Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu019133.1 Olea europaea HOM05D004801 ORTHO05D005747 5.3e-117 424.5 231 100.0
SGA_v2.0_scaffold70G23526 Striga asiatica HOM05D004801 ORTHO05D005747 1.2e-55 220.7 238 59.2
Migut.M00296 Erythranthe guttata HOM05D004801 ORTHO05D005747 9.2e-53 211.1 235 54.5
SGA_v2.0_scaffold34G13950 Striga asiatica HOM05D004801 ORTHO05D005747 1.4e-48 197.2 237 53.2
MSTRG.14326 Avicennia marina HOM05D004801 ORTHO05D005747 5.8e-47 191.8 225 54.7
Hma1.2p1_0002F.1_g001940 Hydrangea macrophylla HOM05D004801 ORTHO05D005747 1.2e-44 184.1 255 49.4
Sed0013547 Sechium edule HOM05D004801 ORTHO05D005747 2.3e-43 179.9 234 51.3
Cc05_g07190 Coffea canephora HOM05D004801 ORTHO05D005747 4.3e-42 175.6 233 49.4
DCAR_013013 Daucus carota HOM05D004801 ORTHO05D005747 7.3e-42 174.9 235 50.6
unitig_46.g18595 Utricularia gibba HOM05D004801 ORTHO05D005747 7.3e-42 174.9 229 50.2
Dinv23632 Davidia involucrata HOM05D004801 ORTHO05D005747 2.8e-41 172.9 259 45.6
Gorai.005G201200 Gossypium raimondii HOM05D004801 ORTHO05D005747 2.8e-41 172.9 237 48.9
CSS0019593 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 3.6e-41 172.6 267 47.2
MELO3C018732.2 Cucumis melo HOM05D004801 ORTHO05D005747 4.7e-41 172.2 241 47.7
MSTRG.12824 Avicennia marina HOM05D004801 ORTHO05D005747 6.2e-41 171.8 235 50.2
Duzib132G1264 Durio zibethinus HOM05D004801 ORTHO05D005747 6.2e-41 171.8 240 44.2
ClCG00G003550 Citrullus lanatus HOM05D004801 ORTHO05D005747 1.1e-40 171.0 238 48.7
ClCG07G002870 Citrullus lanatus HOM05D004801 ORTHO05D005747 1.1e-40 171.0 238 48.7
CsaV3_7G004470 Cucumis sativus L. HOM05D004801 ORTHO05D005747 2.4e-40 169.9 241 47.7
SalBow1G6004 Salvia bowleyana HOM05D004801 ORTHO05D005747 2.4e-40 169.9 233 50.6
Duzib248G0607 Durio zibethinus HOM05D004801 ORTHO05D005747 4.0e-40 169.1 237 49.4
SalBow1G1046 Salvia bowleyana HOM05D004801 ORTHO05D005747 4.0e-40 169.1 233 50.6
Manes.13G146300 Manihot esculenta HOM05D004801 ORTHO05D005747 6.9e-40 168.3 255 44.7
Solyc10g008320.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 9.0e-40 167.9 229 47.6
unitig_37.g12306 Utricularia gibba HOM05D004801 ORTHO05D005747 9.0e-40 167.9 219 46.6
Gohir.A03G156300 Gossypium hirsutum HOM05D004801 ORTHO05D005747 1.5e-39 167.2 239 46.4
Sopen10g004180 Solanum pennellii HOM05D004801 ORTHO05D005747 1.5e-39 167.2 233 46.8
Thecc.02G180400 Theobroma cacao HOM05D004801 ORTHO05D005747 2.2e-38 163.3 246 48.0
COL.COLO4_30200 Corchorus olitorius HOM05D004801 ORTHO05D005747 2.9e-38 162.9 245 46.5
HanXRQChr17g0559281 Helianthus annuus HOM05D004801 ORTHO05D005747 2.9e-38 162.9 228 49.1
Actinidia11029 Actinidia chinensis HOM05D004801 ORTHO05D005747 3.8e-38 162.5 261 48.7
TAR626G1782 Trochodendron aralioides HOM05D004801 ORTHO05D005747 3.8e-38 162.5 272 41.9
Sc21g0002890 Simmondsia chinensis HOM05D004801 ORTHO05D005747 1.4e-37 160.6 238 44.5
VMungo0464G0320 Vigna mungo HOM05D004801 ORTHO05D005747 1.9e-37 160.2 232 46.1
Lj3g0028176 Lotus japonicus HOM05D004801 ORTHO05D005747 4.2e-37 159.1 242 42.6
TWI36G1772 Tripterygium wilfordii HOM05D004801 ORTHO05D005747 7.1e-37 158.3 252 46.4
QL08p038965 Quercus lobata HOM05D004801 ORTHO05D005747 3.5e-36 156.0 239 46.0
PGSC0003DMG400013144 Solanum tuberosum HOM05D004801 ORTHO05D005747 3.5e-36 156.0 234 47.4
Gohir.D02G179400 Gossypium hirsutum HOM05D004801 ORTHO05D005747 6.0e-36 155.2 237 48.1
Haze_13169 Corylus avellana HOM05D004801 ORTHO05D005747 7.8e-36 154.8 251 44.6
vmacro12308 Vaccinium macrocarpon HOM05D004801 ORTHO05D005747 1.3e-35 154.1 254 46.1
ECA234G0944 Erigeron canadensis HOM05D004801 ORTHO05D005747 1.7e-35 153.7 217 48.4
Glyma.13G296700 Glycine max HOM05D004801 ORTHO05D005747 2.3e-35 153.3 235 47.2
Gorai.012G128300 Gossypium raimondii HOM05D004801 ORTHO05D005747 2.3e-35 153.3 243 45.7
Glyma.12G204600 Glycine max HOM05D004801 ORTHO05D005747 3.0e-35 152.9 232 45.3
Cfa014619 Carpinus fangiana HOM05D004801 ORTHO05D005747 8.7e-35 151.4 240 45.4
Lalb_Chr24g0399901 Lupinus albus HOM05D004801 ORTHO05D005747 8.7e-35 151.4 246 43.1
Nitab4.5_0014741g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 1.5e-34 150.6 236 44.5
Peaxi162Scf00059g00194 Petunia axillaris HOM05D004801 ORTHO05D005747 1.5e-34 150.6 241 47.3
Glyma.12G204500 Glycine max HOM05D004801 ORTHO05D005747 3.3e-34 149.4 231 43.3
Ah.08g215280 Amaranthus hybridus HOM05D004801 ORTHO05D005747 5.6e-34 148.7 254 41.7
Nitab4.5_0011784g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 5.6e-34 148.7 239 48.5
RcHm_v2.0_Chr2g0126621 Rosa chinensis HOM05D004801 ORTHO05D005747 7.3e-34 148.3 228 45.6
Ca_01496_v3 Cicer arietinum L. HOM05D004801 ORTHO05D005747 9.6e-34 147.9 228 48.2
MD17G1239900 Malus domestica HOM05D004801 ORTHO05D005747 1.3e-33 147.5 249 44.6
Nitab4.5_0000638g0250 Nicotiana tabacum HOM05D004801 ORTHO05D005747 2.1e-33 146.7 231 45.5
Phvul.004G108200 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 2.8e-33 146.4 231 45.0
Rhsim06G0141800 Rhododendron simsii HOM05D004801 ORTHO05D005747 2.8e-33 146.4 165 56.4
Sed0002865 Sechium edule HOM05D004801 ORTHO05D005747 2.8e-33 146.4 240 46.7
Lalb_Chr14g0366971 Lupinus albus HOM05D004801 ORTHO05D005747 3.6e-33 146.0 248 41.1
Gohir.A04G103500 Gossypium hirsutum HOM05D004801 ORTHO05D005747 4.8e-33 145.6 174 51.7
Gohir.D04G142900 Gossypium hirsutum HOM05D004801 ORTHO05D005747 4.8e-33 145.6 243 45.3
Nitab4.5_0000585g0130 Nicotiana tabacum HOM05D004801 ORTHO05D005747 4.8e-33 145.6 230 49.1
Phvul.004G108100 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 6.2e-33 145.2 232 48.7
Dinv26411 Davidia involucrata HOM05D004801 ORTHO05D005747 8.1e-33 144.8 241 40.2
A08p20130 Brassica napus HOM05D004801 ORTHO05D005747 1.4e-32 144.1 226 43.8
CiPaw.03G177800 Carya illinoinensis HOM05D004801 ORTHO05D005747 3.1e-32 142.9 235 44.3
GSVIVG01020552001 Vitis vinifera HOM05D004801 ORTHO05D005747 3.1e-32 142.9 92 70.7
AUR62022461 Chenopodium quinoa HOM05D004801 ORTHO05D005747 4.0e-32 142.5 249 43.0
AUR62040063 Chenopodium quinoa HOM05D004801 ORTHO05D005747 4.0e-32 142.5 261 44.4
Lsat_1_v5_gn_8_135921 Lactuca sativa HOM05D004801 ORTHO05D005747 6.9e-32 141.7 237 42.2
Prupe.3G132500 Prunus persica HOM05D004801 ORTHO05D005747 9.0e-32 141.4 259 44.4
AT4G28310 Arabidopsis thaliana HOM05D004801 ORTHO05D005747 1.5e-31 140.6 230 42.6
arahy.Tifrunner.gnm1.ann1.G6M6JD Arachis hypogaea HOM05D004801 ORTHO05D005747 1.5e-31 140.6 235 43.4
BraA08t33972Z Brassica rapa HOM05D004801 ORTHO05D005747 1.5e-31 140.6 225 43.1
Lsat_1_v5_gn_8_135941 Lactuca sativa HOM05D004801 ORTHO05D005747 2.0e-31 140.2 246 43.9
arahy.Tifrunner.gnm1.ann1.KJ31KE Arachis hypogaea HOM05D004801 ORTHO05D005747 3.4e-31 139.4 235 43.4
VMungo0464G1438 Vigna mungo HOM05D004801 ORTHO05D005747 3.4e-31 139.4 231 46.3
Cpa.g.sc34.170 Carica papaya HOM05D004801 ORTHO05D005747 5.8e-31 138.7 221 43.9
Thhalv10027270m.g Eutrema salsugineum HOM05D004801 ORTHO05D005747 7.6e-31 138.3 162 50.0
SalBow7G4382 Salvia bowleyana HOM05D004801 ORTHO05D005747 1.3e-30 137.5 197 51.3
FvH4_6g26250 Fragaria vesca HOM05D004801 ORTHO05D005747 1.7e-30 137.1 227 43.6
CAN.G578.5 Capsicum annuum HOM05D004801 ORTHO05D005747 2.2e-30 136.7 88 76.1
Peaxi162Scf00132g00008 Petunia axillaris HOM05D004801 ORTHO05D005747 2.9e-30 136.3 232 46.1
HPP92_008364 Vanilla planifolia HOM05D004801 ORTHO05D005747 6.4e-30 135.2 230 41.3
SHI10398 Sapria himalayana HOM05D004801 ORTHO05D005747 1.1e-29 134.4 179 45.3
CARHR236030 Cardamine hirsuta HOM05D004801 ORTHO05D005747 2.4e-29 133.3 229 41.5
THA.LOC104824700 Tarenaya hassleriana HOM05D004801 ORTHO05D005747 3.2e-29 132.9 226 42.5
BcaB03g12566 Brassica carinata HOM05D004801 ORTHO05D005747 4.2e-29 132.5 229 43.7
BolC8t48753H Brassica oleracea HOM05D004801 ORTHO05D005747 4.2e-29 132.5 226 43.4
Potri.013G130700 Populus trichocarpa HOM05D004801 ORTHO05D005747 4.2e-29 132.5 236 44.1
Atru.chr6.2990 Acer truncatum HOM05D004801 ORTHO05D005747 9.3e-29 131.3 233 42.5
Sabra13G0110300 Salix brachista HOM05D004801 ORTHO05D005747 1.2e-28 131.0 193 47.2
Aa31LG2G22170 Aethionema arabicum HOM05D004801 ORTHO05D005747 2.1e-28 130.2 227 39.6
Sp7g26270 Schrenkiella parvula HOM05D004801 ORTHO05D005747 2.1e-28 130.2 226 41.2
TPR.G6396 Trifolium pratense HOM05D004801 ORTHO05D005747 2.1e-28 130.2 240 42.1
Eucgr.A01822 Eucalyptus grandis HOM05D004801 ORTHO05D005747 2.7e-28 129.8 274 42.3
CSS0042810 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 3.5e-28 129.4 241 41.5
Aqoxy4G01981 Aquilegia oxysepala HOM05D004801 ORTHO05D005747 7.9e-28 128.3 83 68.7
FAN09G3815 Fragaria x ananassa HOM05D004801 ORTHO05D005747 7.9e-28 128.3 71 81.7
EL10Ac9g20770 Beta vulgaris HOM05D004801 ORTHO05D005747 1.0e-27 127.9 254 42.1
BcaC07g38324 Brassica carinata HOM05D004801 ORTHO05D005747 1.0e-27 127.9 201 43.3
C08p10790 Brassica napus HOM05D004801 ORTHO05D005747 1.0e-27 127.9 201 43.3
Medtr2g090385 Medicago truncatula HOM05D004801 ORTHO05D005747 1.0e-27 127.9 237 43.9
Sopen07g027930 Solanum pennellii HOM05D004801 ORTHO05D005747 1.0e-27 127.9 182 44.0
Aa31LG10G480 Aethionema arabicum HOM05D004801 ORTHO05D005747 1.3e-27 127.5 157 46.5
BcaNung01577 Brassica carinata HOM05D004801 ORTHO05D005747 1.8e-27 127.1 228 41.2
PGSC0003DMG400018341 Solanum tuberosum HOM05D004801 ORTHO05D005747 3.0e-27 126.3 180 47.8
BraA01t01904Z Brassica rapa HOM05D004801 ORTHO05D005747 6.7e-27 125.2 169 46.2
AL7G24290 Arabidopsis lyrata HOM05D004801 ORTHO05D005747 8.7e-27 124.8 228 44.3
FAN02G2956 Fragaria x ananassa HOM05D004801 ORTHO05D005747 8.7e-27 124.8 150 50.0
PGR042G3918 Punica granatum HOM05D004801 ORTHO05D005747 1.1e-26 124.4 102 64.7
Glyma.13G296800 Glycine max HOM05D004801 ORTHO05D005747 1.9e-26 123.6 125 55.2
Ciclev10016785m.g Citrus clementina HOM05D004801 ORTHO05D005747 2.5e-26 123.2 229 38.9
Solyc07g053950.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 2.5e-26 123.2 181 44.2
Psat5g270840 Pisum sativum HOM05D004801 ORTHO05D005747 3.3e-26 122.9 163 52.1
C01p24790 Brassica napus HOM05D004801 ORTHO05D005747 4.3e-26 122.5 162 46.3
MBI18_g28947_MAGBIO Magnolia biondii HOM05D004801 ORTHO05D005747 2.8e-25 119.8 232 40.1
BcaC09g50492 Brassica carinata HOM05D004801 ORTHO05D005747 6.2e-25 118.6 227 39.2
BolC1t02426H Brassica oleracea HOM05D004801 ORTHO05D005747 8.1e-25 118.2 228 39.0
BcaC06g32627 Brassica carinata HOM05D004801 ORTHO05D005747 3.1e-24 116.3 205 39.0
BcaC06g32628 Brassica carinata HOM05D004801 ORTHO05D005747 3.1e-24 116.3 205 39.0
PSO357G0555 Papaver somniferum HOM05D004801 ORTHO05D005747 9.0e-24 114.8 94 64.9
A03p58010 Brassica napus HOM05D004801 ORTHO05D005747 1.5e-23 114.0 160 45.6
BraA03t14864Z Brassica rapa HOM05D004801 ORTHO05D005747 1.5e-23 114.0 160 45.6
PSO170G5688 Papaver somniferum HOM05D004801 ORTHO05D005747 2.0e-23 113.6 94 63.8
Carub.0007s1244 Capsella rubella HOM05D004801 ORTHO05D005747 2.6e-23 113.2 227 43.2
Lj1P721T18 Lonicera japonica HOM05D004801 ORTHO05D005747 4.5e-23 112.5 105 63.8
Zm00001eb269130 Zea mays HOM05D004801 ORTHO05D005747 9.9e-23 111.3 94 62.8
Os06g0115700 Oryza sativa ssp. japonica HOM05D004801 ORTHO05D005747 1.7e-22 110.5 95 58.9
C07p56130 Brassica napus HOM05D004801 ORTHO05D005747 2.2e-22 110.2 203 39.4
SEGI_29524 Sequoiadendron giganteum HOM05D004801 ORTHO05D005747 1.9e-21 107.1 102 50.0
BolC7t46088H Brassica oleracea HOM05D004801 ORTHO05D005747 4.2e-21 105.9 160 45.0
Psat5g272360 Pisum sativum HOM05D004801 ORTHO05D005747 1.2e-20 104.4 205 43.9
Mapoly0078s0017 Marchantia polymorpha HOM05D004801 ORTHO05D005747 2.7e-20 103.2 95 51.6
ATR0124G030 Amborella trichopoda HOM05D004801 ORTHO05D005747 6.0e-20 102.1 227 36.1
Pp3c17_13330 Physcomitrium patens HOM05D004801 ORTHO05D005747 5.1e-19 99.0 77 58.4
Pp3c14_12710 Physcomitrium patens HOM05D004801 ORTHO05D005747 2.5e-18 96.7 83 53.0
AagrBONN_evm.TU.Sc2ySwM_344.3370 Anthoceros agrestis HOM05D004801 ORTHO05D005747 6.2e-17 92.0 80 56.2
SalBow1G0370 Salvia bowleyana HOM05D004801 ORTHO05D005747 1.3e-14 84.3 170 39.4
SalBow7G4186 Salvia bowleyana HOM05D000074 ORTHO05D000220 1.7e-14 84.0 163 41.7
MSTRG.14327 Avicennia marina HOM05D004801 ORTHO05D005747 7.9e-12 75.1 115 51.3
BcaNung01357 Brassica carinata HOM05D004801 ORTHO05D005747 8.7e-11 71.6 221 32.1
Cpa.g.sc34.169 Carica papaya HOM05D004801 ORTHO05D005747 4.1e-08 62.8 156 31.4
SalBow4G0268 Salvia bowleyana HOM05D004801 ORTHO05D005747 5.9e-07 58.9 121 42.1


User provided reference genes

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