Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu019042.1 Olea europaea HOM05D003867 ORTHO05D004593 6.3e-285 983.4 488 100.0
Oeu020305.1 Olea europaea HOM05D003867 ORTHO05D004593 4.3e-278 960.7 488 96.9
TAR374G1237 Trochodendron aralioides HOM05D003867 ORTHO05D004593 2.5e-265 918.3 488 92.0
Lalb_Chr03g0037281 Lupinus albus HOM05D003867 ORTHO05D004593 9.4e-265 916.4 483 91.9
Nitab4.5_0000271g0190 Nicotiana tabacum HOM05D003867 ORTHO05D004593 9.4e-265 916.4 487 90.6
Potri.010G057400 Populus trichocarpa HOM05D003867 ORTHO05D004593 2.7e-264 914.8 486 91.2
Migut.E00031 Erythranthe guttata HOM05D003867 ORTHO05D004593 3.6e-264 914.4 488 91.4
Nn4g22382 Nelumbo nucifera HOM05D003867 ORTHO05D004593 3.6e-264 914.4 488 91.6
Solyc02g087240.4 Solanum lycopersicum HOM05D003867 ORTHO05D004593 3.6e-264 914.4 488 90.6
Sopen02g031980 Solanum pennellii HOM05D003867 ORTHO05D004593 3.6e-264 914.4 488 90.6
Nn3g16522 Nelumbo nucifera HOM05D003867 ORTHO05D004593 4.7e-264 914.1 488 91.6
Duzib251G0884 Durio zibethinus HOM05D003867 ORTHO05D004593 6.1e-264 913.7 486 90.5
Peaxi162Scf00128g01017 Petunia axillaris HOM05D003867 ORTHO05D004593 8.0e-264 913.3 487 90.8
Thecc.02G275800 Theobroma cacao HOM05D003867 ORTHO05D004593 1.0e-263 912.9 486 90.9
DCAR_031187 Daucus carota HOM05D003867 ORTHO05D004593 1.4e-263 912.5 487 91.2
Manes.12G014300 Manihot esculenta HOM05D003867 ORTHO05D004593 1.4e-263 912.5 486 90.7
Sed0026140 Sechium edule HOM05D003867 ORTHO05D004593 1.4e-263 912.5 486 92.0
Gorai.001G109800 Gossypium raimondii HOM05D003867 ORTHO05D004593 1.8e-263 912.1 486 90.5
PGSC0003DMG400001292 Solanum tuberosum HOM05D003867 ORTHO05D004593 1.8e-263 912.1 488 90.0
TPR.G25178 Trifolium pratense HOM05D003867 ORTHO05D004593 2.3e-263 911.8 481 90.9
Gohir.A12G147700 Gossypium hirsutum HOM05D003867 ORTHO05D004593 3.0e-263 911.4 486 89.5
THA.LOC104819362 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 3.0e-263 911.4 486 92.0
CSS0008021 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 3.9e-263 911.0 486 89.9
Prupe.1G231900 Prunus persica HOM05D003867 ORTHO05D004593 3.9e-263 911.0 486 92.2
Duzib268G1394 Durio zibethinus HOM05D003867 ORTHO05D004593 5.2e-263 910.6 486 90.7
Gohir.D12G152000 Gossypium hirsutum HOM05D003867 ORTHO05D004593 6.7e-263 910.2 486 90.3
Gorai.008G164400 Gossypium raimondii HOM05D003867 ORTHO05D004593 6.7e-263 910.2 485 90.7
TWI36G0688 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 6.7e-263 910.2 486 90.9
MSTRG.7988 Avicennia marina HOM05D003867 ORTHO05D004593 2.0e-262 908.7 488 91.6
CSS0021164 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 2.0e-262 908.7 486 89.9
COL.COLO4_12823 Corchorus olitorius HOM05D003867 ORTHO05D004593 2.0e-262 908.7 486 89.7
DCAR_007011 Daucus carota HOM05D003867 ORTHO05D004593 2.0e-262 908.7 488 91.2
CAN.G206.61 Capsicum annuum HOM05D003867 ORTHO05D004593 2.6e-262 908.3 487 89.7
SGA_v2.0_scaffold63G21760 Striga asiatica HOM05D003867 ORTHO05D004593 2.6e-262 908.3 488 91.0
Gohir.D07G101900 Gossypium hirsutum HOM05D003867 ORTHO05D004593 3.3e-262 907.9 486 90.1
MD13G1115400 Malus domestica HOM05D003867 ORTHO05D004593 3.3e-262 907.9 486 91.6
arahy.Tifrunner.gnm1.ann1.VZW0IR Arachis hypogaea HOM05D003867 ORTHO05D004593 4.4e-262 907.5 483 90.9
A10p28200 Brassica napus HOM05D003867 ORTHO05D004593 4.4e-262 907.5 486 92.0
SGA_v2.0_scaffold347G49568 Striga asiatica HOM05D003867 ORTHO05D004593 5.7e-262 907.1 488 90.8
Hund25446 Selenicereus undatus HOM05D003867 ORTHO05D004593 9.7e-262 906.4 483 90.5
BraA10t44869Z Brassica rapa HOM05D003867 ORTHO05D004593 1.3e-261 906.0 485 92.0
MD16G1115300 Malus domestica HOM05D003867 ORTHO05D004593 1.3e-261 906.0 486 92.0
Peaxi162Scf00449g00825 Petunia axillaris HOM05D003867 ORTHO05D004593 1.3e-261 906.0 479 90.8
CDE09G0709 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 1.7e-261 905.6 487 89.9
C09p68410 Brassica napus HOM05D003867 ORTHO05D004593 2.2e-261 905.2 488 92.0
BolC9t59588H Brassica oleracea HOM05D003867 ORTHO05D004593 2.2e-261 905.2 485 92.0
Gohir.A07G097600 Gossypium hirsutum HOM05D003867 ORTHO05D004593 2.2e-261 905.2 486 89.3
Lalb_Chr01g0021001 Lupinus albus HOM05D003867 ORTHO05D004593 2.2e-261 905.2 483 90.9
RcHm_v2.0_Chr4g0430891 Rosa chinensis HOM05D003867 ORTHO05D004593 2.2e-261 905.2 486 91.8
Ca_12000_v3 Cicer arietinum L. HOM05D003867 ORTHO05D004593 2.8e-261 904.8 482 90.5
Medtr1g042300 Medicago truncatula HOM05D003867 ORTHO05D004593 2.8e-261 904.8 481 90.4
Haze_12379 Corylus avellana HOM05D003867 ORTHO05D004593 3.7e-261 904.4 485 90.5
CARHR204460 Cardamine hirsuta HOM05D003867 ORTHO05D004593 4.8e-261 904.0 486 91.4
ECA232G3717 Erigeron canadensis HOM05D003867 ORTHO05D004593 4.8e-261 904.0 483 90.7
Lj6g0022289 Lotus japonicus HOM05D003867 ORTHO05D004593 4.8e-261 904.0 481 91.5
Hund06074 Selenicereus undatus HOM05D003867 ORTHO05D004593 4.8e-261 904.0 485 89.9
TWI75G1178 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 4.8e-261 904.0 486 89.1
Aqoxy3G01483 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 8.2e-261 903.3 486 90.9
C03p04400 Brassica napus HOM05D003867 ORTHO05D004593 8.2e-261 903.3 486 91.8
Sp6g34370 Schrenkiella parvula HOM05D003867 ORTHO05D004593 8.2e-261 903.3 486 91.4
BcaB08g37249 Brassica carinata HOM05D003867 ORTHO05D004593 1.1e-260 902.9 486 92.0
CsaV3_3G039600 Cucumis sativus L. HOM05D003867 ORTHO05D004593 1.4e-260 902.5 486 90.3
Duzib248G0225 Durio zibethinus HOM05D003867 ORTHO05D004593 1.4e-260 902.5 486 89.9
FvH4_4g24110 Fragaria vesca HOM05D003867 ORTHO05D004593 1.4e-260 902.5 486 91.2
Carub.0006s0748 Capsella rubella HOM05D003867 ORTHO05D004593 2.4e-260 901.7 486 91.4
CANSAT64G1093 Cannabis sativa HOM05D003867 ORTHO05D004593 3.1e-260 901.4 483 90.3
MELO3C009702.2 Cucumis melo HOM05D003867 ORTHO05D004593 3.1e-260 901.4 486 90.1
Thhalv10013394m.g Eutrema salsugineum HOM05D003867 ORTHO05D004593 3.1e-260 901.4 486 91.2
Lsat_1_v5_gn_4_184020 Lactuca sativa HOM05D003867 ORTHO05D004593 3.1e-260 901.4 485 91.8
BcaB01g05588 Brassica carinata HOM05D003867 ORTHO05D004593 4.1e-260 901.0 486 91.2
CiPaw.05G113400 Carya illinoinensis HOM05D003867 ORTHO05D004593 4.1e-260 901.0 486 89.5
PSO063G4816 Papaver somniferum HOM05D003867 ORTHO05D004593 4.1e-260 901.0 489 90.8
AT5G08530 Arabidopsis thaliana HOM05D003867 ORTHO05D004593 5.3e-260 900.6 486 91.2
HanXRQChr09g0255191 Helianthus annuus HOM05D003867 ORTHO05D004593 5.3e-260 900.6 480 91.0
A03p03890 Brassica napus HOM05D003867 ORTHO05D004593 7.0e-260 900.2 487 90.3
Cpa.g.sc257.6 Carica papaya HOM05D003867 ORTHO05D004593 7.0e-260 900.2 486 89.5
PGR119G1061 Punica granatum HOM05D003867 ORTHO05D004593 7.0e-260 900.2 491 89.8
QL03p054504 Quercus lobata HOM05D003867 ORTHO05D004593 9.1e-260 899.8 486 90.3
AL6G19230 Arabidopsis lyrata HOM05D003867 ORTHO05D004593 1.2e-259 899.4 486 91.2
Glyma.10G005500 Glycine max HOM05D003867 ORTHO05D004593 1.2e-259 899.4 481 90.2
THA.LOC104818400 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 1.6e-259 899.0 488 91.2
Aa31LG3G18010 Aethionema arabicum HOM05D003867 ORTHO05D004593 2.0e-259 898.7 486 90.3
HanXRQChr15g0486841 Helianthus annuus HOM05D003867 ORTHO05D004593 2.0e-259 898.7 480 90.4
vmacro15114 Vaccinium macrocarpon HOM05D003867 ORTHO05D004593 2.6e-259 898.3 486 89.3
Glyma.02G003300 Glycine max HOM05D003867 ORTHO05D004593 3.5e-259 897.9 481 90.0
PSO782G1516 Papaver somniferum HOM05D003867 ORTHO05D004593 5.9e-259 897.1 489 90.4
Rhsim12G0153900 Rhododendron simsii HOM05D003867 ORTHO05D004593 1.0e-258 896.3 486 89.5
Sabra10G0047900 Salix brachista HOM05D003867 ORTHO05D004593 1.0e-258 896.3 485 89.1
Phvul.007G274700 Phaseolus vulgaris HOM05D003867 ORTHO05D004593 1.3e-258 896.0 481 91.1
BraA03t09737Z Brassica rapa HOM05D003867 ORTHO05D004593 1.7e-258 895.6 484 91.7
ClCG02G006860 Citrullus lanatus HOM05D003867 ORTHO05D004593 1.7e-258 895.6 486 89.3
Eucgr.H04659 Eucalyptus grandis HOM05D003867 ORTHO05D004593 1.7e-258 895.6 486 90.3
Psat6g040120 Pisum sativum HOM05D003867 ORTHO05D004593 1.7e-258 895.6 481 89.8
Ah.03g133960 Amaranthus hybridus HOM05D003867 ORTHO05D004593 2.2e-258 895.2 482 89.8
MBI11_g06772_MAGBIO Magnolia biondii HOM05D003867 ORTHO05D004593 2.2e-258 895.2 488 88.7
VMungo0720G1468 Vigna mungo HOM05D003867 ORTHO05D004593 2.9e-258 894.8 490 91.2
BolC3t12971H Brassica oleracea HOM05D003867 ORTHO05D004593 8.5e-258 893.3 483 91.3
EL10Ac6g13463 Beta vulgaris HOM05D003867 ORTHO05D004593 1.1e-257 892.9 484 89.5
Zm00001eb329270 Zea mays HOM05D003867 ORTHO05D004593 4.2e-257 891.0 459 95.4
ATR0564G372 Amborella trichopoda HOM05D003867 ORTHO05D004593 7.2e-257 890.2 484 88.6
ATR0665G595 Amborella trichopoda HOM05D003867 ORTHO05D004593 9.4e-257 889.8 484 89.0
Zm00001eb110430 Zea mays HOM05D003867 ORTHO05D004593 1.8e-255 885.6 459 95.0
Os07g0645400 Oryza sativa ssp. japonica HOM05D003867 ORTHO05D004593 2.3e-255 885.2 460 94.3
Rhsim12G0103900 Rhododendron simsii HOM05D003867 ORTHO05D004593 4.0e-255 884.4 473 90.5
Sc04g0010000 Simmondsia chinensis HOM05D003867 ORTHO05D004593 8.8e-255 883.2 479 89.1
Ciclev10033600m.g Citrus clementina HOM05D003867 ORTHO05D004593 2.2e-253 878.6 436 94.0
Cc11_g16710 Coffea canephora HOM05D003867 ORTHO05D004593 4.2e-249 864.4 460 91.3
SEGI_02035 Sequoiadendron giganteum HOM05D003867 ORTHO05D004593 1.4e-247 859.4 483 87.6
Pp3c4_17990 Physcomitrium patens HOM05D003867 ORTHO05D004593 6.3e-245 850.5 430 92.6
SMO141G0212 Selaginella moellendorffii HOM05D003867 ORTHO05D004593 6.3e-245 850.5 437 90.8
AagrBONN_evm.TU.Sc2ySwM_117.2067 Anthoceros agrestis HOM05D003867 ORTHO05D004593 1.4e-244 849.4 438 90.6
Pp3c12_4050 Physcomitrium patens HOM05D003867 ORTHO05D004593 2.4e-244 848.6 430 92.3
HanXRQChr15g0475281 Helianthus annuus HOM05D003867 ORTHO05D004593 5.0e-242 840.9 480 82.7
Mapoly0052s0094 Marchantia polymorpha HOM05D003867 ORTHO05D004593 1.5e-241 839.3 495 84.4
Lsat_1_v5_gn_0_47760 Lactuca sativa HOM05D003867 ORTHO05D004593 1.5e-238 829.3 431 89.3
CiPaw.06G100100 Carya illinoinensis HOM05D003867 ORTHO05D004593 4.4e-238 827.8 407 95.3
CBR_g4558 Chara braunii HOM05D003867 ORTHO05D004593 3.7e-237 824.7 434 88.2
unitig_21.g20878 Utricularia gibba HOM05D003867 ORTHO05D004593 2.4e-236 822.0 409 95.1
arahy.Tifrunner.gnm1.ann1.IM3BGM Arachis hypogaea HOM05D003867 ORTHO05D004593 5.4e-236 820.8 407 94.6
AUR62024144 Chenopodium quinoa HOM05D003867 ORTHO05D004593 2.7e-235 818.5 406 94.3
AUR62005586 Chenopodium quinoa HOM05D003867 ORTHO05D004593 1.0e-234 816.6 405 94.3
MCO16G634 Micromonas commoda HOM05D003867 ORTHO05D004593 1.6e-227 792.7 433 85.2
CDE02G4050 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 7.3e-225 783.9 487 79.5
Dinv37748 Davidia involucrata HOM05D003867 ORTHO05D004593 2.3e-223 778.9 386 95.6
PRCOL_00003927 Prasinoderma coloniale HOM05D003867 ORTHO05D004593 1.3e-218 763.1 427 82.4
CBR_g30767 Chara braunii HOM05D003867 ORTHO05D004593 5.1e-218 761.1 420 82.4
Cre10.g422600 Chlamydomonas reinhardtii HOM05D003867 ORTHO05D004593 4.3e-217 758.1 435 80.9
Dinv39063 Davidia involucrata HOM05D003867 ORTHO05D004593 3.3e-209 731.9 392 89.0
Sed0024813 Sechium edule HOM05D003867 ORTHO05D004593 3.6e-208 728.4 480 78.3
Actinidia08082 Actinidia chinensis HOM05D003867 ORTHO05D004593 4.6e-203 711.4 393 87.8
SGA_v2.0_scaffold1484G53963 Striga asiatica HOM05D003867 ORTHO05D004593 7.4e-193 677.6 369 90.2
Nn7g37842 Nelumbo nucifera HOM05D003867 ORTHO05D004593 3.8e-189 665.2 346 91.3
Haze_26697 Corylus avellana HOM05D003867 ORTHO05D004593 5.6e-185 651.4 395 75.4
HPP92_000985 Vanilla planifolia HOM05D003867 ORTHO05D004593 6.0e-179 631.3 317 94.0
FAN17G1814 Fragaria x ananassa HOM05D003867 ORTHO05D004593 6.7e-178 627.9 486 68.7
FAN12G0392 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.6e-168 596.7 486 66.5
FAN22G0799 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.6e-168 596.7 486 66.5
FAN07G1251 Fragaria x ananassa HOM05D003867 ORTHO05D004593 2.6e-166 589.3 486 66.3
unitig_744.g24299 Utricularia gibba HOM05D003867 ORTHO05D004593 7.7e-166 587.8 331 88.5
Nn3g20865 Nelumbo nucifera HOM05D003867 ORTHO05D004593 7.2e-148 528.1 279 89.6
Actinidia20690 Actinidia chinensis HOM05D003867 ORTHO05D004593 4.7e-139 498.8 351 71.2
Haze_26928 Corylus avellana HOM05D003867 ORTHO05D004593 1.6e-126 457.2 276 76.1
TAR629G2520 Trochodendron aralioides HOM05D003867 ORTHO05D004593 5.8e-113 412.1 203 95.6
Aqoxy3G01811 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 1.6e-99 367.5 180 93.3
Actinidia09668 Actinidia chinensis HOM05D003867 ORTHO05D004593 4.4e-97 359.4 222 77.9
TAR629G2231 Trochodendron aralioides HOM05D003867 ORTHO05D004593 1.0e-93 348.2 174 94.8
CSS0023173 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 3.6e-91 339.7 170 92.9
Nitab4.5_0000581g0020 Nicotiana tabacum HOM05D003867 ORTHO05D004593 1.1e-82 311.6 487 41.1
Atru.chr11.2286 Acer truncatum HOM05D003867 ORTHO05D004593 7.4e-76 288.9 146 91.1
Lj6P823T18 Lonicera japonica HOM05D003867 ORTHO05D004593 1.9e-68 264.2 146 86.3
unitig_744.g24298 Utricularia gibba HOM05D003867 ORTHO05D004593 5.3e-66 256.1 129 95.3
HPP92_000984 Vanilla planifolia HOM05D003867 ORTHO05D004593 2.2e-64 250.8 164 80.5
MD16G1114900 Malus domestica HOM05D003867 ORTHO05D004593 2.9e-64 250.4 127 91.3
GSVIVG01020401001 Vitis vinifera HOM05D003867 ORTHO05D004593 2.0e-57 227.6 147 84.4
Aqoxy84s003 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 1.9e-55 221.1 259 45.2
MD16G1114800 Malus domestica HOM05D003867 ORTHO05D004593 1.5e-49 201.4 100 93.0
Nn8g40622 Nelumbo nucifera HOM05D003867 ORTHO05D004593 2.0e-49 201.1 102 93.1
Actinidia09669 Actinidia chinensis HOM05D003867 ORTHO05D004593 9.7e-44 182.2 127 74.0
BcaC03g13233 Brassica carinata HOM05D003155 ORTHO05D012487 1.1e-36 158.7 102 76.5
C02p03650 Brassica napus HOM05D003867 ORTHO05D004593 6.3e-35 152.9 76 96.1
BolC2t06324H Brassica oleracea HOM05D003867 ORTHO05D004593 6.3e-35 152.9 76 96.1
Potri.008G177801 Populus trichocarpa HOM05D003867 ORTHO05D004593 7.0e-34 149.4 108 66.7
Duzib128G1406 Durio zibethinus HOM05D003867 ORTHO05D004593 5.2e-29 133.3 197 37.6
BcaC03g13232 Brassica carinata HOM05D003867 ORTHO05D004593 6.7e-29 132.9 68 95.6
FAN03G1235 Fragaria x ananassa HOM05D003867 ORTHO05D004593 3.3e-28 130.6 70 88.6
FAN15G0422 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.1e-26 125.6 68 86.8
Nn1g01167 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.1e-26 125.6 65 92.3
Nn1g01168 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.1e-26 125.6 65 92.3
FAN07G1961 Fragaria x ananassa HOM05D003867 ORTHO05D004593 5.9e-25 119.8 65 86.2
FAN08G0425 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.3e-24 118.6 65 84.6
GSVIVG01013345001 Vitis vinifera HOM05D003867 ORTHO05D004593 8.0e-22 109.4 67 70.1
Pp3c3_8640 Physcomitrium patens HOM05D003867 ORTHO05D004593 1.0e-21 109.0 83 66.3
Atru.chr11.2285 Acer truncatum HOM05D003867 ORTHO05D004593 2.6e-20 104.4 67 70.1
Pp3c13_10840 Physcomitrium patens HOM05D003867 ORTHO05D004593 1.0e-16 92.4 48 89.6
Hund25436 Selenicereus undatus HOM05D000424 ORTHO05D008586 2.9e-16 90.9 168 36.3
FvH4_1g23805 Fragaria vesca HOM05D000280 ORTHO05D000632 1.4e-13 82.0 71 60.6
FvH4_3g23161 Fragaria vesca HOM05D011771 ORTHO05D014214 5.2e-13 80.1 72 59.7
FvH4_3g31747 Fragaria vesca HOM05D011771 ORTHO05D014214 1.2e-12 79.0 72 59.7
FvH4_7g28392 Fragaria vesca HOM05D003867 ORTHO05D196806 9.2e-10 69.3 61 60.7
Nitab4.5_0027010g0010 Nicotiana tabacum HOM05D003867 ORTHO05D004593 1.5e-07 62.0 61 63.9
Duzib052G0593 Durio zibethinus HOM05D000222 ORTHO05D001350 6.1e-06 56.6 40 65.0


User provided reference genes

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