137 ORTHO05D007697 1.1e-94 350.9 289 60.6
Aqoxy2G03876 Aquilegia oxysepala HOM05D006137 ORTHO05D007697 1.5e-94 350.5 290 60.0
AT2G35500 Arabidopsis thaliana HOM05D006137 ORTHO05D007697 1.9e-94 350.1 327 55.7
FvH4_5g23010 Fragaria vesca HOM05D006137 ORTHO05D007697 2.5e-94 349.7 283 61.5
Nn3g19394 Nelumbo nucifera HOM05D006137 ORTHO05D007697 4.3e-94 349.0 342 54.4
Atru.chr6.1520 Acer truncatum HOM05D006137 ORTHO05D007697 7.3e-94 348.2 327 56.6
ECA233G6209 Erigeron canadensis HOM05D006137 ORTHO05D007697 7.3e-94 348.2 324 55.2
CARHR129650 Cardamine hirsuta HOM05D006137 ORTHO05D007697 9.5e-94 347.8 341 54.3
MD06G1026400 Malus domestica HOM05D006137 ORTHO05D007697 9.5e-94 347.8 286 61.9
BcaB06g28845 Brassica carinata HOM05D006137 ORTHO05D007697 1.2e-93 347.4 322 55.6
AL4G31550 Arabidopsis lyrata HOM05D006137 ORTHO05D007697 2.1e-93 346.7 332 54.5
Sp4g17720 Schrenkiella parvula HOM05D006137 ORTHO05D007697 2.8e-93 346.3 317 55.8
QL12p001513 Quercus lobata HOM05D006137 ORTHO05D007697 3.6e-93 345.9 314 58.3
BolC4t27919H Brassica oleracea HOM05D006137 ORTHO05D007697 6.2e-93 345.1 349 52.7
Carub.0004s1719 Capsella rubella HOM05D006137 ORTHO05D007697 6.2e-93 345.1 322 55.9
RcHm_v2.0_Chr7g0211741 Rosa chinensis HOM05D006137 ORTHO05D007697 8.1e-93 344.7 283 60.4
FAN18G2668 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.1e-92 344.4 271 62.7
FAN08G1929 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.4e-92 344.0 283 60.8
C04p64320 Brassica napus HOM05D006137 ORTHO05D007697 1.8e-92 343.6 291 58.8
ClCG10G001310 Citrullus lanatus HOM05D006137 ORTHO05D007697 1.8e-92 343.6 275 62.2
BraA04t18192Z Brassica rapa HOM05D006137 ORTHO05D007697 2.3e-92 343.2 347 52.4
A04p26930 Brassica napus HOM05D006137 ORTHO05D007697 4.0e-92 342.4 347 52.4
Potri.003G096600 Populus trichocarpa HOM05D006137 ORTHO05D007697 4.0e-92 342.4 319 56.7
Ciclev10001458m.g Citrus clementina HOM05D006137 ORTHO05D007697 5.2e-92 342.0 289 59.5
HanXRQChr04g0098961 Helianthus annuus HOM05D006137 ORTHO05D007697 5.2e-92 342.0 290 59.3
FAN04G0555 Fragaria x ananassa HOM05D006137 ORTHO05D007697 6.8e-92 341.7 283 60.1
MELO3C013825.2 Cucumis melo HOM05D006137 ORTHO05D007697 1.2e-91 340.9 327 56.0
COL.COLO4_16947 Corchorus olitorius HOM05D006137 ORTHO05D007697 1.5e-91 340.5 270 62.2
Lalb_Chr09g0325501 Lupinus albus HOM05D006137 ORTHO05D007697 1.5e-91 340.5 285 60.4
VMungo1215G0535 Vigna mungo HOM05D006137 ORTHO05D007697 2.0e-91 340.1 285 61.4
THA.LOC104814417 Tarenaya hassleriana HOM05D006137 ORTHO05D007697 5.8e-91 338.6 295 56.6
TWI15G1160 Tripterygium wilfordii HOM05D006137 ORTHO05D007697 5.8e-91 338.6 341 54.3
CsaV3_3G001380 Cucumis sativus L. HOM05D006137 ORTHO05D007697 7.5e-91 338.2 323 55.1
TPR.G19427 Trifolium pratense HOM05D006137 ORTHO05D007697 1.3e-90 337.4 329 56.5
CANSAT21G0809 Cannabis sativa HOM05D006137 ORTHO05D007697 2.9e-90 336.3 285 60.4
Lj3g0008594 Lotus japonicus HOM05D006137 ORTHO05D007697 2.9e-90 336.3 293 59.0
PGR042G0393 Punica granatum HOM05D006137 ORTHO05D007697 2.9e-90 336.3 322 55.3
CANSAT21G0548 Cannabis sativa HOM05D006137 ORTHO05D007697 1.1e-89 334.3 285 60.0
Medtr5g029550 Medicago truncatula HOM05D006137 ORTHO05D007697 1.1e-89 334.3 275 61.1
Phvul.002G137400 Phaseolus vulgaris HOM05D006137 ORTHO05D007697 1.4e-89 334.0 316 56.0
Glyma.01G014900 Glycine max HOM05D006137 ORTHO05D007697 2.4e-89 333.2 329 55.6
DCAR_008226 Daucus carota HOM05D006137 ORTHO05D007697 4.1e-89 332.4 271 63.1
Oeu033557.2 Olea europaea HOM05D006137 ORTHO05D007697 4.1e-89 332.4 195 87.2
FAN13G2862 Fragaria x ananassa HOM05D006137 ORTHO05D007697 5.4e-89 332.0 300 57.3
FAN18G2637 Fragaria x ananassa HOM05D006137 ORTHO05D007697 5.4e-89 332.0 318 54.7
FAN24G0436 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.1e-88 330.1 336 52.4
Sabra03G0065200 Salix brachista HOM05D006137 ORTHO05D007697 2.7e-88 329.7 279 60.2
EL10Ac2g03238 Beta vulgaris HOM05D006137 ORTHO05D007697 4.6e-88 328.9 271 61.3
BcaC02g07708 Brassica carinata HOM05D006137 ORTHO05D007697 6.0e-88 328.6 270 60.4
FvH4_2g06760 Fragaria vesca HOM05D006137 ORTHO05D007697 6.0e-88 328.6 327 53.2
PSO782G3150 Papaver somniferum HOM05D006137 ORTHO05D007697 1.7e-87 327.0 292 55.1
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea HOM05D006137 ORTHO05D007697 2.3e-87 326.6 275 59.6
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea HOM05D006137 ORTHO05D007697 2.3e-87 326.6 275 59.6
Lsat_1_v5_gn_6_3681 Lactuca sativa HOM05D006137 ORTHO05D007697 1.6e-85 320.5 310 54.2
PSO063G4597 Papaver somniferum HOM05D006137 ORTHO05D007697 3.1e-84 316.2 275 56.4
Psat2g138120 Pisum sativum HOM05D006137 ORTHO05D007697 3.4e-83 312.8 286 57.0
ATR0829G218 Amborella trichopoda HOM05D006137 ORTHO05D007697 4.4e-83 312.4 273 57.1
Ah.09g233490 Amaranthus hybridus HOM05D006137 ORTHO05D007697 9.9e-83 311.2 275 58.2
Sed0022354 Sechium edule HOM05D006137 ORTHO05D007697 2.9e-82 309.7 270 57.0
Aa31LG9G15490 Aethionema arabicum HOM05D006137 ORTHO05D007697 3.5e-80 302.8 238 61.8
HPP92_014848 Vanilla planifolia HOM05D006137 ORTHO05D007697 7.8e-80 301.6 303 51.5
Lj2A232T29 Lonicera japonica HOM05D006137 ORTHO05D007697 1.0e-79 301.2 326 52.8
Os10g0577700 Oryza sativa ssp. japonica HOM05D006137 ORTHO05D007697 6.8e-76 288.5 271 52.4
Haze_08142 Corylus avellana HOM05D006137 ORTHO05D007697 1.2e-75 287.7 493 37.5
Eucgr.E00233 Eucalyptus grandis HOM05D006137 ORTHO05D007697 5.8e-75 285.4 233 60.1
CDE06G2536 Ceratophyllum demersum HOM05D006137 ORTHO05D007697 3.8e-74 282.7 310 49.4
Prupe.5G028300 Prunus persica HOM05D006137 ORTHO05D007697 1.6e-72 277.3 305 49.2
Zm00001eb025030 Zea mays HOM05D006137 ORTHO05D007697 5.1e-71 272.3 324 45.4
Eucgr.E00231 Eucalyptus grandis HOM05D006137 ORTHO05D007697 2.1e-69 266.9 261 52.9
SEGI_14560 Sequoiadendron giganteum HOM05D006137 ORTHO05D007697 8.1e-69 265.0 277 49.8
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis HOM05D006137 ORTHO05D007697 4.0e-60 236.1 276 42.8
Manes.15G185701 Manihot esculenta HOM05D006137 ORTHO05D007697 2.0e-59 233.8 214 57.0
Mapoly0006s0263 Marchantia polymorpha HOM05D006137 ORTHO05D007697 3.2e-57 226.5 276 42.0
FAN20G1935 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.2e-56 224.6 292 45.2
SMO228G0118 Selaginella moellendorffii HOM05D006137 ORTHO05D007697 2.3e-55 220.3 277 42.2
Ca_25185_v3 Cicer arietinum L. HOM05D006137 ORTHO05D007697 2.5e-54 216.9 214 53.3
Pp3c12_17740 Physcomitrium patens HOM05D006137 ORTHO05D007697 1.3e-50 204.5 326 35.6
AUR62002645 Chenopodium quinoa HOM05D006137 ORTHO05D007697 1.1e-41 174.9 201 46.8
Hund09821 Selenicereus undatus HOM05D006137 ORTHO05D000006 2.1e-40 170.6 150 57.3
AUR62040998 Chenopodium quinoa HOM05D006137 ORTHO05D007697 5.1e-39 166.0 133 60.2
Hund09822 Selenicereus undatus HOM05D006137 ORTHO05D007697 3.2e-33 146.7 120 62.5
AUR62002644 Chenopodium quinoa HOM05D006137 ORTHO05D007697 6.1e-32 142.5 120 60.8
C03p78000 Brassica napus HOM05D006137 ORTHO05D007697 3.3e-30 136.7 145 51.0
Glyma.07G152633 Glycine max HOM05D006137 ORTHO05D007697 4.5e-27 126.3 112 59.8
BolC3t20061H Brassica oleracea HOM05D006137 ORTHO05D007697 1.4e-23 114.8 138 44.9
BolC1t02019H Brassica oleracea HOM05D006137 ORTHO05D007697 3.9e-23 113.2 133 44.4
C01p20920 Brassica napus HOM05D006137 ORTHO05D007697 2.0e-22 110.9 138 43.5
AUR62040999 Chenopodium quinoa HOM05D006137 ORTHO05D007697 1.2e-19 101.7 89 57.3
Medtr1g009450 Medicago truncatula HOM05D006137 ORTHO05D007697 8.5e-18 95.5 110 43.6
CBR_g18978 Chara braunii HOM05D006137 ORTHO05D007697 3.0e-15 87.0 166 34.3
MCO11G470 Micromonas commoda HOM05D006137 ORTHO05D007697 1.1e-12 78.6 172 28.5
BcaC09g50780 Brassica carinata HOM05D006137 ORTHO05D007697 3.5e-11 73.6 87 50.6
PRCOL_00002339 Prasinoderma coloniale HOM05D006137 ORTHO05D007697 7.2e-09 65.9 143 28.7
MCO12G135 Micromonas commoda HOM05D002058 ORTHO05D003758 1.0e-07 62.0 115 31.3
Migut.H02438 Erythranthe guttata HOM05D002058 ORTHO05D003758 7.5e-06 55.8 160 27.5


User provided reference genes

Program Settings