Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu019523.1 Olea europaea HOM05D004920 ORTHO05D005998 5.0e-27 123.6 60 100.0
Oeu043091.1 Olea europaea HOM05D004920 ORTHO05D005998 2.4e-13 78.2 40 92.5
MSTRG.14155 Avicennia marina HOM05D004920 ORTHO05D005998 8.6e-11 69.7 40 82.5
Oeu025561.1 Olea europaea HOM05D004920 ORTHO05D005998 8.6e-11 69.7 40 82.5
Ciclev10016425m.g Citrus clementina HOM05D004920 ORTHO05D005998 1.9e-10 68.6 41 75.6
Aa31LG9G13860 Aethionema arabicum HOM05D004920 ORTHO05D005998 4.3e-10 67.4 45 68.9
Migut.M01075 Erythranthe guttata HOM05D004920 ORTHO05D005998 4.3e-10 67.4 40 77.5
Cc02_g14330 Coffea canephora HOM05D004920 ORTHO05D005998 7.3e-10 66.6 42 69.0
Nitab4.5_0000138g0010 Nicotiana tabacum HOM05D004920 ORTHO05D005998 7.3e-10 66.6 45 64.4
Nitab4.5_0008952g0010 Nicotiana tabacum HOM05D004920 ORTHO05D005998 7.3e-10 66.6 45 64.4
SGA_v2.0_scaffold16G07660 Striga asiatica HOM05D004920 ORTHO05D005998 7.3e-10 66.6 40 77.5
SGA_v2.0_scaffold341G49353 Striga asiatica HOM05D004920 ORTHO05D005998 7.3e-10 66.6 40 77.5
Peaxi162Scf00367g00049 Petunia axillaris HOM05D004920 ORTHO05D005998 1.6e-09 65.5 45 66.7
THA.LOC104812631 Tarenaya hassleriana HOM05D004920 ORTHO05D005998 1.6e-09 65.5 45 66.7
Cpa.g.sc80.25 Carica papaya HOM05D004920 ORTHO05D005998 2.8e-09 64.7 45 62.2
Haze_06318 Corylus avellana HOM05D004920 ORTHO05D005998 2.8e-09 64.7 41 65.9
Actinidia07625 Actinidia chinensis HOM05D004920 ORTHO05D005998 3.6e-09 64.3 40 72.5
CARHR128130 Cardamine hirsuta HOM05D004920 ORTHO05D005998 3.6e-09 64.3 46 63.0
Cfa000557 Carpinus fangiana HOM05D004920 ORTHO05D005998 3.6e-09 64.3 41 68.3
BcaB06g28727 Brassica carinata HOM05D004920 ORTHO05D005998 4.7e-09 63.9 40 70.0
BcaC02g07783 Brassica carinata HOM05D004920 ORTHO05D005998 4.7e-09 63.9 45 64.4
A04p26140 Brassica napus HOM05D004920 ORTHO05D005998 4.7e-09 63.9 45 64.4
C04p63520 Brassica napus HOM05D004920 ORTHO05D005998 4.7e-09 63.9 45 64.4
BolC4t27823H Brassica oleracea HOM05D004920 ORTHO05D005998 4.7e-09 63.9 45 64.4
BraA04t18117Z Brassica rapa HOM05D004920 ORTHO05D005998 4.7e-09 63.9 45 64.4
Dinv36435 Davidia involucrata HOM05D004920 ORTHO05D005998 6.2e-09 63.5 41 70.7
Thhalv10017133m.g Eutrema salsugineum HOM05D004920 ORTHO05D005998 6.2e-09 63.5 45 62.2
Sed0013972 Sechium edule HOM05D004920 ORTHO05D005998 6.2e-09 63.5 41 65.9
CsaV3_6G050600 Cucumis sativus L. HOM05D004920 ORTHO05D005998 8.1e-09 63.2 41 65.9
Manes.17G051900 Manihot esculenta HOM05D004920 ORTHO05D005998 8.1e-09 63.2 40 72.5
Peaxi162Scf00016g00346 Petunia axillaris HOM05D004920 ORTHO05D005998 8.1e-09 63.2 45 64.4
Potri.004G052200 Populus trichocarpa HOM05D004920 ORTHO05D005998 8.1e-09 63.2 40 70.0
Sabra04G0033000 Salix brachista HOM05D004920 ORTHO05D005998 8.1e-09 63.2 40 70.0
ClCG01G023480 Citrullus lanatus HOM05D004920 ORTHO05D005998 1.1e-08 62.8 41 65.9
MELO3C007238.2 Cucumis melo HOM05D004920 ORTHO05D005998 1.1e-08 62.8 41 65.9
Thecc.06G177000 Theobroma cacao HOM05D004920 ORTHO05D005998 1.1e-08 62.8 45 60.0
CAN.G160.23 Capsicum annuum HOM05D004920 ORTHO05D005998 1.4e-08 62.4 45 62.2
CAN.G1961.2 Capsicum annuum HOM05D004920 ORTHO05D005998 1.4e-08 62.4 45 62.2
Duzib235G1063 Durio zibethinus HOM05D004920 ORTHO05D005998 1.8e-08 62.0 40 65.0
Sed0019770 Sechium edule HOM05D004920 ORTHO05D005998 1.8e-08 62.0 41 65.9
AL4G29930 Arabidopsis lyrata HOM05D004920 ORTHO05D005998 2.3e-08 61.6 45 62.2
Carub.0004s1568 Capsella rubella HOM05D004920 ORTHO05D005998 2.3e-08 61.6 45 62.2
Sp4g16400 Schrenkiella parvula HOM05D004920 ORTHO05D005998 2.3e-08 61.6 45 62.2
TAR624G0520 Trochodendron aralioides HOM05D004920 ORTHO05D005998 2.3e-08 61.6 40 72.5
CiPaw.09G066500 Carya illinoinensis HOM05D004920 ORTHO05D005998 4.0e-08 60.8 41 61.0
Solyc02g031770.4 Solanum lycopersicum HOM05D004920 ORTHO05D005998 4.0e-08 60.8 40 67.5
Sopen02g010080 Solanum pennellii HOM05D004920 ORTHO05D005998 4.0e-08 60.8 40 67.5
THA.LOC104814688 Tarenaya hassleriana HOM05D004920 ORTHO05D005998 4.0e-08 60.8 45 62.2
BcaB02g10610 Brassica carinata HOM05D004920 ORTHO05D005998 5.2e-08 60.5 45 57.8
Sc17g0005830 Simmondsia chinensis HOM05D004920 ORTHO05D005998 5.2e-08 60.5 41 63.4
TWI38G1999 Tripterygium wilfordii HOM05D004920 ORTHO05D005998 5.2e-08 60.5 45 62.2
A05p11610 Brassica napus HOM05D004920 ORTHO05D005998 8.9e-08 59.7 45 57.8
C04p15060 Brassica napus HOM05D004920 ORTHO05D005998 8.9e-08 59.7 45 57.8
BolC4t23082H Brassica oleracea HOM05D004920 ORTHO05D005998 8.9e-08 59.7 45 57.8
BraA05t20108Z Brassica rapa HOM05D004920 ORTHO05D005998 8.9e-08 59.7 45 57.8
Hund21192 Selenicereus undatus HOM05D004920 ORTHO05D005998 1.2e-07 59.3 40 65.0
vmacro15953 Vaccinium macrocarpon HOM05D004920 ORTHO05D005998 1.2e-07 59.3 46 63.0
Aqoxy1G02218 Aquilegia oxysepala HOM05D004920 ORTHO05D005998 1.5e-07 58.9 41 63.4
Dinv40630 Davidia involucrata HOM05D004920 ORTHO05D005998 1.5e-07 58.9 45 62.2
Gohir.D05G160000 Gossypium hirsutum HOM05D004920 ORTHO05D005998 1.5e-07 58.9 41 58.5
AT2G34050 Arabidopsis thaliana HOM05D004920 ORTHO05D005998 2.0e-07 58.5 45 60.0
Hma1.2p1_0155F.1_g068520 Hydrangea macrophylla HOM05D004920 ORTHO05D005998 2.0e-07 58.5 40 65.0
PSO063G1259 Papaver somniferum HOM05D004920 ORTHO05D005998 2.0e-07 58.5 38 71.1
Prupe.4G056300 Prunus persica HOM05D004920 ORTHO05D005998 2.0e-07 58.5 41 58.5
Gorai.009G165000 Gossypium raimondii HOM05D004920 ORTHO05D005998 3.4e-07 57.8 40 60.0
PGR004G0415 Punica granatum HOM05D004920 ORTHO05D005998 3.4e-07 57.8 38 60.5
PGR046G0004 Punica granatum HOM05D004920 ORTHO05D005998 3.4e-07 57.8 38 60.5
Ah.05g178940 Amaranthus hybridus HOM05D004920 ORTHO05D005998 4.4e-07 57.4 40 65.0
GSVIVG01021153001 Vitis vinifera HOM05D004920 ORTHO05D005998 4.4e-07 57.4 40 60.0
FAN25G0865 Fragaria x ananassa HOM05D004920 ORTHO05D005998 5.8e-07 57.0 46 52.2
Nn2g14559 Nelumbo nucifera HOM05D004920 ORTHO05D005998 5.8e-07 57.0 40 62.5
FAN21G0445 Fragaria x ananassa HOM05D004920 ORTHO05D005998 7.6e-07 56.6 46 52.2
Gohir.D01G045600 Gossypium hirsutum HOM05D004920 ORTHO05D005998 7.6e-07 56.6 40 57.5
Gorai.002G065200 Gossypium raimondii HOM05D004920 ORTHO05D005998 9.9e-07 56.2 40 60.0
Atru.chr10.1743 Acer truncatum HOM05D004920 ORTHO05D005998 1.7e-06 55.5 41 58.5
FvH4_3g08250 Fragaria vesca HOM05D004920 ORTHO05D005998 1.7e-06 55.5 45 51.1
FvH4_7g02080 Fragaria vesca HOM05D004920 ORTHO05D005998 1.7e-06 55.5 45 51.1
FAN03G1929 Fragaria x ananassa HOM05D004920 ORTHO05D005998 1.7e-06 55.5 45 51.1
FAN06G4868 Fragaria x ananassa HOM05D004920 ORTHO05D005998 1.7e-06 55.5 45 51.1
FAN11G1044 Fragaria x ananassa HOM05D004920 ORTHO05D005998 1.7e-06 55.5 45 51.1
FAN16G1146 Fragaria x ananassa HOM05D004920 ORTHO05D005998 1.7e-06 55.5 45 51.1
MBI07_g06434_MAGBIO Magnolia biondii HOM05D004920 ORTHO05D005998 1.7e-06 55.5 40 62.5
Medtr4g087955 Medicago truncatula HOM05D004920 ORTHO05D005998 1.7e-06 55.5 40 60.0
Rhsim06G0035100 Rhododendron simsii HOM05D004920 ORTHO05D005998 1.7e-06 55.5 49 55.1
RcHm_v2.0_Chr5g0009901 Rosa chinensis HOM05D004920 ORTHO05D005998 1.7e-06 55.5 45 51.1
TPR.G17014 Trifolium pratense HOM05D004920 ORTHO05D005998 1.7e-06 55.5 41 53.7
MD05G1306300 Malus domestica HOM05D004920 ORTHO05D005998 2.2e-06 55.1 41 53.7
QL04p069158 Quercus lobata HOM05D004920 ORTHO05D005998 2.2e-06 55.1 40 57.5
VMungo1127G0753 Vigna mungo HOM05D004920 ORTHO05D005998 2.2e-06 55.1 40 55.0
EL10Ac1g01008 Beta vulgaris HOM05D004920 ORTHO05D005998 2.9e-06 54.7 40 57.5
CDE02G3849 Ceratophyllum demersum HOM05D004920 ORTHO05D005998 2.9e-06 54.7 45 55.6
HanXRQChr15g0481321 Helianthus annuus HOM05D004920 ORTHO05D005998 2.9e-06 54.7 45 53.3
PSO541G3866 Papaver somniferum HOM05D004920 ORTHO05D005998 2.9e-06 54.7 38 65.8
PSO675G0526 Papaver somniferum HOM05D004920 ORTHO05D005998 2.9e-06 54.7 38 65.8
CANSAT35G1037 Cannabis sativa HOM05D004920 ORTHO05D005998 3.7e-06 54.3 41 53.7
Gohir.A05G157100 Gossypium hirsutum HOM05D004920 ORTHO05D005998 3.7e-06 54.3 39 56.4
Ca_10660_v3 Cicer arietinum L. HOM05D004920 ORTHO05D005998 4.9e-06 53.9 40 55.0
DCAR_007975 Daucus carota HOM05D004920 ORTHO05D005998 6.4e-06 53.5 40 62.5
Glyma.12G114600 Glycine max HOM05D004920 ORTHO05D005998 6.4e-06 53.5 40 50.0
Lsat_1_v5_gn_7_23761 Lactuca sativa HOM05D004920 ORTHO05D005998 8.4e-06 53.1 38 60.5
TPR.G16259 Trifolium pratense HOM05D004920 ORTHO05D005998 8.4e-06 53.1 40 52.5
HPP92_018237 Vanilla planifolia HOM05D004920 ORTHO05D005998 8.4e-06 53.1 40 60.0


User provided reference genes

Program Settings