Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu019435.1 Olea europaea HOM05D005869 ORTHO05D007229 5.1e-151 537.7 273 100.0
Oeu044507.2 Olea europaea HOM05D005869 ORTHO05D007229 3.6e-88 328.9 285 66.0
Migut.K01077 Erythranthe guttata HOM05D005869 ORTHO05D007229 1.0e-58 231.1 278 51.4
Nitab4.5_0002899g0010 Nicotiana tabacum HOM05D005869 ORTHO05D007229 4.3e-57 225.7 277 52.3
Potri.003G163800 Populus trichocarpa HOM05D005869 ORTHO05D007229 7.3e-57 224.9 274 50.4
Hma1.2p1_1834F.1_g304595 Hydrangea macrophylla HOM05D005869 ORTHO05D007229 1.6e-56 223.8 281 49.5
MSTRG.8047 Avicennia marina HOM05D005869 ORTHO05D007229 2.1e-56 223.4 287 49.8
vmacro16076 Vaccinium macrocarpon HOM05D005869 ORTHO05D007229 1.4e-55 220.7 297 46.5
GSVIVG01004938001 Vitis vinifera HOM05D005869 ORTHO05D007229 1.4e-55 220.7 291 47.1
CSS0039203 Camellia sinensis var. sinensis HOM05D005869 ORTHO05D007229 1.8e-55 220.3 287 48.4
PGSC0003DMG400014477 Solanum tuberosum HOM05D005869 ORTHO05D007229 4.0e-55 219.2 274 50.0
Sabra01G0045900 Salix brachista HOM05D005869 ORTHO05D007229 5.8e-54 215.3 278 50.0
Thecc.02G194400 Theobroma cacao HOM05D005869 ORTHO05D007229 7.5e-54 214.9 278 47.5
Rhsim12G0098100 Rhododendron simsii HOM05D005869 ORTHO05D007229 1.3e-53 214.2 294 47.3
Duzib132G0160 Durio zibethinus HOM05D005869 ORTHO05D007229 2.9e-53 213.0 277 46.9
Gohir.D02G175000 Gossypium hirsutum HOM05D005869 ORTHO05D007229 3.7e-53 212.6 278 47.5
Gohir.A03G152800 Gossypium hirsutum HOM05D005869 ORTHO05D007229 1.4e-52 210.7 278 46.8
Potri.001G066000 Populus trichocarpa HOM05D005869 ORTHO05D007229 1.4e-52 210.7 290 47.2
Solyc12g041880.2 Solanum lycopersicum HOM05D005869 ORTHO05D007229 1.9e-52 210.3 279 49.1
Sopen12g020650 Solanum pennellii HOM05D005869 ORTHO05D007229 2.4e-52 209.9 279 48.4
Atru.chr11.2424 Acer truncatum HOM05D005869 ORTHO05D007229 4.1e-52 209.1 274 48.9
Gorai.005G196600 Gossypium raimondii HOM05D005869 ORTHO05D007229 4.1e-52 209.1 278 47.1
Peaxi162Scf00128g01773 Petunia axillaris HOM05D005869 ORTHO05D007229 5.4e-52 208.8 278 48.6
TWI36G0175 Tripterygium wilfordii HOM05D005869 ORTHO05D007229 1.6e-51 207.2 287 47.0
Actinidia09599 Actinidia chinensis HOM05D005869 ORTHO05D007229 4.6e-51 205.7 281 47.7
TAR622G0237 Trochodendron aralioides HOM05D005869 ORTHO05D007229 2.3e-50 203.4 287 48.4
Duzib052G0289 Durio zibethinus HOM05D005869 ORTHO05D007229 1.9e-49 200.3 284 46.1
Lj6A836G36 Lonicera japonica HOM05D005869 ORTHO05D007229 1.9e-49 200.3 263 47.5
Prupe.1G217100 Prunus persica HOM05D005869 ORTHO05D007229 2.5e-49 199.9 285 45.6
SGA_v2.0_scaffold201G41354 Striga asiatica HOM05D005869 ORTHO05D007229 3.3e-49 199.5 301 45.5
Ciclev10032244m.g Citrus clementina HOM05D005869 ORTHO05D007229 7.3e-49 198.4 287 44.3
Cc11_g15130 Coffea canephora HOM05D005869 ORTHO05D007229 7.3e-49 198.4 276 46.4
CiPaw.05G102600 Carya illinoinensis HOM05D005869 ORTHO05D007229 2.1e-48 196.8 301 46.2
Dinv19137 Davidia involucrata HOM05D005869 ORTHO05D007229 8.1e-48 194.9 172 58.1
RcHm_v2.0_Chr4g0429061 Rosa chinensis HOM05D005869 ORTHO05D007229 2.4e-47 193.4 288 43.4
Nn4g22166 Nelumbo nucifera HOM05D005869 ORTHO05D007229 2.0e-46 190.3 286 43.4
THA.LOC104820535 Tarenaya hassleriana HOM05D005869 ORTHO05D007229 2.6e-46 189.9 280 42.1
PSO478G4440 Papaver somniferum HOM05D005869 ORTHO05D007229 7.6e-46 188.3 289 45.3
PSO017G3988 Papaver somniferum HOM05D005869 ORTHO05D007229 1.7e-45 187.2 292 44.9
Manes.08G102300 Manihot esculenta HOM05D005869 ORTHO05D007229 2.9e-45 186.4 286 44.1
BraA07t28937Z Brassica rapa HOM05D005869 ORTHO05D007229 4.9e-45 185.7 283 41.0
A07p11480 Brassica napus HOM05D005869 ORTHO05D007229 1.1e-44 184.5 276 41.3
ATR0829G022 Amborella trichopoda HOM05D005869 ORTHO05D007229 1.4e-44 184.1 282 42.9
Aqoxy5G03171 Aquilegia oxysepala HOM05D005869 ORTHO05D007229 1.4e-44 184.1 291 44.3
BcaC06g35333 Brassica carinata HOM05D005869 ORTHO05D007229 1.4e-44 184.1 283 41.0
Nitab4.5_0000608g0060 Nicotiana tabacum HOM05D005869 ORTHO05D007229 1.4e-44 184.1 170 57.6
PGR102G3220 Punica granatum HOM05D005869 ORTHO05D007229 1.4e-44 184.1 277 44.4
Thhalv10008411m.g Eutrema salsugineum HOM05D005869 ORTHO05D007229 1.9e-44 183.7 284 41.5
MD13G1129300 Malus domestica HOM05D005869 ORTHO05D007229 1.9e-44 183.7 280 43.2
Carub.0001s2653 Capsella rubella HOM05D005869 ORTHO05D007229 5.4e-44 182.2 283 41.3
Eucgr.B03550 Eucalyptus grandis HOM05D005869 ORTHO05D007229 9.3e-44 181.4 286 44.4
CARHR027570 Cardamine hirsuta HOM05D005869 ORTHO05D007229 3.5e-43 179.5 284 41.5
FvH4_4g22830 Fragaria vesca HOM05D005869 ORTHO05D007229 4.6e-43 179.1 284 40.1
MD16G1129300 Malus domestica HOM05D005869 ORTHO05D007229 4.6e-43 179.1 281 44.8
Sp1g24290 Schrenkiella parvula HOM05D005869 ORTHO05D007229 4.6e-43 179.1 283 40.6
EL10Ac6g13596 Beta vulgaris HOM05D005869 ORTHO05D007229 1.0e-42 177.9 279 41.6
BolC7t42232H Brassica oleracea HOM05D005869 ORTHO05D007229 1.3e-42 177.6 288 39.6
BcaC05g26814 Brassica carinata HOM05D005869 ORTHO05D007229 3.0e-42 176.4 274 42.0
AL1G41620 Arabidopsis lyrata HOM05D005869 ORTHO05D007229 3.9e-42 176.0 283 40.3
AT1G28100 Arabidopsis thaliana HOM05D005869 ORTHO05D007229 3.9e-42 176.0 283 40.6
BraA09t39308Z Brassica rapa HOM05D005869 ORTHO05D007229 3.9e-42 176.0 278 41.7
TPR.G35001 Trifolium pratense HOM05D005869 ORTHO05D007229 3.9e-42 176.0 275 44.4
C07p17290 Brassica napus HOM05D005869 ORTHO05D007229 5.1e-42 175.6 281 39.5
Ah.03g135600 Amaranthus hybridus HOM05D005869 ORTHO05D007229 1.9e-41 173.7 277 41.9
C05p26800 Brassica napus HOM05D005869 ORTHO05D007229 2.5e-41 173.3 273 41.4
Sed0007329 Sechium edule HOM05D005869 ORTHO05D007229 2.5e-41 173.3 272 42.3
AUR62005704 Chenopodium quinoa HOM05D005869 ORTHO05D007229 9.6e-41 171.4 267 41.6
BcaB07g32415 Brassica carinata HOM05D005869 ORTHO05D007229 1.3e-40 171.0 286 40.9
ClCG07G011870 Citrullus lanatus HOM05D005869 ORTHO05D007229 1.3e-40 171.0 271 41.3
A09p37960 Brassica napus HOM05D005869 ORTHO05D007229 1.6e-40 170.6 268 41.0
CsaV3_4G002340 Cucumis sativus L. HOM05D005869 ORTHO05D007229 2.8e-40 169.9 269 42.4
BolC5t31401H Brassica oleracea HOM05D005869 ORTHO05D007229 3.6e-40 169.5 278 41.0
Medtr2g072940 Medicago truncatula HOM05D005869 ORTHO05D007229 4.8e-40 169.1 280 42.5
Aa31sc1106G20 Aethionema arabicum HOM05D005869 ORTHO05D007229 6.2e-40 168.7 326 36.2
MELO3C017808.2 Cucumis melo HOM05D005869 ORTHO05D007229 2.4e-39 166.8 270 40.7
Psat1g007680 Pisum sativum HOM05D005869 ORTHO05D007229 3.4e-38 162.9 282 40.4
HPP92_000723 Vanilla planifolia HOM05D005869 ORTHO05D007229 3.4e-38 162.9 275 40.0
Zm00001eb044420 Zea mays HOM05D005869 ORTHO05D007229 4.4e-38 162.5 286 41.3
CDE05G0434 Ceratophyllum demersum HOM05D005869 ORTHO05D007229 1.7e-37 160.6 278 40.3
Phvul.005G075700 Phaseolus vulgaris HOM05D005869 ORTHO05D007229 2.2e-37 160.2 281 39.9
Lj3g0004461 Lotus japonicus HOM05D005869 ORTHO05D007229 3.8e-37 159.5 281 40.6
Glyma.13G264200 Glycine max HOM05D005869 ORTHO05D007229 1.4e-36 157.5 281 40.2
ECA233G2015 Erigeron canadensis HOM05D005869 ORTHO05D007229 2.4e-36 156.8 278 40.3
arahy.Tifrunner.gnm1.ann1.WRPQ8T Arachis hypogaea HOM05D005869 ORTHO05D007229 4.2e-36 156.0 277 40.4
VMungo1080G1469 Vigna mungo HOM05D005869 ORTHO05D007229 2.1e-35 153.7 285 39.6
HanXRQChr12g0363371 Helianthus annuus HOM05D005869 ORTHO05D007229 4.6e-35 152.5 275 38.5
arahy.Tifrunner.gnm1.ann1.3C70LE Arachis hypogaea HOM05D005869 ORTHO05D007229 2.3e-34 150.2 277 40.1
COL.COLO4_06415 Corchorus olitorius HOM05D005869 ORTHO05D007229 3.0e-34 149.8 148 51.4
Lalb_Chr25g0285611 Lupinus albus HOM05D005869 ORTHO05D007229 3.9e-34 149.4 280 39.6
HanXRQChr08g0210441 Helianthus annuus HOM05D005869 ORTHO05D007229 8.7e-34 148.3 272 41.2
CANSAT01G1948 Cannabis sativa HOM05D005869 ORTHO05D007229 1.9e-33 147.1 244 40.6
SalBow7G3994 Salvia bowleyana HOM05D005869 ORTHO05D007229 5.6e-33 145.6 299 39.5
Haze_12488 Corylus avellana HOM05D005869 ORTHO05D007229 7.3e-33 145.2 170 48.8
SalBow2G1918 Salvia bowleyana HOM05D005869 ORTHO05D007229 7.3e-33 145.2 317 37.9
Hund16126 Selenicereus undatus HOM05D005869 ORTHO05D007229 3.1e-31 139.8 196 43.9
Manes.09G187100 Manihot esculenta HOM05D005869 ORTHO05D007229 2.6e-30 136.7 209 43.1
QL03p049770 Quercus lobata HOM05D005869 ORTHO05D007229 4.9e-29 132.5 115 60.9
Sc04g0000090 Simmondsia chinensis HOM05D005869 ORTHO05D007229 7.1e-28 128.6 155 47.1
Sc04g0000050 Simmondsia chinensis HOM05D005869 ORTHO05D007229 9.3e-28 128.3 155 46.5
Ca_03922_v3 Cicer arietinum L. HOM05D005869 ORTHO05D007229 2.1e-27 127.1 153 45.8
HanXRQChr08g0210391 Helianthus annuus HOM05D005869 ORTHO05D007229 1.9e-25 120.6 276 35.1
MBI11_g11870_MAGBIO Magnolia biondii HOM05D000422 ORTHO05D001248 7.4e-25 118.6 312 34.0
Pp3c14_12070 Physcomitrium patens HOM05D005869 ORTHO05D007229 4.8e-24 115.9 273 34.4
Migut.K01075 Erythranthe guttata HOM05D005869 ORTHO05D007229 2.4e-23 113.6 295 33.2
Sed0028093 Sechium edule HOM05D005869 ORTHO05D007229 3.1e-23 113.2 304 34.2
MSTRG.8048 Avicennia marina HOM05D005869 ORTHO05D007229 7.6e-22 108.6 283 33.2
Sabra03G0119100 Salix brachista HOM05D005869 ORTHO05D007229 1.4e-20 104.4 165 44.8
Lsat_1_v5_gn_4_151180 Lactuca sativa HOM05D005869 ORTHO05D007229 2.5e-20 103.6 245 36.3
AagrBONN_evm.TU.Sc2ySwM_368.1764 Anthoceros agrestis HOM05D005869 ORTHO05D007229 2.1e-19 100.5 273 32.2
FAN12G1770 Fragaria x ananassa HOM05D000001 ORTHO05D010470 3.0e-18 96.7 276 32.6
Cpa.g.sc498.3 Carica papaya HOM05D005869 ORTHO05D007229 5.1e-18 95.9 170 41.2
FAN07G2435 Fragaria x ananassa HOM05D000001 ORTHO05D010470 8.7e-18 95.1 276 32.2
FAN17G1058 Fragaria x ananassa HOM05D000001 ORTHO05D010470 1.1e-17 94.7 276 32.6
Mapoly0153s0008 Marchantia polymorpha HOM05D005869 ORTHO05D007229 1.1e-17 94.7 292 29.8
Migut.O00624 Erythranthe guttata HOM05D005869 ORTHO05D007229 1.5e-17 94.4 192 34.9
unitig_26.g10430 Utricularia gibba HOM05D005869 ORTHO05D007229 4.8e-16 89.4 172 35.5
Migut.K01073 Erythranthe guttata HOM05D005869 ORTHO05D007229 4.1e-15 86.3 109 47.7
QL03p049767 Quercus lobata HOM05D005869 ORTHO05D007229 5.0e-13 79.3 157 39.5
Cre03.g194450 Chlamydomonas reinhardtii HOM05D005869 ORTHO05D007229 1.4e-12 77.8 289 27.7
Migut.K01074 Erythranthe guttata HOM05D005869 ORTHO05D007229 1.4e-12 77.8 151 39.7
BcaB03g13954 Brassica carinata HOM05D005869 ORTHO05D007229 1.9e-12 77.4 176 35.8
CBR_g3946 Chara braunii HOM05D005869 ORTHO05D007229 5.1e-10 69.3 281 26.7
MCO09G131 Micromonas commoda HOM05D005869 ORTHO05D007229 4.3e-09 66.2 282 27.0
BcaC05g26813 Brassica carinata HOM05D005869 ORTHO05D007229 5.3e-07 59.3 74 54.1
SEGI_05009 Sequoiadendron giganteum HOM05D005869 ORTHO05D007229 1.5e-06 57.8 93 39.8
PRCOL_00000815 Prasinoderma coloniale HOM05D005869 ORTHO05D007229 2.0e-06 57.4 296 24.3
Pp3c14_11090 Physcomitrium patens HOM05D005869 ORTHO05D007229 2.6e-06 57.0 100 36.0
Sc04g0000040 Simmondsia chinensis HOM05D005869 ORTHO05D007229 3.4e-06 56.6 73 53.4
Sc04g0000100 Simmondsia chinensis HOM05D005869 ORTHO05D007229 3.4e-06 56.6 73 53.4


User provided reference genes

Program Settings