Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu019275.2 Olea europaea HOM05D004875 ORTHO05D005598 3.3e-164 581.6 295 100.0
CSS0009670 Camellia sinensis var. sinensis HOM05D004875 ORTHO05D005598 9.8e-116 420.6 266 81.2
Cc01_g14850 Coffea canephora HOM05D004875 ORTHO05D000053 2.8e-115 419.1 266 81.2
HanXRQChr08g0228771 Helianthus annuus HOM05D004875 ORTHO05D005598 4.9e-115 418.3 269 80.3
SGA_v2.0_scaffold146G36120 Striga asiatica HOM05D004875 ORTHO05D005598 4.9e-115 418.3 303 74.6
Actinidia32610 Actinidia chinensis HOM05D004875 ORTHO05D005598 6.3e-115 417.9 266 81.2
Lsat_1_v5_gn_9_14720 Lactuca sativa HOM05D004875 ORTHO05D005598 8.3e-115 417.5 275 78.9
SalBow2G1321 Salvia bowleyana HOM05D004875 ORTHO05D005598 1.1e-114 417.2 303 73.9
Nitab4.5_0000002g0030 Nicotiana tabacum HOM05D004875 ORTHO05D005598 7.0e-114 414.5 274 78.8
Lj1C127G1 Lonicera japonica HOM05D004875 ORTHO05D005598 9.2e-114 414.1 266 80.1
Cpa.g.sc2.355 Carica papaya HOM05D004875 ORTHO05D005598 3.5e-113 412.1 299 72.2
Rhsim13G0064100 Rhododendron simsii HOM05D004875 ORTHO05D005598 5.9e-113 411.4 273 78.8
Thecc.09G357800 Theobroma cacao HOM05D004875 ORTHO05D005598 5.9e-113 411.4 310 69.7
QL01p026245 Quercus lobata HOM05D004875 ORTHO05D005598 1.0e-112 410.6 266 78.2
GSVIVG01024634001 Vitis vinifera HOM05D004875 ORTHO05D005598 1.0e-112 410.6 266 78.9
Hma1.2p1_1692F.1_g297880 Hydrangea macrophylla HOM05D004875 ORTHO05D005598 1.7e-112 409.8 266 78.9
Actinidia23196 Actinidia chinensis HOM05D004875 ORTHO05D005598 5.0e-112 408.3 266 79.3
Prupe.6G048400 Prunus persica HOM05D004875 ORTHO05D005598 5.0e-112 408.3 266 77.1
MSTRG.12688 Avicennia marina HOM05D004875 ORTHO05D005598 8.6e-112 407.5 259 81.9
Manes.02G211800 Manihot esculenta HOM05D004875 ORTHO05D005598 8.6e-112 407.5 290 73.8
vmacro02918 Vaccinium macrocarpon HOM05D004875 ORTHO05D005598 1.9e-111 406.4 266 80.1
CiPaw.13G069200 Carya illinoinensis HOM05D004875 ORTHO05D005598 2.5e-111 406.0 266 77.8
Haze_24411 Corylus avellana HOM05D004875 ORTHO05D005598 4.3e-111 405.2 275 75.6
CSS0036828 Camellia sinensis var. sinensis HOM05D004875 ORTHO05D005598 5.6e-111 404.8 266 80.1
Migut.N00759 Erythranthe guttata HOM05D004875 ORTHO05D005598 5.6e-111 404.8 267 78.3
Potri.013G152800 Populus trichocarpa HOM05D004875 ORTHO05D005598 7.3e-111 404.4 266 77.4
COL.COLO4_11154 Corchorus olitorius HOM05D004875 ORTHO05D005598 1.2e-110 403.7 310 68.1
HanXRQChr13g0386431 Helianthus annuus HOM05D004875 ORTHO05D005598 1.2e-110 403.7 269 77.0
MD11G1058300 Malus domestica HOM05D004875 ORTHO05D005598 2.1e-110 402.9 275 75.3
Gohir.A05G109100 Gossypium hirsutum HOM05D004875 ORTHO05D005598 2.8e-110 402.5 310 68.1
Gohir.D05G109200 Gossypium hirsutum HOM05D004875 ORTHO05D005598 3.6e-110 402.1 309 68.3
Gorai.009G113500 Gossypium raimondii HOM05D004875 ORTHO05D005598 3.6e-110 402.1 309 68.3
TWI31G0826 Tripterygium wilfordii HOM05D004875 ORTHO05D005598 4.7e-110 401.7 266 75.6
Sopen09g013270 Solanum pennellii HOM05D004875 ORTHO05D005598 8.0e-110 401.0 299 71.2
TWI79G1304 Tripterygium wilfordii HOM05D004875 ORTHO05D005598 8.0e-110 401.0 266 75.6
MD03G1056500 Malus domestica HOM05D004875 ORTHO05D005598 1.0e-109 400.6 272 75.7
RcHm_v2.0_Chr5g0071641 Rosa chinensis HOM05D004875 ORTHO05D005598 1.4e-109 400.2 266 76.3
Solyc09g057910.3 Solanum lycopersicum HOM05D004875 ORTHO05D005598 1.4e-109 400.2 299 71.2
CANSAT54G1540 Cannabis sativa HOM05D004875 ORTHO05D005598 2.3e-109 399.4 266 75.6
Atru.chr3.4118 Acer truncatum HOM05D004875 ORTHO05D005598 3.1e-109 399.1 296 71.3
PGR102G0105 Punica granatum HOM05D004875 ORTHO05D005598 5.2e-109 398.3 275 73.1
THA.LOC104799387 Tarenaya hassleriana HOM05D004875 ORTHO05D005598 5.2e-109 398.3 302 70.5
CsaV3_6G015880 Cucumis sativus L. HOM05D004875 ORTHO05D005598 8.9e-109 397.5 266 74.8
Peaxi162Scf00055g01011 Petunia axillaris HOM05D004875 ORTHO05D005598 1.2e-108 397.1 266 77.8
ClCG02G019240 Citrullus lanatus HOM05D004875 ORTHO05D005598 2.0e-108 396.4 266 74.8
Nitab4.5_0005130g0040 Nicotiana tabacum HOM05D004875 ORTHO05D005598 2.6e-108 396.0 286 73.4
Sp6g20140 Schrenkiella parvula HOM05D004875 ORTHO05D005598 2.6e-108 396.0 302 69.9
FAN21G2306 Fragaria x ananassa HOM05D004875 ORTHO05D005598 3.4e-108 395.6 258 77.5
Lalb_Chr20g0114691 Lupinus albus HOM05D004875 ORTHO05D005598 3.4e-108 395.6 264 75.8
FvH4_3g39760 Fragaria vesca HOM05D004875 ORTHO05D005598 5.8e-108 394.8 265 75.5
FAN11G0831 Fragaria x ananassa HOM05D004875 ORTHO05D005598 5.8e-108 394.8 265 75.5
MELO3C025695.2 Cucumis melo HOM05D004875 ORTHO05D005598 7.5e-108 394.4 258 76.0
Ciclev10030286m.g Citrus clementina HOM05D004875 ORTHO05D005598 2.2e-107 392.9 266 75.9
ECA247G1423 Erigeron canadensis HOM05D004875 ORTHO05D005598 2.2e-107 392.9 269 76.2
FAN25G2145 Fragaria x ananassa HOM05D004875 ORTHO05D005598 2.2e-107 392.9 258 76.7
DCAR_018231 Daucus carota HOM05D004875 ORTHO05D005598 3.7e-107 392.1 266 76.3
BcaB08g36179 Brassica carinata HOM05D004875 ORTHO05D005598 4.9e-107 391.7 302 68.9
Aa31LG11G230 Aethionema arabicum HOM05D004875 ORTHO05D005598 6.4e-107 391.3 302 69.5
Sabra13G0122800 Salix brachista HOM05D004875 ORTHO05D005598 6.4e-107 391.3 339 63.4
FAN16G0994 Fragaria x ananassa HOM05D004875 ORTHO05D005598 8.3e-107 391.0 265 75.1
A10p15830 Brassica napus HOM05D004875 ORTHO05D005598 1.1e-106 390.6 302 68.9
BraA10t43642Z Brassica rapa HOM05D004875 ORTHO05D005598 1.1e-106 390.6 302 68.9
TPR.G25698 Trifolium pratense HOM05D004875 ORTHO05D005598 1.9e-106 389.8 266 74.1
Thhalv10012545m.g Eutrema salsugineum HOM05D004875 ORTHO05D005598 2.4e-106 389.4 302 68.9
AT5G58450 Arabidopsis thaliana HOM05D004875 ORTHO05D005598 3.2e-106 389.0 302 68.5
Aqoxy1G01286 Aquilegia oxysepala HOM05D004875 ORTHO05D005598 5.4e-106 388.3 299 68.9
C09p50320 Brassica napus HOM05D004875 ORTHO05D005598 5.4e-106 388.3 302 68.5
CARHR272270 Cardamine hirsuta HOM05D004875 ORTHO05D005598 9.2e-106 387.5 302 67.2
Cfa011778 Carpinus fangiana HOM05D004875 ORTHO05D005598 9.2e-106 387.5 266 75.2
Sed0004894 Sechium edule HOM05D004875 ORTHO05D005598 9.2e-106 387.5 266 74.8
BcaC04g19867 Brassica carinata HOM05D004875 ORTHO05D005598 1.2e-105 387.1 296 69.6
BolC9t57888H Brassica oleracea HOM05D004875 ORTHO05D005598 1.2e-105 387.1 296 69.6
VMungo0540G0701 Vigna mungo HOM05D004875 ORTHO05D005598 1.2e-105 387.1 266 74.1
AL8G34640 Arabidopsis lyrata HOM05D004875 ORTHO05D005598 3.5e-105 385.6 302 67.9
Carub.0008s1904 Capsella rubella HOM05D004875 ORTHO05D005598 6.0e-105 384.8 302 67.5
Phvul.006G074100 Phaseolus vulgaris HOM05D004875 ORTHO05D005598 2.3e-104 382.9 264 72.3
Psat5g154480 Pisum sativum HOM05D004875 ORTHO05D005598 2.3e-104 382.9 258 74.4
Glyma.18G057100 Glycine max HOM05D004875 ORTHO05D005598 6.6e-104 381.3 271 73.4
arahy.Tifrunner.gnm1.ann1.7Z8DLY Arachis hypogaea HOM05D004875 ORTHO05D005598 1.1e-103 380.6 266 72.6
arahy.Tifrunner.gnm1.ann1.LY55DJ Arachis hypogaea HOM05D004875 ORTHO05D005598 1.1e-103 380.6 266 72.6
AUR62009668 Chenopodium quinoa HOM05D004875 ORTHO05D005598 1.5e-103 380.2 274 70.8
Nn2g11010 Nelumbo nucifera HOM05D004875 ORTHO05D005598 1.5e-103 380.2 258 76.0
Glyma.11G163900 Glycine max HOM05D004875 ORTHO05D005598 1.9e-103 379.8 271 73.1
MBI15_g31180_MAGBIO Magnolia biondii HOM05D004875 ORTHO05D005598 4.3e-103 378.6 258 76.4
AUR62001870 Chenopodium quinoa HOM05D004875 ORTHO05D005598 5.6e-103 378.3 274 70.8
Eucgr.B04004 Eucalyptus grandis HOM05D004875 ORTHO05D005598 1.6e-102 376.7 266 72.6
Lj6g0003221 Lotus japonicus HOM05D004875 ORTHO05D005598 4.7e-102 375.2 266 72.2
TAR633G2039 Trochodendron aralioides HOM05D004875 ORTHO05D005598 4.7e-102 375.2 258 75.6
Ah.08g215110 Amaranthus hybridus HOM05D004875 ORTHO05D005598 8.0e-102 374.4 274 70.4
Medtr3g465700 Medicago truncatula HOM05D004875 ORTHO05D005598 1.8e-101 373.2 266 71.4
Sc12g0001960 Simmondsia chinensis HOM05D004875 ORTHO05D005598 1.8e-101 373.2 269 71.0
ATR0594G111 Amborella trichopoda HOM05D004875 ORTHO05D005598 3.4e-100 369.0 258 72.5
CDE07G1129 Ceratophyllum demersum HOM05D004875 ORTHO05D005598 3.7e-99 365.5 258 72.5
Hund05024 Selenicereus undatus HOM05D004875 ORTHO05D005598 8.3e-99 364.4 274 67.9
EL10Ac7g15921 Beta vulgaris HOM05D004875 ORTHO05D005598 1.4e-98 363.6 274 66.4
Os05g0345400 Oryza sativa ssp. japonica HOM05D004875 ORTHO05D005598 1.0e-96 357.5 264 71.6
HPP92_003240 Vanilla planifolia HOM05D004875 ORTHO05D005598 3.9e-96 355.5 265 70.9
Duzib168G1610 Durio zibethinus HOM05D004875 ORTHO05D005598 4.0e-93 345.5 310 61.0
Dinv09669 Davidia involucrata HOM05D004875 ORTHO05D005598 1.4e-82 310.5 166 91.6
AagrBONN_evm.TU.Sc2ySwM_228.3164 Anthoceros agrestis HOM05D004875 ORTHO05D005598 3.4e-68 262.7 260 53.5
Mapoly0170s0019 Marchantia polymorpha HOM05D004875 ORTHO05D005598 1.4e-66 257.3 260 53.1
SEGI_14366 Sequoiadendron giganteum HOM05D004875 ORTHO05D005598 3.5e-65 252.7 214 64.0
Pp3c18_5510 Physcomitrium patens HOM05D004875 ORTHO05D005598 9.6e-63 244.6 259 49.8
CDE04G2228 Ceratophyllum demersum HOM05D004875 ORTHO05D005598 2.8e-62 243.0 200 64.0
PSO765G0012 Papaver somniferum HOM05D004875 ORTHO05D005598 1.5e-55 220.7 250 46.8
PSO349G0337 Papaver somniferum HOM05D004875 ORTHO05D005598 1.9e-55 220.3 250 46.8
CAN.G3.44 Capsicum annuum HOM05D004875 ORTHO05D005598 5.5e-50 202.2 117 84.6
CBR_g50477 Chara braunii HOM05D004875 ORTHO05D005598 1.2e-44 184.5 254 38.2
PSO532G0016 Papaver somniferum HOM05D004875 ORTHO05D005598 6.1e-41 172.2 253 41.1
PSO541G1704 Papaver somniferum HOM05D004875 ORTHO05D005598 6.1e-41 172.2 253 41.1
PSO478G4214 Papaver somniferum HOM05D004875 ORTHO05D005598 7.4e-39 165.2 249 41.4
PSO541G6542 Papaver somniferum HOM05D004875 ORTHO05D005598 6.9e-37 158.7 253 42.3
C04p28250 Brassica napus HOM05D004875 ORTHO05D005598 1.7e-35 154.1 161 54.7
BolC4t24370H Brassica oleracea HOM05D004875 ORTHO05D005598 1.7e-35 154.1 161 54.7
SHI19217 Sapria himalayana HOM05D004875 ORTHO05D005598 3.2e-34 149.8 168 50.6
Zm00001eb286340 Zea mays HOM05D004875 ORTHO05D005598 3.5e-28 129.8 136 56.6
SHI19216 Sapria himalayana HOM05D004875 ORTHO05D005598 2.0e-23 114.0 72 75.0
MCO11G770 Micromonas commoda HOM05D004875 ORTHO05D005598 5.7e-23 112.5 236 29.2
BcaC02g10491 Brassica carinata HOM05D004875 ORTHO05D005598 2.8e-22 110.2 122 53.3
C01p15940 Brassica napus HOM05D004875 ORTHO05D005598 3.7e-22 109.8 97 62.9
Cre11.g475050 Chlamydomonas reinhardtii HOM05D004875 ORTHO05D005598 3.1e-21 106.7 279 33.0
unitig_0.g436 Utricularia gibba HOM05D004875 ORTHO05D005598 9.1e-21 105.1 269 34.2
BcaC07g37054 Brassica carinata HOM05D004875 ORTHO05D005598 4.5e-20 102.8 127 52.8
SMO117G0137 Selaginella moellendorffii HOM05D004875 ORTHO05D005598 1.7e-19 100.9 89 53.9
PRCOL_00002473 Prasinoderma coloniale HOM05D004875 ORTHO05D005598 1.6e-17 94.4 277 29.2
BolC8t47222H Brassica oleracea HOM05D004875 ORTHO05D005598 2.7e-17 93.6 81 58.0
PSO541G5558 Papaver somniferum HOM05D004875 ORTHO05D005598 1.8e-16 90.9 243 29.2
Oeu042861.1 Olea europaea HOM05D004875 ORTHO05D005598 4.0e-16 89.7 46 91.3
SHI19218 Sapria himalayana HOM05D004875 ORTHO05D005598 1.3e-14 84.7 51 74.5
SEGI_36322 Sequoiadendron giganteum HOM05D004875 ORTHO05D005598 3.5e-12 76.6 49 69.4
PGSC0003DMG400004010 Solanum tuberosum HOM05D004875 ORTHO05D005598 4.5e-12 76.3 77 54.5


User provided reference genes

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