Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu019367.1 Olea europaea HOM05D004171 ORTHO05D004983 8.8e-110 400.2 189 100.0
Oeu006766.1 Olea europaea HOM05D004171 ORTHO05D004983 8.3e-76 287.3 153 89.5
Nitab4.5_0000297g0160 Nicotiana tabacum HOM05D004171 ORTHO05D004983 3.6e-71 271.9 156 82.7
Nitab4.5_0009110g0010 Nicotiana tabacum HOM05D004171 ORTHO05D004983 5.2e-70 268.1 156 81.4
Peaxi162Scf01216g00047 Petunia axillaris HOM05D004171 ORTHO05D004983 1.2e-69 266.9 153 81.0
Solyc07g063620.3 Solanum lycopersicum HOM05D004171 ORTHO05D004983 2.4e-67 259.2 158 77.8
Sopen07g031800 Solanum pennellii HOM05D004171 ORTHO05D004983 2.4e-67 259.2 158 77.8
MSTRG.12927 Avicennia marina HOM05D004171 ORTHO05D004983 3.2e-67 258.8 153 79.1
Dinv22359 Davidia involucrata HOM05D004171 ORTHO05D004983 4.1e-67 258.5 149 82.6
PGSC0003DMG400019283 Solanum tuberosum HOM05D004171 ORTHO05D004983 4.1e-67 258.5 158 78.5
Actinidia09971 Actinidia chinensis HOM05D004171 ORTHO05D004983 2.0e-66 256.1 153 78.4
TAR629G3225 Trochodendron aralioides HOM05D004171 ORTHO05D004983 1.1e-64 250.4 154 78.6
CSS0009250 Camellia sinensis var. sinensis HOM05D004171 ORTHO05D004983 1.5e-64 250.0 155 77.4
MSTRG.14383 Avicennia marina HOM05D004171 ORTHO05D004983 1.9e-64 249.6 153 77.1
Cc05_g12750 Coffea canephora HOM05D004171 ORTHO05D004983 5.6e-64 248.1 154 75.3
Actinidia05147 Actinidia chinensis HOM05D004171 ORTHO05D004983 7.3e-64 247.7 153 75.8
TAR627G1073 Trochodendron aralioides HOM05D004171 ORTHO05D004983 9.5e-64 247.3 154 77.9
Atru.chr2.2929 Acer truncatum HOM05D004171 ORTHO05D004983 1.6e-63 246.5 158 75.3
Ciclev10009152m.g Citrus clementina HOM05D004171 ORTHO05D004983 1.5e-61 240.0 157 72.0
arahy.Tifrunner.gnm1.ann1.SXKR4Z Arachis hypogaea HOM05D004171 ORTHO05D004983 3.4e-61 238.8 153 70.6
CAN.G162.108 Capsicum annuum HOM05D004171 ORTHO05D004983 3.4e-61 238.8 158 74.1
Duzib213G0518 Durio zibethinus HOM05D004171 ORTHO05D004983 3.4e-61 238.8 156 72.4
HanXRQChr02g0031371 Helianthus annuus HOM05D004171 ORTHO05D004983 3.4e-61 238.8 153 71.9
Lsat_1_v5_gn_7_105981 Lactuca sativa HOM05D004171 ORTHO05D004983 3.4e-61 238.8 159 69.2
Sabra11G0111100 Salix brachista HOM05D004171 ORTHO05D004983 3.4e-61 238.8 154 72.1
Ca_22993_v3 Cicer arietinum L. HOM05D004171 ORTHO05D004983 4.4e-61 238.4 159 70.4
Gohir.D13G148000 Gossypium hirsutum HOM05D004171 ORTHO05D004983 7.5e-61 237.7 153 75.2
Gorai.013G165800 Gossypium raimondii HOM05D004171 ORTHO05D004983 9.8e-61 237.3 153 74.5
Potri.011G126300 Populus trichocarpa HOM05D004171 ORTHO05D004983 9.8e-61 237.3 154 72.1
Rhsim06G0192400 Rhododendron simsii HOM05D004171 ORTHO05D004983 1.7e-60 236.5 152 73.7
Gohir.A13G143300 Gossypium hirsutum HOM05D004171 ORTHO05D004983 6.4e-60 234.6 156 71.8
Aqoxy1G02716 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 1.1e-59 233.8 159 71.1
Migut.H01900 Erythranthe guttata HOM05D004171 ORTHO05D004983 1.9e-59 233.0 157 72.0
Nn1g06780 Nelumbo nucifera HOM05D004171 ORTHO05D004983 1.9e-59 233.0 154 73.4
SGA_v2.0_scaffold9G04958 Striga asiatica HOM05D004171 ORTHO05D004983 1.9e-59 233.0 153 71.2
Cfa020499 Carpinus fangiana HOM05D004171 ORTHO05D004983 2.4e-59 232.6 155 71.0
Haze_09543 Corylus avellana HOM05D004171 ORTHO05D004983 7.0e-59 231.1 156 70.5
COL.COLO4_09488 Corchorus olitorius HOM05D004171 ORTHO05D004983 1.2e-58 230.3 156 70.5
Glyma.12G134300 Glycine max HOM05D004171 ORTHO05D004983 1.2e-58 230.3 161 67.7
Gohir.A04G025600 Gossypium hirsutum HOM05D004171 ORTHO05D004983 1.2e-58 230.3 153 71.9
Duzib268G0239 Durio zibethinus HOM05D004171 ORTHO05D004983 2.1e-58 229.6 155 71.6
Gohir.D05G362300 Gossypium hirsutum HOM05D004171 ORTHO05D004983 2.1e-58 229.6 153 71.9
Gorai.009G430400 Gossypium raimondii HOM05D004171 ORTHO05D004983 2.7e-58 229.2 153 71.9
Lj3g0003583 Lotus japonicus HOM05D004171 ORTHO05D004983 4.6e-58 228.4 153 70.6
SalBow7G4117 Salvia bowleyana HOM05D004171 ORTHO05D004983 4.6e-58 228.4 152 73.7
Manes.03G117000 Manihot esculenta HOM05D004171 ORTHO05D004983 6.0e-58 228.0 159 68.6
Manes.15G082500 Manihot esculenta HOM05D004171 ORTHO05D004983 6.0e-58 228.0 160 67.5
Dinv08350 Davidia involucrata HOM05D004171 ORTHO05D004983 1.0e-57 227.3 122 87.7
Hma1.2p1_1176F.1_g264170 Hydrangea macrophylla HOM05D004171 ORTHO05D004983 1.0e-57 227.3 154 72.1
CiPaw.11G177500 Carya illinoinensis HOM05D004171 ORTHO05D004983 1.3e-57 226.9 155 68.4
Cpa.g.sc12.36 Carica papaya HOM05D004171 ORTHO05D004983 3.0e-57 225.7 153 70.6
Eucgr.F01074 Eucalyptus grandis HOM05D004171 ORTHO05D004983 3.0e-57 225.7 153 72.5
Lj1A854T34 Lonicera japonica HOM05D004171 ORTHO05D004983 3.0e-57 225.7 153 70.6
FAN11G0158 Fragaria x ananassa HOM05D004171 ORTHO05D004983 5.1e-57 224.9 160 67.5
FAN16G3093 Fragaria x ananassa HOM05D004171 ORTHO05D004983 5.1e-57 224.9 160 67.5
AUR62015590 Chenopodium quinoa HOM05D004171 ORTHO05D004983 8.6e-57 224.2 153 70.6
Thecc.07G070400 Theobroma cacao HOM05D004171 ORTHO05D004983 1.1e-56 223.8 160 67.5
Ah.04g165380 Amaranthus hybridus HOM05D004171 ORTHO05D004983 1.5e-56 223.4 158 67.7
Prupe.4G191500 Prunus persica HOM05D004171 ORTHO05D004983 1.5e-56 223.4 156 70.5
MBI02_g13230_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 3.3e-56 222.2 156 68.6
ClCG11G018550 Citrullus lanatus HOM05D004171 ORTHO05D004983 5.6e-56 221.5 156 69.2
Duzib170G1088 Durio zibethinus HOM05D004171 ORTHO05D004983 5.6e-56 221.5 158 69.0
CSS0026220 Camellia sinensis var. sinensis HOM05D004171 ORTHO05D004983 7.3e-56 221.1 153 69.3
MD11G1235500 Malus domestica HOM05D004171 ORTHO05D004983 7.3e-56 221.1 156 69.2
AUR62029303 Chenopodium quinoa HOM05D004171 ORTHO05D004983 9.5e-56 220.7 155 68.4
FAN25G0362 Fragaria x ananassa HOM05D004171 ORTHO05D004983 9.5e-56 220.7 160 65.6
MD03G1217700 Malus domestica HOM05D004171 ORTHO05D004983 9.5e-56 220.7 156 69.2
Medtr8g464760 Medicago truncatula HOM05D004171 ORTHO05D004983 9.5e-56 220.7 154 67.5
Sed0025378 Sechium edule HOM05D004171 ORTHO05D004983 9.5e-56 220.7 154 67.5
PSO675G0635 Papaver somniferum HOM05D004171 ORTHO05D004983 2.1e-55 219.5 156 67.3
FvH4_3g21110 Fragaria vesca HOM05D004171 ORTHO05D004983 2.8e-55 219.2 160 65.6
PGR083G0998 Punica granatum HOM05D004171 ORTHO05D004983 3.6e-55 218.8 153 70.6
RcHm_v2.0_Chr5g0036121 Rosa chinensis HOM05D004171 ORTHO05D004983 4.7e-55 218.4 160 66.9
Lalb_Chr19g0134521 Lupinus albus HOM05D004171 ORTHO05D004983 6.2e-55 218.0 155 63.2
Phvul.011G138400 Phaseolus vulgaris HOM05D004171 ORTHO05D004983 6.2e-55 218.0 157 66.2
Hund23371 Selenicereus undatus HOM05D004171 ORTHO05D004983 8.1e-55 217.6 157 67.5
CiPaw.12G123300 Carya illinoinensis HOM05D004171 ORTHO05D004983 1.4e-54 216.9 158 67.7
QL08p017518 Quercus lobata HOM05D004171 ORTHO05D004983 1.4e-54 216.9 160 67.5
MBI18_g27681_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 1.8e-54 216.5 151 66.2
PSO541G5656 Papaver somniferum HOM05D004171 ORTHO05D004983 2.3e-54 216.1 156 66.7
MELO3C018184.2 Cucumis melo HOM05D004171 ORTHO05D004983 5.2e-54 214.9 158 67.1
EL10Ac4g08047 Beta vulgaris HOM05D004171 ORTHO05D004983 6.8e-54 214.5 153 68.0
MBI18_g19831_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 6.8e-54 214.5 153 64.1
Psat4g140880 Pisum sativum HOM05D004171 ORTHO05D004983 1.5e-53 213.4 153 66.0
unitig_699.g19211 Utricularia gibba HOM05D004171 ORTHO05D004983 1.5e-53 213.4 153 68.6
vmacro11810 Vaccinium macrocarpon HOM05D004171 ORTHO05D004983 1.5e-53 213.4 151 68.2
Nn1g03875 Nelumbo nucifera HOM05D004171 ORTHO05D004983 2.0e-53 213.0 155 67.1
Glyma.12G218800 Glycine max HOM05D004171 ORTHO05D004983 4.4e-53 211.8 157 64.3
Sed0003677 Sechium edule HOM05D004171 ORTHO05D004983 4.4e-53 211.8 153 65.4
CsaV3_3G044320 Cucumis sativus L. HOM05D004171 ORTHO05D004983 5.8e-53 211.5 158 65.8
TPR.G25226 Trifolium pratense HOM05D004171 ORTHO05D004983 7.5e-53 211.1 155 64.5
DCAR_009989 Daucus carota HOM05D004171 ORTHO05D004983 9.9e-53 210.7 117 82.9
ECA236G3492 Erigeron canadensis HOM05D004171 ORTHO05D004983 9.9e-53 210.7 153 66.0
VMungo1127G0586 Vigna mungo HOM05D004171 ORTHO05D004983 2.9e-52 209.1 157 63.7
Lalb_Chr01g0017051 Lupinus albus HOM05D004171 ORTHO05D004983 6.4e-52 208.0 152 63.8
TWI38G2120 Tripterygium wilfordii HOM05D004171 ORTHO05D004983 1.1e-51 207.2 155 64.5
arahy.Tifrunner.gnm1.ann1.EUN1K4 Arachis hypogaea HOM05D004171 ORTHO05D004983 2.4e-51 206.1 116 77.6
THA.LOC104799905 Tarenaya hassleriana HOM05D004171 ORTHO05D004983 2.1e-50 203.0 163 58.9
VMungo1080G1500 Vigna mungo HOM05D004171 ORTHO05D004983 2.7e-50 202.6 158 62.0
GSVIVG01014444001 Vitis vinifera HOM05D004171 ORTHO05D004983 2.7e-50 202.6 154 63.6
Eucgr.F03360 Eucalyptus grandis HOM05D004171 ORTHO05D004983 4.6e-50 201.8 119 79.8
Sp7g25280 Schrenkiella parvula HOM05D004171 ORTHO05D004983 4.6e-50 201.8 164 59.1
TWI39G0675 Tripterygium wilfordii HOM05D004171 ORTHO05D004983 1.0e-49 200.7 156 64.1
Thhalv10025946m.g Eutrema salsugineum HOM05D004171 ORTHO05D004983 1.3e-49 200.3 163 58.9
AL7G25450 Arabidopsis lyrata HOM05D004171 ORTHO05D004983 1.7e-49 199.9 162 58.6
PGR031G0147 Punica granatum HOM05D004171 ORTHO05D004983 1.7e-49 199.9 159 62.9
THA.LOC104813397 Tarenaya hassleriana HOM05D004171 ORTHO05D004983 2.3e-49 199.5 168 56.5
CARHR235000 Cardamine hirsuta HOM05D004171 ORTHO05D004983 3.0e-49 199.1 162 59.3
AT4G27350 Arabidopsis thaliana HOM05D004171 ORTHO05D004983 3.9e-49 198.7 162 57.4
arahy.Tifrunner.gnm1.ann1.H2QIWP Arachis hypogaea HOM05D004171 ORTHO05D004983 3.9e-49 198.7 147 63.3
arahy.Tifrunner.gnm1.ann1.UD3S3B Arachis hypogaea HOM05D004171 ORTHO05D004983 3.9e-49 198.7 147 63.3
CDE02G1151 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 1.1e-48 197.2 154 60.4
BcaNung03036 Brassica carinata HOM05D004171 ORTHO05D004983 4.3e-48 195.3 166 56.0
BcaNung05201 Brassica carinata HOM05D004171 ORTHO05D004983 4.3e-48 195.3 166 56.0
BcaNung05200 Brassica carinata HOM05D004171 ORTHO05D004983 5.6e-48 194.9 165 56.4
Aa31LG3G10200 Aethionema arabicum HOM05D004171 ORTHO05D004983 2.1e-47 193.0 163 57.7
Carub.0007s1352 Capsella rubella HOM05D004171 ORTHO05D004983 2.1e-47 193.0 162 57.4
BcaB05g22115 Brassica carinata HOM05D004171 ORTHO05D004983 3.6e-47 192.2 164 57.9
AT5G54240 Arabidopsis thaliana HOM05D004171 ORTHO05D004983 4.7e-47 191.8 166 57.2
BcaB08g35778 Brassica carinata HOM05D004171 ORTHO05D004983 6.2e-47 191.4 163 57.7
A10p11530 Brassica napus HOM05D004171 ORTHO05D004983 6.2e-47 191.4 163 57.7
BraA10t43247Z Brassica rapa HOM05D004171 ORTHO05D004983 6.2e-47 191.4 163 57.7
HPP92_012360 Vanilla planifolia HOM05D004171 ORTHO05D004983 8.1e-47 191.0 155 56.8
BcaC09g50581 Brassica carinata HOM05D004171 ORTHO05D004983 1.1e-46 190.7 164 56.1
BcaC09g50583 Brassica carinata HOM05D002586 ORTHO05D007009 1.1e-46 190.7 164 56.1
C01p23480 Brassica napus HOM05D004171 ORTHO05D004983 1.1e-46 190.7 164 56.1
BolC1t02294H Brassica oleracea HOM05D004171 ORTHO05D004983 1.1e-46 190.7 164 56.1
Thhalv10014333m.g Eutrema salsugineum HOM05D004171 ORTHO05D004983 1.1e-46 190.7 163 57.1
Sc16g0006730 Simmondsia chinensis HOM05D004171 ORTHO05D004983 1.1e-46 190.7 153 58.8
C09p44520 Brassica napus HOM05D004171 ORTHO05D004983 1.4e-46 190.3 163 57.1
CARHR267500 Cardamine hirsuta HOM05D004171 ORTHO05D004983 1.4e-46 190.3 165 58.8
BcaC04g20360 Brassica carinata HOM05D004171 ORTHO05D004983 2.4e-46 189.5 164 57.9
BolC9t57324H Brassica oleracea HOM05D004171 ORTHO05D004983 2.4e-46 189.5 164 57.9
ATR0693G292 Amborella trichopoda HOM05D004171 ORTHO05D004983 3.1e-46 189.1 160 57.5
AL8G29560 Arabidopsis lyrata HOM05D004171 ORTHO05D004983 4.0e-46 188.7 169 56.8
BraA02t06113Z Brassica rapa HOM05D004171 ORTHO05D004983 5.2e-46 188.3 164 56.1
Sp6g16280 Schrenkiella parvula HOM05D004171 ORTHO05D004983 5.2e-46 188.3 163 56.4
A01p18530 Brassica napus HOM05D004171 ORTHO05D004983 1.2e-45 187.2 165 55.2
A02p10500 Brassica napus HOM05D004171 ORTHO05D004983 1.2e-45 187.2 164 56.1
BraA01t01802Z Brassica rapa HOM05D004171 ORTHO05D004983 1.2e-45 187.2 165 55.2
Aa31LG5G10160 Aethionema arabicum HOM05D002586 ORTHO05D007009 2.0e-45 186.4 171 53.2
CANSAT11G0840 Cannabis sativa HOM05D004171 ORTHO05D004983 2.6e-45 186.0 157 63.7
Carub.0008s1458 Capsella rubella HOM05D004171 ORTHO05D004983 4.4e-45 185.3 175 53.1
CDE01G0586 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 7.6e-45 184.5 151 58.9
DCAR_008697 Daucus carota HOM05D004171 ORTHO05D004983 8.4e-44 181.0 142 64.1
FAN21G0927 Fragaria x ananassa HOM05D004171 ORTHO05D004983 1.9e-43 179.9 124 70.2
Gorai.004G029100 Gossypium raimondii HOM05D004171 ORTHO05D004983 4.2e-43 178.7 153 59.5
Gohir.A08G020900 Gossypium hirsutum HOM05D004171 ORTHO05D004983 5.4e-43 178.3 153 58.8
Gohir.D08G031500 Gossypium hirsutum HOM05D004171 ORTHO05D004983 1.2e-42 177.2 153 59.5
Zm00001eb324170 Zea mays HOM05D004171 ORTHO05D004983 6.0e-42 174.9 153 54.9
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 1.9e-40 169.9 142 54.2
Os07g0559400 Oryza sativa ssp. japonica HOM05D004171 ORTHO05D004983 2.8e-39 166.0 192 46.4
SEGI_27365 Sequoiadendron giganteum HOM05D004171 ORTHO05D004983 1.1e-38 164.1 150 50.0
C02p17300 Brassica napus HOM05D004171 ORTHO05D004983 6.9e-38 161.4 137 59.1
BolC2t07830H Brassica oleracea HOM05D004171 ORTHO05D004983 9.0e-38 161.0 136 60.3
BolC2t07836H Brassica oleracea HOM05D004171 ORTHO05D004983 9.0e-38 161.0 136 60.3
Mapoly0102s0009 Marchantia polymorpha HOM05D004171 ORTHO05D004983 5.1e-33 145.2 119 52.9
SMO116G0055 Selaginella moellendorffii HOM05D004171 ORTHO05D004983 9.6e-32 141.0 117 51.3
CAN.G847.1 Capsicum annuum HOM05D004171 ORTHO05D004983 2.2e-28 129.8 80 77.5
Pp3c3_11900 Physcomitrium patens HOM05D004171 ORTHO05D004983 8.4e-28 127.9 157 40.8
CBR_g24077 Chara braunii HOM05D004171 ORTHO05D004983 1.4e-27 127.1 119 48.7
CDE12G0832 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 9.3e-27 124.4 109 55.0
BcaNung05202 Brassica carinata HOM05D004171 ORTHO05D004983 1.8e-25 120.2 113 51.3
Potri.001G408001 Populus trichocarpa HOM05D004171 ORTHO05D004983 3.9e-25 119.0 67 77.6
CBR_g54085 Chara braunii HOM05D000019 ORTHO05D000002 2.5e-24 116.3 121 43.0
CAN.G187.6 Capsicum annuum HOM05D004171 ORTHO05D004983 1.2e-21 107.5 65 75.4
AagrBONN_evm.TU.Sc2ySwM_228.913 Anthoceros agrestis HOM05D004171 ORTHO05D004983 1.1e-19 100.9 83 51.8
CDE05G1305 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 3.0e-17 92.8 145 39.3
MSTRG.26576 Avicennia marina HOM05D004171 ORTHO05D088140 9.7e-08 61.2 46 65.2


User provided reference genes

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