Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu019294.1 Olea europaea HOM05D000599 ORTHO05D006883 3.7e-28 127.5 63 100.0
Oeu025350.3 Olea europaea HOM05D000599 ORTHO05D006883 1.0e-14 82.8 43 90.7
TWI38G1662 Tripterygium wilfordii HOM05D000599 ORTHO05D006883 8.5e-09 63.2 35 82.9
CSS0008026 Camellia sinensis var. sinensis HOM05D000599 ORTHO05D006883 1.4e-08 62.4 35 85.7
Ca_04028_v3 Cicer arietinum L. HOM05D000599 ORTHO05D006883 1.9e-08 62.0 35 80.0
Migut.M00767 Erythranthe guttata HOM05D000599 ORTHO05D006883 1.9e-08 62.0 35 82.9
Lj3g0008187 Lotus japonicus HOM05D000599 ORTHO05D006883 2.5e-08 61.6 35 74.3
Medtr2g078520 Medicago truncatula HOM05D000599 ORTHO05D006883 2.5e-08 61.6 35 77.1
SGA_v2.0_scaffold73G24221 Striga asiatica HOM05D000599 ORTHO05D006883 2.5e-08 61.6 35 82.9
arahy.Tifrunner.gnm1.ann1.10FGX8 Arachis hypogaea HOM05D000599 ORTHO05D006883 3.2e-08 61.2 35 80.0
arahy.Tifrunner.gnm1.ann1.PD8C8E Arachis hypogaea HOM05D000599 ORTHO05D006883 3.2e-08 61.2 35 80.0
ECA234G4269 Erigeron canadensis HOM05D001613 ORTHO05D006883 3.2e-08 61.2 35 77.1
Sabra16G0245600 Salix brachista HOM05D000599 ORTHO05D006883 3.2e-08 61.2 35 82.9
Cfa020625 Carpinus fangiana HOM05D000599 ORTHO05D006883 4.2e-08 60.8 35 82.9
Haze_09378 Corylus avellana HOM05D000599 ORTHO05D006883 4.2e-08 60.8 35 82.9
QL08p023388 Quercus lobata HOM05D000599 ORTHO05D006883 4.2e-08 60.8 35 80.0
Sc16g0007340 Simmondsia chinensis HOM05D000599 ORTHO05D006883 4.2e-08 60.8 35 77.1
CSS0043173 Camellia sinensis var. sinensis HOM05D000599 ORTHO05D006883 5.5e-08 60.5 35 82.9
MBI06_g45594_MAGBIO Magnolia biondii HOM05D000599 ORTHO05D006883 5.5e-08 60.5 35 77.1
RcHm_v2.0_Chr5g0032001 Rosa chinensis HOM05D000599 ORTHO05D006883 5.5e-08 60.5 35 82.9
GSVIVG01014259001 Vitis vinifera HOM05D000599 ORTHO05D006883 5.5e-08 60.5 35 82.9
ClCG05G009200 Citrullus lanatus HOM05D000599 ORTHO05D006883 7.2e-08 60.1 35 80.0
CsaV3_3G019590 Cucumis sativus L. HOM05D000599 ORTHO05D006883 7.2e-08 60.1 35 80.0
HanXRQChr10g0302461 Helianthus annuus HOM05D000599 ORTHO05D006883 7.2e-08 60.1 35 77.1
TPR.G22064 Trifolium pratense HOM05D000599 ORTHO05D006883 7.2e-08 60.1 35 74.3
Potri.001G373200 Populus trichocarpa HOM05D000599 ORTHO05D006883 9.4e-08 59.7 35 80.0
RcHm_v2.0_Chr5g0031931 Rosa chinensis HOM05D000599 ORTHO05D006883 9.4e-08 59.7 35 82.9
vmacro11900 Vaccinium macrocarpon HOM05D000599 ORTHO05D006883 9.4e-08 59.7 35 80.0
FAN11G3855 Fragaria x ananassa HOM05D000599 ORTHO05D006883 1.2e-07 59.3 35 80.0
FAN16G1937 Fragaria x ananassa HOM05D000599 ORTHO05D006883 1.2e-07 59.3 35 80.0
FAN21G2449 Fragaria x ananassa HOM05D000599 ORTHO05D006883 1.2e-07 59.3 35 80.0
Os01g0753100 Oryza sativa ssp. japonica HOM05D000599 ORTHO05D006883 1.2e-07 59.3 35 77.1
Psat5g241360 Pisum sativum HOM05D000599 ORTHO05D006883 1.2e-07 59.3 35 71.4
Aqoxy4G00576 Aquilegia oxysepala HOM05D000599 ORTHO05D006883 1.6e-07 58.9 35 74.3
AUR62019501 Chenopodium quinoa HOM05D000223 ORTHO05D000736 1.6e-07 58.9 35 74.3
AUR62019503 Chenopodium quinoa HOM05D000599 ORTHO05D006883 1.6e-07 58.9 35 74.3
Glyma.12G227400 Glycine max HOM05D000599 ORTHO05D006883 1.6e-07 58.9 35 77.1
Lj1A836G33 Lonicera japonica HOM05D000599 ORTHO05D006883 1.6e-07 58.9 35 80.0
Sed0014270 Sechium edule HOM05D000599 ORTHO05D006883 1.6e-07 58.9 35 77.1
Duzib213G1012 Durio zibethinus HOM05D000599 ORTHO05D006883 2.1e-07 58.5 35 80.0
HPP92_021507 Vanilla planifolia HOM05D000599 ORTHO05D006883 2.1e-07 58.5 35 71.4
Atru.chr2.2379 Acer truncatum HOM05D000599 ORTHO05D006883 2.7e-07 58.2 35 77.1
Manes.12G158400 Manihot esculenta HOM05D000599 ORTHO05D006883 2.7e-07 58.2 35 74.3
AUR62036135 Chenopodium quinoa HOM05D000599 ORTHO05D006883 3.6e-07 57.8 35 71.4
Dinv20217 Davidia involucrata HOM05D000599 ORTHO05D006883 3.6e-07 57.8 35 80.0
SalBow7G1016 Salvia bowleyana HOM05D000599 ORTHO05D006883 3.6e-07 57.8 35 68.6
CiPaw.12G116700 Carya illinoinensis HOM05D000599 ORTHO05D006883 4.6e-07 57.4 35 74.3
Ciclev10008721m.g Citrus clementina HOM05D000599 ORTHO05D006883 4.6e-07 57.4 35 77.1
Lalb_Chr25g0286171 Lupinus albus HOM05D000599 ORTHO05D006883 4.6e-07 57.4 35 71.4
MD03G1236200 Malus domestica HOM05D000599 ORTHO05D006883 4.6e-07 57.4 35 77.1
TAR627G0901 Trochodendron aralioides HOM05D000599 ORTHO05D006883 4.6e-07 57.4 35 74.3
Phvul.005G069200 Phaseolus vulgaris HOM05D000599 ORTHO05D006883 6.1e-07 57.0 35 71.4
Cpa.g.sc80.13 Carica papaya HOM05D000599 ORTHO05D006883 7.9e-07 56.6 35 74.3
Ah.04g164460 Amaranthus hybridus HOM05D000599 ORTHO05D006883 1.0e-06 56.2 36 69.4
CANSAT35G1865 Cannabis sativa HOM05D000599 ORTHO05D006883 1.0e-06 56.2 35 77.1
Glyma.13G272900 Glycine max HOM05D000599 ORTHO05D006883 1.0e-06 56.2 35 71.4
CAN.G329.7 Capsicum annuum HOM05D000599 ORTHO05D006883 1.4e-06 55.8 35 68.6
Gohir.A01G060100 Gossypium hirsutum HOM05D000599 ORTHO05D006883 1.4e-06 55.8 35 77.1
Gohir.D01G046600 Gossypium hirsutum HOM05D000599 ORTHO05D006883 1.4e-06 55.8 35 77.1
Gorai.002G066100 Gossypium raimondii HOM05D000599 ORTHO05D006883 1.4e-06 55.8 35 77.1
MD11G1257100 Malus domestica HOM05D000599 ORTHO05D006883 1.4e-06 55.8 35 74.3
Oeu007447.1 Olea europaea HOM05D008214 ORTHO05D006883 1.4e-06 55.8 33 75.8
Hund22810 Selenicereus undatus HOM05D000599 ORTHO05D006883 1.4e-06 55.8 35 68.6
PGSC0003DMG400015372 Solanum tuberosum HOM05D000599 ORTHO05D006883 1.4e-06 55.8 35 68.6
Thecc.07G100100 Theobroma cacao HOM05D000599 ORTHO05D006883 1.4e-06 55.8 35 77.1
EL10Ac4g08277 Beta vulgaris HOM05D000599 ORTHO05D006883 1.8e-06 55.5 35 71.4
Solyc12g014050.2 Solanum lycopersicum HOM05D000599 ORTHO05D006883 1.8e-06 55.5 35 68.6
VMungo1080G1405 Vigna mungo HOM05D000599 ORTHO05D006883 1.8e-06 55.5 35 68.6
BcaB06g29534 Brassica carinata HOM05D000599 ORTHO05D006883 2.3e-06 55.1 34 76.5
A05p34360 Brassica napus HOM05D000599 ORTHO05D006883 2.3e-06 55.1 34 76.5
C05p52130 Brassica napus HOM05D000599 ORTHO05D006883 2.3e-06 55.1 34 76.5
BolC5t33898H Brassica oleracea HOM05D000599 ORTHO05D006883 2.3e-06 55.1 34 76.5
BraA05t22256Z Brassica rapa HOM05D000599 ORTHO05D006883 2.3e-06 55.1 34 76.5
Nitab4.5_0000332g0200 Nicotiana tabacum HOM05D000599 ORTHO05D006883 2.3e-06 55.1 35 68.6
Nitab4.5_0003033g0020 Nicotiana tabacum HOM05D000599 ORTHO05D006883 2.3e-06 55.1 35 68.6
Peaxi162Scf00000g00284 Petunia axillaris HOM05D000599 ORTHO05D006883 2.3e-06 55.1 35 65.7
Prupe.4G173000 Prunus persica HOM05D000599 ORTHO05D006883 2.3e-06 55.1 35 77.1
PSO832G3682 Papaver somniferum HOM05D000599 ORTHO05D006883 3.0e-06 54.7 36 75.0
DCAR_019576 Daucus carota HOM05D000599 ORTHO05D006883 3.9e-06 54.3 35 71.4
Sopen12g005790 Solanum pennellii HOM05D000599 ORTHO05D006883 5.1e-06 53.9 35 65.7
Eucgr.F01180 Eucalyptus grandis HOM05D000599 ORTHO05D006883 6.7e-06 53.5 33 75.8
PGR083G0548 Punica granatum HOM05D000599 ORTHO05D006883 6.7e-06 53.5 35 71.4
Rhsim06G0203600 Rhododendron simsii HOM05D000599 ORTHO05D006883 6.7e-06 53.5 32 81.2
Thhalv10020985m.g Eutrema salsugineum HOM05D000599 ORTHO05D006883 8.8e-06 53.1 34 76.5
THA.LOC104810454 Tarenaya hassleriana HOM05D000599 ORTHO05D006883 8.8e-06 53.1 34 76.5


User provided reference genes

Program Settings