Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu019186.1 Olea europaea HOM05D004282 ORTHO05D006804 0.0e+00 1098.6 535 100.0
SGA_v2.0_scaffold173G39175 Striga asiatica HOM05D004282 ORTHO05D006804 4.5e-284 980.7 536 88.2
Migut.A00734 Erythranthe guttata HOM05D004282 ORTHO05D006804 1.3e-283 979.2 535 87.7
MSTRG.11981 Avicennia marina HOM05D004282 ORTHO05D006804 1.7e-283 978.8 535 88.2
Oeu009150.1 Olea europaea HOM05D004282 ORTHO05D006804 7.6e-276 953.4 539 87.0
PGSC0003DMG400012205 Solanum tuberosum HOM05D004282 ORTHO05D006804 4.3e-271 937.6 532 83.1
Sopen08g029450 Solanum pennellii HOM05D004282 ORTHO05D006804 1.6e-270 935.6 532 82.7
unitig_578.g16628 Utricularia gibba HOM05D004282 ORTHO05D006804 2.8e-270 934.9 535 83.6
Solyc08g081150.4 Solanum lycopersicum HOM05D004282 ORTHO05D006804 4.8e-270 934.1 532 82.7
Dinv37635 Davidia involucrata HOM05D004282 ORTHO05D006804 1.4e-269 932.6 535 82.6
CSS0007959 Camellia sinensis var. sinensis HOM05D004282 ORTHO05D006804 1.2e-268 929.5 535 82.4
CSS0014359 Camellia sinensis var. sinensis HOM05D004282 ORTHO05D006804 1.2e-268 929.5 535 82.4
HanXRQChr13g0394231 Helianthus annuus HOM05D004282 ORTHO05D006804 4.5e-268 927.5 536 82.3
Actinidia02002 Actinidia chinensis HOM05D004282 ORTHO05D006804 2.2e-267 925.2 535 81.7
Lsat_1_v5_gn_3_6581 Lactuca sativa HOM05D004282 ORTHO05D006804 1.1e-266 922.9 536 81.9
COL.COLO4_34472 Corchorus olitorius HOM05D004282 ORTHO05D006804 1.4e-266 922.5 535 81.1
Sed0021454 Sechium edule HOM05D004282 ORTHO05D006804 2.5e-266 921.8 535 80.7
TAR374G0019 Trochodendron aralioides HOM05D004282 ORTHO05D006804 2.5e-266 921.8 535 81.3
TAR375G0364 Trochodendron aralioides HOM05D004282 ORTHO05D006804 2.5e-266 921.8 535 81.5
CAN.G774.52 Capsicum annuum HOM05D004282 ORTHO05D006804 4.2e-266 921.0 528 82.4
Rhsim02G0231700 Rhododendron simsii HOM05D004282 ORTHO05D006804 7.1e-266 920.2 536 81.5
MELO3C005680.2 Cucumis melo HOM05D004282 ORTHO05D006804 3.5e-265 917.9 535 80.4
DCAR_006738 Daucus carota HOM05D004282 ORTHO05D006804 6.0e-265 917.1 535 81.5
DCAR_006739 Daucus carota HOM05D004282 ORTHO05D006804 6.0e-265 917.1 535 81.5
Lj8A221T67 Lonicera japonica HOM05D004282 ORTHO05D006804 7.9e-265 916.8 536 81.7
PGR042G2758 Punica granatum HOM05D004282 ORTHO05D006804 1.0e-264 916.4 535 80.6
Duzib068G0684 Durio zibethinus HOM05D004282 ORTHO05D006804 1.3e-264 916.0 535 80.7
Peaxi162Scf00119g00947 Petunia axillaris HOM05D004282 ORTHO05D006804 1.8e-264 915.6 531 81.9
CsaV3_5G002770 Cucumis sativus L. HOM05D004282 ORTHO05D006804 3.0e-264 914.8 535 80.0
ClCG01G002660 Citrullus lanatus HOM05D004282 ORTHO05D006804 6.7e-264 913.7 535 80.4
MD06G1084500 Malus domestica HOM05D004282 ORTHO05D006804 6.7e-264 913.7 535 80.2
Prupe.5G100800 Prunus persica HOM05D004282 ORTHO05D006804 6.7e-264 913.7 535 80.9
Lsat_1_v5_gn_6_6601 Lactuca sativa HOM05D004282 ORTHO05D006804 8.7e-264 913.3 536 81.3
Duzib084G1154 Durio zibethinus HOM05D004282 ORTHO05D006804 1.9e-263 912.1 535 80.6
Gohir.A03G016700 Gossypium hirsutum HOM05D004282 ORTHO05D006804 2.5e-263 911.8 535 80.4
Gorai.003G158400 Gossypium raimondii HOM05D004282 ORTHO05D006804 5.7e-263 910.6 535 80.4
Thecc.03G279500 Theobroma cacao HOM05D004282 ORTHO05D006804 5.7e-263 910.6 535 80.2
Nn6g33428 Nelumbo nucifera HOM05D004282 ORTHO05D006804 7.4e-263 910.2 535 80.9
Sc01g0009620 Simmondsia chinensis HOM05D004282 ORTHO05D006804 7.4e-263 910.2 535 80.7
Eucgr.E00626 Eucalyptus grandis HOM05D004282 ORTHO05D006804 9.6e-263 909.8 535 80.2
QL12p032840 Quercus lobata HOM05D004282 ORTHO05D006804 1.3e-262 909.4 534 80.0
CiPaw.11G134600 Carya illinoinensis HOM05D004282 ORTHO05D006804 1.6e-262 909.1 537 81.0
Cfa012224 Carpinus fangiana HOM05D004282 ORTHO05D006804 2.1e-262 908.7 537 80.1
Hma1.2p1_0209F.1_g088780 Hydrangea macrophylla HOM05D004282 ORTHO05D006804 4.8e-262 907.5 534 80.7
TWI81G0763 Tripterygium wilfordii HOM05D004282 ORTHO05D006804 4.8e-262 907.5 535 80.4
Gohir.D03G151200 Gossypium hirsutum HOM05D004282 ORTHO05D006804 8.2e-262 906.7 535 80.2
Manes.02G019600 Manihot esculenta HOM05D004282 ORTHO05D006804 1.1e-261 906.4 535 79.8
MD14G1105600 Malus domestica HOM05D004282 ORTHO05D006804 1.4e-261 906.0 535 79.6
Glyma.05G208400 Glycine max HOM05D004282 ORTHO05D006804 2.4e-261 905.2 535 79.6
HanXRQChr06g0165861 Helianthus annuus HOM05D004282 ORTHO05D006804 6.9e-261 903.7 531 80.4
Aqoxy2G03117 Aquilegia oxysepala HOM05D004282 ORTHO05D006804 1.5e-260 902.5 536 80.0
Gohir.D08G201400 Gossypium hirsutum HOM05D004282 ORTHO05D006804 1.5e-260 902.5 535 79.6
Aqoxy7G00313 Aquilegia oxysepala HOM05D004282 ORTHO05D006804 2.6e-260 901.7 535 79.1
Nitab4.5_0001615g0080 Nicotiana tabacum HOM05D004282 ORTHO05D006804 4.5e-260 901.0 553 78.5
Potri.003G128200 Populus trichocarpa HOM05D004282 ORTHO05D006804 5.9e-260 900.6 535 78.7
Nitab4.5_0000678g0110 Nicotiana tabacum HOM05D004282 ORTHO05D006804 1.7e-259 899.0 553 77.9
Ca_17527_v3 Cicer arietinum L. HOM05D004282 ORTHO05D006804 2.2e-259 898.7 535 78.7
Ciclev10019676m.g Citrus clementina HOM05D004282 ORTHO05D006804 2.2e-259 898.7 529 80.2
TPR.G12833 Trifolium pratense HOM05D004282 ORTHO05D006804 6.5e-259 897.1 535 78.9
Manes.08G013300 Manihot esculenta HOM05D004282 ORTHO05D006804 1.1e-258 896.3 529 80.0
Hund14799 Selenicereus undatus HOM05D004282 ORTHO05D006804 1.4e-258 896.0 540 78.7
VMungo0251G3615 Vigna mungo HOM05D004282 ORTHO05D006804 1.9e-258 895.6 535 78.5
ECA246G1826 Erigeron canadensis HOM05D004282 ORTHO05D006804 4.2e-258 894.4 537 77.8
TWI60G0060 Tripterygium wilfordii HOM05D004282 ORTHO05D006804 5.5e-258 894.0 535 79.3
Lalb_Chr05g0224721 Lupinus albus HOM05D004282 ORTHO05D006804 7.2e-258 893.6 535 78.7
Psat7g032640 Pisum sativum HOM05D004282 ORTHO05D006804 7.2e-258 893.6 535 78.5
arahy.Tifrunner.gnm1.ann1.G1AAHV Arachis hypogaea HOM05D004282 ORTHO05D006804 1.2e-257 892.9 535 78.3
CANSAT21G1770 Cannabis sativa HOM05D004282 ORTHO05D006804 1.2e-257 892.9 535 79.4
Sabra03G0091200 Salix brachista HOM05D004282 ORTHO05D006804 1.6e-257 892.5 535 78.1
Phvul.002G290100 Phaseolus vulgaris HOM05D004282 ORTHO05D006804 2.1e-257 892.1 535 78.7
Cc08_g14800 Coffea canephora HOM05D004282 ORTHO05D006804 1.0e-256 889.8 535 77.8
DCAR_008399 Daucus carota HOM05D004282 ORTHO05D006804 1.3e-256 889.4 536 79.5
Medtr8g098325 Medicago truncatula HOM05D004282 ORTHO05D006804 1.3e-256 889.4 535 77.9
FvH4_5g27720 Fragaria vesca HOM05D004282 ORTHO05D006804 3.0e-256 888.3 535 78.1
arahy.Tifrunner.gnm1.ann1.4VFV1G Arachis hypogaea HOM05D004282 ORTHO05D006804 3.9e-256 887.9 535 77.8
FAN08G1277 Fragaria x ananassa HOM05D004282 ORTHO05D006804 8.7e-256 886.7 535 77.9
Atru.chr9.2181 Acer truncatum HOM05D004282 ORTHO05D006804 1.5e-255 885.9 529 78.4
RcHm_v2.0_Chr7g0219471 Rosa chinensis HOM05D004282 ORTHO05D006804 1.5e-255 885.9 535 77.6
EL10Ac2g04411 Beta vulgaris HOM05D004282 ORTHO05D006804 2.5e-255 885.2 536 78.0
FAN04G0421 Fragaria x ananassa HOM05D004282 ORTHO05D006804 2.5e-255 885.2 535 77.9
ECA233G0272 Erigeron canadensis HOM05D004282 ORTHO05D006804 9.7e-255 883.2 532 79.7
FAN18G3468 Fragaria x ananassa HOM05D004282 ORTHO05D006804 1.6e-254 882.5 542 77.3
Sp2g01000 Schrenkiella parvula HOM05D004282 ORTHO05D006804 2.2e-254 882.1 535 77.9
FAN13G2512 Fragaria x ananassa HOM05D004282 ORTHO05D006804 1.1e-253 879.8 535 77.2
Thhalv10023408m.g Eutrema salsugineum HOM05D004282 ORTHO05D006804 1.4e-253 879.4 535 77.6
Lj4g0008271 Lotus japonicus HOM05D004282 ORTHO05D006804 1.8e-253 879.0 535 77.2
THA.LOC104809396 Tarenaya hassleriana HOM05D004282 ORTHO05D006804 2.4e-253 878.6 535 77.2
Ah.10g038320 Amaranthus hybridus HOM05D004282 ORTHO05D006804 1.2e-252 876.3 536 78.0
AL2G11570 Arabidopsis lyrata HOM05D004282 ORTHO05D006804 1.2e-252 876.3 535 77.4
Gorai.004G212300 Gossypium raimondii HOM05D004282 ORTHO05D006804 1.5e-252 875.9 535 77.9
CARHR047680 Cardamine hirsuta HOM05D004282 ORTHO05D006804 5.9e-252 874.0 535 77.0
THA.LOC104817993 Tarenaya hassleriana HOM05D004282 ORTHO05D006804 1.3e-251 872.8 530 77.5
AT1G63660 Arabidopsis thaliana HOM05D004282 ORTHO05D006804 2.2e-251 872.1 535 77.0
AUR62009455 Chenopodium quinoa HOM05D004282 ORTHO05D006804 6.5e-251 870.5 536 77.2
Carub.0002s0119 Capsella rubella HOM05D004282 ORTHO05D006804 1.4e-250 869.4 535 76.4
AUR62023137 Chenopodium quinoa HOM05D004282 ORTHO05D006804 4.2e-250 867.8 536 76.7
PSO782G4766 Papaver somniferum HOM05D004282 ORTHO05D006804 5.5e-250 867.5 528 77.1
PSO478G3502 Papaver somniferum HOM05D004282 ORTHO05D006804 4.6e-249 864.4 528 76.5
C09p18660 Brassica napus HOM05D004282 ORTHO05D006804 2.3e-248 862.1 536 76.1
SHI07141 Sapria himalayana HOM05D004282 ORTHO05D006804 2.3e-248 862.1 529 75.8
Aa31LG2G870 Aethionema arabicum HOM05D004282 ORTHO05D006804 1.1e-247 859.8 535 76.1
A09p15390 Brassica napus HOM05D004282 ORTHO05D006804 2.0e-247 859.0 535 75.9
BraA09t37181Z Brassica rapa HOM05D004282 ORTHO05D006804 2.6e-247 858.6 535 75.9
vmacro11363 Vaccinium macrocarpon HOM05D004282 ORTHO05D006804 1.7e-246 855.9 682 64.1
Os08g0326600 Oryza sativa ssp. japonica HOM05D004282 ORTHO05D006804 1.4e-245 852.8 528 75.4
BolC9t54762H Brassica oleracea HOM05D004282 ORTHO05D006804 2.4e-245 852.0 536 75.7
MBI17_g24637_MAGBIO Magnolia biondii HOM05D004282 ORTHO05D006804 9.1e-245 850.1 529 76.2
Haze_08786 Corylus avellana HOM05D004282 ORTHO05D006804 2.5e-242 842.0 496 80.6
Zm00001eb434370 Zea mays HOM05D004282 ORTHO05D006804 1.2e-241 839.7 528 74.1
Glyma.08G015000 Glycine max HOM05D004282 ORTHO05D006804 6.1e-241 837.4 494 80.4
GSVIVG01019748001 Vitis vinifera HOM05D004282 ORTHO05D006804 1.5e-239 832.8 535 75.5
vmacro22817 Vaccinium macrocarpon HOM05D004282 ORTHO05D006804 1.6e-236 822.8 666 63.7
Gohir.A08G182900 Gossypium hirsutum HOM05D004282 ORTHO05D006804 2.0e-236 822.4 493 79.5
ATR1101G056 Amborella trichopoda HOM05D004282 ORTHO05D006804 2.0e-228 795.8 559 69.1
AagrBONN_evm.TU.Sc2ySwM_344.3490 Anthoceros agrestis HOM05D004282 ORTHO05D006804 7.2e-226 787.3 527 70.0
Mapoly0002s0326 Marchantia polymorpha HOM05D004282 ORTHO05D006804 4.7e-225 784.6 533 69.4
Pp3c8_7320 Physcomitrium patens HOM05D004282 ORTHO05D006804 4.4e-223 778.1 527 67.6
CBR_g48399 Chara braunii HOM05D004282 ORTHO05D006804 1.7e-214 749.6 532 66.4
SMO116G0368 Selaginella moellendorffii HOM05D004282 ORTHO05D006804 2.2e-214 749.2 535 65.4
Lj2A0T39 Lonicera japonica HOM05D004282 ORTHO05D006804 1.5e-207 726.5 536 68.7
MCO08G312 Micromonas commoda HOM05D004282 ORTHO05D006804 3.3e-202 708.8 525 62.7
Lj2A185G23 Lonicera japonica HOM05D004282 ORTHO05D006804 1.5e-199 699.9 441 76.9
Cre02.g092900 Chlamydomonas reinhardtii HOM05D004282 ORTHO05D006804 1.7e-198 696.4 527 62.2
CDE06G0245 Ceratophyllum demersum HOM05D004282 ORTHO05D006804 6.2e-193 677.9 404 77.2
PRCOL_00000667 Prasinoderma coloniale HOM05D004282 ORTHO05D006804 7.5e-191 671.0 525 61.7
HPP92_014989 Vanilla planifolia HOM05D004282 ORTHO05D006804 2.2e-190 669.5 499 65.3
BcaNung07334 Brassica carinata HOM05D004282 ORTHO05D006804 1.0e-179 634.0 364 80.2
CDE06G1269 Ceratophyllum demersum HOM05D004282 ORTHO05D006804 2.3e-179 632.9 495 65.7
CiPaw.12G092600 Carya illinoinensis HOM05D004282 ORTHO05D006804 2.9e-166 589.3 422 68.5
Sabra01G0078200 Salix brachista HOM05D004282 ORTHO05D006804 5.3e-160 568.5 710 48.9
Cpa.g.c40776 Carica papaya HOM05D004282 ORTHO05D006804 1.9e-138 496.9 299 77.9
Cfa023610 Carpinus fangiana HOM05D004282 ORTHO05D006804 5.0e-134 482.3 536 50.0
SEGI_10668 Sequoiadendron giganteum HOM05D004282 ORTHO05D006804 2.0e-122 443.7 312 69.6
SMO165G0029 Selaginella moellendorffii HOM05D004282 ORTHO05D006804 3.2e-117 426.4 537 45.8
Pp3c3_31480 Physcomitrium patens HOM05D004282 ORTHO05D006804 1.5e-101 374.4 409 48.7
CDE02G0075 Ceratophyllum demersum HOM05D004282 ORTHO05D021217 2.4e-96 357.1 262 65.6
Cpa.g.sc74.54 Carica papaya HOM05D004282 ORTHO05D022242 1.7e-78 297.7 184 76.6
Actinidia14566 Actinidia chinensis HOM05D004282 ORTHO05D017169 2.5e-61 240.7 148 76.4
ECA233G3991 Erigeron canadensis HOM05D004282 ORTHO05D006804 9.6e-61 238.8 148 75.0
CDE02G2749 Ceratophyllum demersum HOM05D004282 ORTHO05D022242 2.1e-44 184.5 140 65.7
ATR0680G380 Amborella trichopoda HOM05D004282 ORTHO05D006804 3.5e-39 167.2 165 49.1
GSVIVG01010145001 Vitis vinifera HOM05D004282 ORTHO05D021217 4.3e-37 160.2 95 80.0
QL09p052209 Quercus lobata HOM05D004282 ORTHO05D022242 1.5e-34 151.8 104 70.2
ATR0680G421 Amborella trichopoda HOM05D004282 ORTHO05D021217 2.2e-33 147.9 87 81.6
CANSAT64G0187 Cannabis sativa HOM05D004282 ORTHO05D006804 9.3e-32 142.5 110 68.2
TAR633G2043 Trochodendron aralioides HOM05D004282 ORTHO05D006540 6.1e-23 113.2 105 56.2
TAR633G2425 Trochodendron aralioides HOM05D004282 ORTHO05D022242 4.8e-20 103.6 99 58.6
RcHm_v2.0_Chr1g0356411 Rosa chinensis HOM05D004282 ORTHO05D341678 3.7e-12 77.4 53 69.8
Cc06_g21260 Coffea canephora HOM05D004282 ORTHO05D017169 9.1e-11 72.8 46 67.4
Dinv38937 Davidia involucrata HOM05D000151 ORTHO05D000074 9.1e-11 72.8 45 77.8
VMungo0464G0647 Vigna mungo HOM05D004282 ORTHO05D021217 1.0e-09 69.3 42 78.6
VMungo0540G0566 Vigna mungo HOM05D004282 ORTHO05D021217 1.0e-09 69.3 42 78.6
SGA_v2.0_scaffold43G16453 Striga asiatica HOM05D004282 ORTHO05D404191 1.7e-09 68.6 41 75.6
RcHm_v2.0_Chr1g0321151 Rosa chinensis HOM05D004282 ORTHO05D022242 9.4e-08 62.8 47 70.2
MELO3C018051.2 Cucumis melo HOM05D001661 ORTHO05D001575 1.6e-07 62.0 140 31.4
RcHm_v2.0_Chr7g0219111 Rosa chinensis HOM05D004282 ORTHO05D022242 2.1e-07 61.6 127 37.0
CsaV3_4G014730 Cucumis sativus L. HOM05D001661 ORTHO05D001575 3.6e-07 60.8 140 31.4
SEGI_03802 Sequoiadendron giganteum HOM05D001661 ORTHO05D001575 3.6e-07 60.8 179 27.9
Actinidia00313 Actinidia chinensis HOM05D001661 ORTHO05D001575 1.0e-06 59.3 131 30.5
ClCG10G009660 Citrullus lanatus HOM05D001661 ORTHO05D001575 1.0e-06 59.3 131 29.0
Lsat_1_v5_gn_9_115821 Lactuca sativa HOM05D001661 ORTHO05D001575 2.3e-06 58.2 155 31.6
Ah.04g149470 Amaranthus hybridus HOM05D003983 ORTHO05D004562 3.0e-06 57.8 201 26.4
PRCOL_00000049 Prasinoderma coloniale HOM05D003983 ORTHO05D004562 3.0e-06 57.8 197 24.4
EL10Ac9g22112 Beta vulgaris HOM05D001661 ORTHO05D001575 3.9e-06 57.4 130 30.0
AUR62030937 Chenopodium quinoa HOM05D001661 ORTHO05D001575 3.9e-06 57.4 130 28.5
SEGI_36481 Sequoiadendron giganteum HOM05D001661 ORTHO05D001575 5.2e-06 57.0 179 26.8
EL10Ac3g07448 Beta vulgaris HOM05D003983 ORTHO05D004562 8.8e-06 56.2 205 24.9
Eucgr.I02609 Eucalyptus grandis HOM05D001661 ORTHO05D001575 8.8e-06 56.2 128 26.6


User provided reference genes

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