Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu019374.1 Olea europaea HOM05D000231 ORTHO05D000132 2.1e-103 379.0 189 100.0
Lalb_Chr03g0029081 Lupinus albus HOM05D000231 ORTHO05D000132 4.6e-10 68.9 95 42.1
GSVIVG01000451001 Vitis vinifera HOM05D000231 ORTHO05D000132 4.6e-10 68.9 136 33.8
Lalb_Chr14g0366521 Lupinus albus HOM05D000231 ORTHO05D000132 7.9e-10 68.2 136 32.4
Sabra11G0027600 Salix brachista HOM05D000231 ORTHO05D000132 1.8e-09 67.0 107 37.4
Gohir.D04G146400 Gossypium hirsutum HOM05D000231 ORTHO05D000132 2.3e-09 66.6 109 34.9
Gorai.012G132300 Gossypium raimondii HOM05D000231 ORTHO05D000132 2.3e-09 66.6 109 34.9
Lj2C279T1 Lonicera japonica HOM05D000231 ORTHO05D000132 2.3e-09 66.6 112 34.8
Actinidia05151 Actinidia chinensis HOM05D026598 ORTHO05D021078 3.0e-09 66.2 84 47.6
Rhsim06G0153500 Rhododendron simsii HOM05D000231 ORTHO05D000132 3.0e-09 66.2 93 39.8
Sc12g0002610 Simmondsia chinensis HOM05D000231 ORTHO05D000132 3.0e-09 66.2 95 42.1
Sc12g0003930 Simmondsia chinensis HOM05D000231 ORTHO05D000132 3.0e-09 66.2 95 42.1
Manes.17G034200 Manihot esculenta HOM05D000231 ORTHO05D000132 3.9e-09 65.9 96 36.5
Potri.004G032100 Populus trichocarpa HOM05D000231 ORTHO05D000132 3.9e-09 65.9 95 40.0
Lj1A739T16 Lonicera japonica HOM05D000231 ORTHO05D000132 6.7e-09 65.1 90 37.8
GSVIVG01003674001 Vitis vinifera HOM05D000231 ORTHO05D000132 8.7e-09 64.7 95 37.9
arahy.Tifrunner.gnm1.ann1.HLP8WR Arachis hypogaea HOM05D000231 ORTHO05D000132 1.1e-08 64.3 95 40.0
arahy.Tifrunner.gnm1.ann1.L9YRC6 Arachis hypogaea HOM05D000231 ORTHO05D000132 1.1e-08 64.3 84 38.1
arahy.Tifrunner.gnm1.ann1.XQ0FA6 Arachis hypogaea HOM05D000231 ORTHO05D000132 1.1e-08 64.3 84 38.1
Dinv40464 Davidia involucrata HOM05D000231 ORTHO05D000132 1.1e-08 64.3 95 37.9
Potri.011G040900 Populus trichocarpa HOM05D000231 ORTHO05D000132 1.1e-08 64.3 94 36.2
arahy.Tifrunner.gnm1.ann1.487RVS Arachis hypogaea HOM05D000231 ORTHO05D000132 1.5e-08 63.9 95 40.0
Nn1g03831 Nelumbo nucifera HOM05D000231 ORTHO05D000132 1.5e-08 63.9 92 41.3
Manes.16G019191 Manihot esculenta HOM05D000231 ORTHO05D000132 1.9e-08 63.5 96 38.5
PSO832G3486 Papaver somniferum HOM05D000231 ORTHO05D000132 1.9e-08 63.5 95 38.9
Sabra04G0018300 Salix brachista HOM05D000231 ORTHO05D000132 1.9e-08 63.5 95 38.9
TWI36G1570 Tripterygium wilfordii HOM05D000231 ORTHO05D000132 1.9e-08 63.5 139 31.7
Dinv13842 Davidia involucrata HOM05D000231 ORTHO05D000132 2.5e-08 63.2 95 38.9
Phvul.005G109600 Phaseolus vulgaris HOM05D000231 ORTHO05D000132 2.5e-08 63.2 84 38.1
QL08p036571 Quercus lobata HOM05D000231 ORTHO05D000132 2.5e-08 63.2 84 40.5
TAR624G0649 Trochodendron aralioides HOM05D000231 ORTHO05D000132 2.5e-08 63.2 92 39.1
Cfa014506 Carpinus fangiana HOM05D000231 ORTHO05D000132 3.3e-08 62.8 96 36.5
DCAR_012970 Daucus carota HOM05D000231 ORTHO05D000132 4.3e-08 62.4 130 33.8
Glyma.12G199300 Glycine max HOM05D000231 ORTHO05D000132 4.3e-08 62.4 84 36.9
Psat5g266600 Pisum sativum HOM05D000231 ORTHO05D000132 4.3e-08 62.4 136 31.6
TPR.G18051 Trifolium pratense HOM05D000231 ORTHO05D000132 4.3e-08 62.4 136 33.1
VMungo1080G1180 Vigna mungo HOM05D000231 ORTHO05D000132 4.3e-08 62.4 136 30.9
CiPaw.04G121800 Carya illinoinensis HOM05D000231 ORTHO05D000132 5.7e-08 62.0 84 39.3
Glyma.13G303000 Glycine max HOM05D000231 ORTHO05D000132 5.7e-08 62.0 84 36.9
vmacro12253 Vaccinium macrocarpon HOM05D000231 ORTHO05D000132 5.7e-08 62.0 92 39.1
Gohir.A13G057600 Gossypium hirsutum HOM05D000231 ORTHO05D000132 7.4e-08 61.6 91 41.8
Potri.011G040500 Populus trichocarpa HOM05D000231 ORTHO05D000132 7.4e-08 61.6 95 38.9
Sabra11G0027800 Salix brachista HOM05D000231 ORTHO05D000132 7.4e-08 61.6 143 28.7
COL.COLO4_04511 Corchorus olitorius HOM05D000231 ORTHO05D000132 9.7e-08 61.2 92 37.0
DCAR_009711 Daucus carota HOM05D000231 ORTHO05D000132 9.7e-08 61.2 91 38.5
Gorai.013G073100 Gossypium raimondii HOM05D000231 ORTHO05D000132 9.7e-08 61.2 90 38.9
Actinidia12472 Actinidia chinensis HOM05D000231 ORTHO05D000132 1.3e-07 60.8 90 38.9
CSS0014358 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D011714 1.3e-07 60.8 126 38.1
Cfa000336 Carpinus fangiana HOM05D000231 ORTHO05D000132 1.3e-07 60.8 140 31.4
Haze_13051 Corylus avellana HOM05D000231 ORTHO05D000132 1.3e-07 60.8 95 35.8
Gohir.A12G135900 Gossypium hirsutum HOM05D000231 ORTHO05D000132 1.3e-07 60.8 92 37.0
Gohir.D13G064500 Gossypium hirsutum HOM05D000231 ORTHO05D000132 1.3e-07 60.8 90 38.9
Lj3g0008927 Lotus japonicus HOM05D000231 ORTHO05D000132 1.3e-07 60.8 95 34.7
MD17G1086400 Malus domestica HOM05D000231 ORTHO05D000132 1.3e-07 60.8 92 38.0
Rhsim02G0118700 Rhododendron simsii HOM05D000231 ORTHO05D000132 1.3e-07 60.8 92 35.9
Thecc.02G168000 Theobroma cacao HOM05D000231 ORTHO05D000132 1.3e-07 60.8 92 39.1
PGR042G0901 Punica granatum HOM05D000231 ORTHO05D000132 1.6e-07 60.5 92 37.0
Actinidia11817 Actinidia chinensis HOM05D000231 ORTHO05D000132 2.2e-07 60.1 97 38.1
CSS0029889 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D000132 2.2e-07 60.1 92 37.0
CSS0049137 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D000132 2.2e-07 60.1 92 37.0
CiPaw.03G167600 Carya illinoinensis HOM05D000231 ORTHO05D000132 2.2e-07 60.1 95 38.9
Nn1g06823 Nelumbo nucifera HOM05D000231 ORTHO05D000132 2.2e-07 60.1 90 38.9
Eucgr.A01768 Eucalyptus grandis HOM05D000231 ORTHO05D000132 2.8e-07 59.7 90 37.8
Lalb_Chr22g0356271 Lupinus albus HOM05D000231 ORTHO05D000132 2.8e-07 59.7 96 36.5
MBI09_g18087_MAGBIO Magnolia biondii HOM05D000231 ORTHO05D000132 2.8e-07 59.7 90 37.8
Actinidia24051 Actinidia chinensis HOM05D000231 ORTHO05D000132 3.7e-07 59.3 92 38.0
FvH4_6g44360 Fragaria vesca HOM05D000231 ORTHO05D000132 3.7e-07 59.3 82 41.5
FAN09G1693 Fragaria x ananassa HOM05D000231 ORTHO05D000132 3.7e-07 59.3 82 41.5
Gohir.D02G184400 Gossypium hirsutum HOM05D000231 ORTHO05D000132 3.7e-07 59.3 83 41.0
Gohir.D12G139900 Gossypium hirsutum HOM05D000231 ORTHO05D000132 3.7e-07 59.3 92 37.0
Gorai.008G151200 Gossypium raimondii HOM05D000231 ORTHO05D000132 3.7e-07 59.3 92 37.0
Lj1A1215T58 Lonicera japonica HOM05D000231 ORTHO05D000132 3.7e-07 59.3 94 34.0
MD09G1098400 Malus domestica HOM05D000231 ORTHO05D000132 3.7e-07 59.3 92 40.2
Sopen01g010480 Solanum pennellii HOM05D000231 ORTHO05D000132 3.7e-07 59.3 94 37.2
Eucgr.K00895 Eucalyptus grandis HOM05D000231 ORTHO05D000132 4.8e-07 58.9 93 36.6
Gorai.005G206700 Gossypium raimondii HOM05D000231 ORTHO05D000132 4.8e-07 58.9 83 41.0
MBI02_g25181_MAGBIO Magnolia biondii HOM05D000231 ORTHO05D000132 4.8e-07 58.9 92 34.8
Medtr2g089490 Medicago truncatula HOM05D000231 ORTHO05D000132 4.8e-07 58.9 136 31.6
Potri.013G149000 Populus trichocarpa HOM05D000231 ORTHO05D000132 4.8e-07 58.9 95 35.8
Sopen02g014980 Solanum pennellii HOM05D000231 ORTHO05D000132 4.8e-07 58.9 156 28.2
CSS0012884 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D000132 6.3e-07 58.5 96 36.5
CSS0039102 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D000132 6.3e-07 58.5 96 36.5
CAN.G898.2 Capsicum annuum HOM05D000231 ORTHO05D000132 6.3e-07 58.5 130 33.1
Ciclev10017833m.g Citrus clementina HOM05D000231 ORTHO05D000132 6.3e-07 58.5 98 35.7
Cc05_g05930 Coffea canephora HOM05D000231 ORTHO05D000132 6.3e-07 58.5 93 37.6
Duzib248G0900 Durio zibethinus HOM05D000231 ORTHO05D000132 6.3e-07 58.5 93 38.7
RcHm_v2.0_Chr2g0161291 Rosa chinensis HOM05D000231 ORTHO05D000132 6.3e-07 58.5 82 41.5
Ca_01550_v3 Cicer arietinum L. HOM05D000231 ORTHO05D000132 8.2e-07 58.2 136 30.1
FAN02G3177 Fragaria x ananassa HOM05D000231 ORTHO05D000132 8.2e-07 58.2 84 39.3
Gohir.A03G161100 Gossypium hirsutum HOM05D000231 ORTHO05D000132 8.2e-07 58.2 83 39.8
Prupe.3G228000 Prunus persica HOM05D000231 ORTHO05D000132 8.2e-07 58.2 84 39.3
Sed0007932 Sechium edule HOM05D000231 ORTHO05D000132 8.2e-07 58.2 92 34.8
Atru.chr6.3091 Acer truncatum HOM05D000231 ORTHO05D000132 1.1e-06 57.8 91 36.3
CSS0045736 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D011714 1.1e-06 57.8 87 40.2
Duzib235G0444 Durio zibethinus HOM05D000231 ORTHO05D000132 1.1e-06 57.8 95 34.7
Hma1.2p1_1090F.1_g255820 Hydrangea macrophylla HOM05D000231 ORTHO05D000132 1.1e-06 57.8 90 36.7
QL05p080770 Quercus lobata HOM05D000231 ORTHO05D000132 1.1e-06 57.8 94 36.2
Sabra13G0120200 Salix brachista HOM05D000231 ORTHO05D000132 1.1e-06 57.8 93 35.5
Solyc07g054950.2 Solanum lycopersicum HOM05D000231 ORTHO05D000132 1.1e-06 57.8 93 35.5
Atru.chr10.2033 Acer truncatum HOM05D000231 ORTHO05D000132 1.4e-06 57.4 95 34.7
Dinv15511 Davidia involucrata HOM05D000231 ORTHO05D000132 1.4e-06 57.4 92 34.8
FAN05G2885 Fragaria x ananassa HOM05D000231 ORTHO05D000132 1.4e-06 57.4 96 37.5
FAN05G3528 Fragaria x ananassa HOM05D000231 ORTHO05D000132 1.4e-06 57.4 82 40.2
FAN09G4210 Fragaria x ananassa HOM05D000231 ORTHO05D000132 1.4e-06 57.4 82 40.2
MBI18_g36111_MAGBIO Magnolia biondii HOM05D000231 ORTHO05D000132 1.4e-06 57.4 93 36.6
Sabra19G0119200 Salix brachista HOM05D000231 ORTHO05D000132 1.4e-06 57.4 95 35.8
Sopen02g015000 Solanum pennellii HOM05D000231 ORTHO05D000132 1.4e-06 57.4 156 27.6
TAR626G0142 Trochodendron aralioides HOM05D000231 ORTHO05D000132 1.4e-06 57.4 93 37.6
CANSAT64G2327 Cannabis sativa HOM05D000231 ORTHO05D000132 1.8e-06 57.0 135 32.6
Duzib192G0055 Durio zibethinus HOM05D000231 ORTHO05D000132 1.8e-06 57.0 133 30.1
Glyma.15G066200 Glycine max HOM05D000231 ORTHO05D000132 1.8e-06 57.0 84 38.1
Gohir.A11G038550 Gossypium hirsutum HOM05D000231 ORTHO05D000132 1.8e-06 57.0 79 41.8
Lsat_1_v5_gn_1_124201 Lactuca sativa HOM05D000231 ORTHO05D000132 1.8e-06 57.0 125 35.2
Ciclev10015968m.g Citrus clementina HOM05D000231 ORTHO05D000132 2.4e-06 56.6 90 34.4
FAN14G3256 Fragaria x ananassa HOM05D000231 ORTHO05D000132 2.4e-06 56.6 138 32.6
Nn5g30621 Nelumbo nucifera HOM05D000231 ORTHO05D000132 2.4e-06 56.6 79 39.2
Nitab4.5_0003814g0020 Nicotiana tabacum HOM05D000231 ORTHO05D000132 2.4e-06 56.6 131 29.8
Sabra19G0134700 Salix brachista HOM05D000231 ORTHO05D000132 2.4e-06 56.6 95 35.8
Sopen02g014970 Solanum pennellii HOM05D000231 ORTHO05D000132 2.4e-06 56.6 156 27.6
Cc00_g24520 Coffea canephora HOM05D000231 ORTHO05D000132 3.1e-06 56.2 169 29.0
Gohir.A06G122700 Gossypium hirsutum HOM05D000231 ORTHO05D000132 3.1e-06 56.2 130 30.8
Oeu017981.1 Olea europaea HOM05D000231 ORTHO05D000132 3.1e-06 56.2 135 31.1
Peaxi162Scf00007g02126 Petunia axillaris HOM05D000231 ORTHO05D000132 3.1e-06 56.2 93 37.6
Potri.019G118600 Populus trichocarpa HOM05D000231 ORTHO05D000132 3.1e-06 56.2 95 35.8
Nitab4.5_0001039g0060 Nicotiana tabacum HOM05D000231 ORTHO05D000132 4.1e-06 55.8 171 27.5
RcHm_v2.0_Chr6g0309481 Rosa chinensis HOM05D000231 ORTHO05D000132 4.1e-06 55.8 77 39.0
CDE02G4340 Ceratophyllum demersum HOM05D000231 ORTHO05D000132 5.3e-06 55.5 88 36.4
CDE05G1968 Ceratophyllum demersum HOM05D000231 ORTHO05D000132 5.3e-06 55.5 95 33.7
SalBow7G0486 Salvia bowleyana HOM05D000231 ORTHO05D000132 5.3e-06 55.5 136 31.6
PGSC0003DMG400015088 Solanum tuberosum HOM05D000231 ORTHO05D000132 5.3e-06 55.5 145 31.0
arahy.Tifrunner.gnm1.ann1.E07XC4 Arachis hypogaea HOM05D000231 ORTHO05D000132 6.9e-06 55.1 84 36.9
COL.COLO4_31634 Corchorus olitorius HOM05D000231 ORTHO05D000132 6.9e-06 55.1 90 32.2
ECA248G0693 Erigeron canadensis HOM05D000231 ORTHO05D000132 6.9e-06 55.1 152 32.2
MBI04_g30224_MAGBIO Magnolia biondii HOM05D000231 ORTHO05D000132 6.9e-06 55.1 92 33.7
vmacro15856 Vaccinium macrocarpon HOM05D000231 ORTHO05D000132 6.9e-06 55.1 93 40.9
VMungo1127G1725 Vigna mungo HOM05D000231 ORTHO05D000132 6.9e-06 55.1 91 37.4
arahy.Tifrunner.gnm1.ann1.V2AQ6U Arachis hypogaea HOM05D000231 ORTHO05D000132 9.0e-06 54.7 84 36.9
Gohir.D06G127200 Gossypium hirsutum HOM05D000231 ORTHO05D000132 9.0e-06 54.7 130 30.0
Gorai.010G148600 Gossypium raimondii HOM05D000231 ORTHO05D000132 9.0e-06 54.7 130 30.0
Nn5g30399 Nelumbo nucifera HOM05D000231 ORTHO05D000132 9.0e-06 54.7 163 26.4
Nitab4.5_0000649g0180 Nicotiana tabacum HOM05D000231 ORTHO05D000132 9.0e-06 54.7 118 32.2
Oeu052548.1 Olea europaea HOM05D000231 ORTHO05D000132 9.0e-06 54.7 141 31.9


User provided reference genes

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