Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu019207.1 Olea europaea HOM05D005967 ORTHO05D005174 2.7e-68 261.9 135 100.0
Oeu054156.1 Olea europaea HOM05D005967 ORTHO05D005174 4.9e-46 188.0 147 74.1
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 1.9e-18 96.3 131 49.6
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 4.3e-18 95.1 140 45.0
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 9.6e-18 94.0 146 43.8
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 1.3e-17 93.6 140 44.3
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 4.0e-16 88.6 109 56.9
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 4.0e-16 88.6 95 53.7
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 3.4e-15 85.5 97 55.7
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 1.3e-14 83.6 96 55.2
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 1.3e-14 83.6 99 54.5
Gorai.001G110300 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.7e-14 83.2 108 45.4
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.2e-14 82.8 109 46.8
CiPaw.14G068900 Carya illinoinensis HOM05D005967 ORTHO05D005174 3.8e-14 82.0 157 38.9
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 3.8e-14 82.0 109 45.9
Prupe.6G078900 Prunus persica HOM05D005967 ORTHO05D005174 8.4e-14 80.9 138 41.3
MD03G1095400 Malus domestica HOM05D005967 ORTHO05D005174 1.4e-13 80.1 115 50.4
Duzib168G1635 Durio zibethinus HOM05D005967 ORTHO05D005174 2.4e-13 79.3 99 51.5
Migut.N02671 Erythranthe guttata HOM05D005967 ORTHO05D005174 2.4e-13 79.3 141 42.6
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 3.2e-13 79.0 68 66.2
Sabra16G0144100 Salix brachista HOM05D005967 ORTHO05D005174 5.5e-13 78.2 102 51.0
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 5.5e-13 78.2 109 49.5
RcHm_v2.0_Chr5g0064301 Rosa chinensis HOM05D005967 ORTHO05D005174 7.1e-13 77.8 99 48.5
FAN11G1916 Fragaria x ananassa HOM05D005967 ORTHO05D005174 1.2e-12 77.0 103 45.6
FAN16G3022 Fragaria x ananassa HOM05D005967 ORTHO05D005174 1.6e-12 76.6 103 46.6
FAN21G3710 Fragaria x ananassa HOM05D005967 ORTHO05D005174 1.6e-12 76.6 103 46.6
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 1.6e-12 76.6 96 47.9
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 2.7e-12 75.9 77 59.7
FvH4_3g35950 Fragaria vesca HOM05D005967 ORTHO05D005174 4.6e-12 75.1 103 44.7
FAN25G3118 Fragaria x ananassa HOM05D005967 ORTHO05D005174 4.6e-12 75.1 103 46.6
Ciclev10029478m.g Citrus clementina HOM05D005967 ORTHO05D005174 6.0e-12 74.7 143 41.3
Thecc.09G322800 Theobroma cacao HOM05D005967 ORTHO05D005174 6.0e-12 74.7 79 55.7
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.0e-11 73.9 84 56.0
MD11G1110400 Malus domestica HOM05D005967 ORTHO05D005174 1.3e-11 73.6 115 47.8
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 1.8e-11 73.2 101 47.5
Dinv16991 Davidia involucrata HOM05D005967 ORTHO05D005174 1.8e-11 73.2 140 45.0
Dinv42940 Davidia involucrata HOM05D005967 ORTHO05D005174 1.8e-11 73.2 140 45.0
Dinv43160 Davidia involucrata HOM05D005967 ORTHO05D005174 1.8e-11 73.2 140 45.0
DCAR_005325 Daucus carota HOM05D005967 ORTHO05D005174 2.3e-11 72.8 94 52.1
Gohir.A03G037600 Gossypium hirsutum HOM05D005967 ORTHO05D005174 3.9e-11 72.0 121 44.6
TWI79G0544 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 3.9e-11 72.0 95 45.3
CsaV3_1G034090 Cucumis sativus L. HOM05D005967 ORTHO05D005174 8.7e-11 70.9 129 39.5
Gohir.D03G126300 Gossypium hirsutum HOM05D005967 ORTHO05D005174 8.7e-11 70.9 83 57.8
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 1.1e-10 70.5 101 49.5
Sed0015612 Sechium edule HOM05D005967 ORTHO05D005174 1.1e-10 70.5 131 41.2
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 1.9e-10 69.7 92 53.3
Peaxi162Scf00832g00006 Petunia axillaris HOM05D030065 ORTHO05D005174 1.9e-10 69.7 75 56.0
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 1.9e-10 69.7 78 52.6
Nn2g10378 Nelumbo nucifera HOM05D005967 ORTHO05D005174 2.5e-10 69.3 100 46.0
MELO3C020645.2 Cucumis melo HOM05D005967 ORTHO05D005174 5.6e-10 68.2 129 38.0
Dinv12413 Davidia involucrata HOM05D005967 ORTHO05D005174 7.4e-10 67.8 139 38.1
CANSAT54G2543 Cannabis sativa HOM05D005967 ORTHO05D005174 9.6e-10 67.4 73 53.4
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 4.8e-09 65.1 105 40.0
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 6.2e-09 64.7 114 39.5
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 6.2e-09 64.7 98 44.9
Solyc11g066000.1 Solanum lycopersicum HOM05D030065 ORTHO05D005174 8.2e-09 64.3 86 50.0
Atru.chr3.3892 Acer truncatum HOM05D005967 ORTHO05D005174 1.1e-08 63.9 95 49.5
ClCG03G001590 Citrullus lanatus HOM05D005967 ORTHO05D005174 1.1e-08 63.9 69 52.2
DCAR_005974 Daucus carota HOM05D005967 ORTHO05D005174 1.1e-08 63.9 92 48.9
Peaxi162Scf00679g00042 Petunia axillaris HOM05D005967 ORTHO05D014046 1.1e-08 63.9 81 48.1
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.4e-08 63.5 83 49.4
Sopen11g025730 Solanum pennellii HOM05D030065 ORTHO05D005174 1.4e-08 63.5 86 48.8
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 3.1e-08 62.4 93 44.1
Gohir.A01G222700 Gossypium hirsutum HOM05D005967 ORTHO05D005174 3.1e-08 62.4 77 50.6
CiPaw.09G192100 Carya illinoinensis HOM05D005967 ORTHO05D005174 5.3e-08 61.6 89 44.9
PGSC0003DMG400000470 Solanum tuberosum HOM05D030065 ORTHO05D005174 9.0e-08 60.8 86 47.7
Ca_28209_v3 Cicer arietinum L. HOM05D005967 ORTHO05D005174 1.2e-07 60.5 110 47.3
MBI05_g30241_MAGBIO Magnolia biondii HOM05D005967 ORTHO05D005174 1.2e-07 60.5 90 42.2
Potri.006G084700 Populus trichocarpa HOM05D005967 ORTHO05D005174 1.5e-07 60.1 89 49.4
Duzib093G0486 Durio zibethinus HOM05D005967 ORTHO05D005174 2.0e-07 59.7 94 42.6
Sabra06G0064300 Salix brachista HOM05D000729 ORTHO05D001063 2.6e-07 59.3 89 46.1
CSS0050430 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 4.5e-07 58.5 109 40.4
Glyma.15G038800 Glycine max HOM05D005967 ORTHO05D005174 5.8e-07 58.2 91 41.8
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 1.3e-06 57.0 106 34.9
TAR636G2062 Trochodendron aralioides HOM05D000645 ORTHO05D000494 2.2e-06 56.2 116 36.2
AL8G35800 Arabidopsis lyrata HOM05D012305 ORTHO05D014046 3.8e-06 55.5 76 46.1
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 4.9e-06 55.1 106 37.7
Actinidia23945 Actinidia chinensis HOM05D005967 ORTHO05D005174 6.5e-06 54.7 69 49.3
Hma1.2p1_1513F.1_g288050 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 6.5e-06 54.7 98 35.7
Sc01g0004310 Simmondsia chinensis HOM05D005967 ORTHO05D005174 6.5e-06 54.7 104 38.5
CARHR122020 Cardamine hirsuta HOM05D010012 ORTHO05D012171 8.4e-06 54.3 130 31.5


User provided reference genes

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