Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu018833.1 Olea europaea HOM05D002119 ORTHO05D002209 1.6e-43 179.1 94 100.0
Oeu008650.1 Olea europaea HOM05D002119 ORTHO05D002209 1.6e-24 115.9 77 76.6
Dinv22021 Davidia involucrata HOM05D002119 ORTHO05D002209 2.6e-22 108.6 77 71.4
Rhsim07G0215000 Rhododendron simsii HOM05D002119 ORTHO05D002209 4.5e-22 107.8 77 71.4
Hma1.2p1_1548F.1_g290010 Hydrangea macrophylla HOM05D002119 ORTHO05D002209 7.6e-22 107.1 77 66.2
CSS0027091 Camellia sinensis var. sinensis HOM05D002119 ORTHO05D002209 1.0e-21 106.7 77 71.4
vmacro04618 Vaccinium macrocarpon HOM05D002119 ORTHO05D002209 2.2e-21 105.5 77 68.8
Migut.N02828 Erythranthe guttata HOM05D002119 ORTHO05D002209 3.8e-21 104.8 85 63.5
Lsat_1_v5_gn_1_741 Lactuca sativa HOM05D002119 ORTHO05D002209 3.8e-21 104.8 91 62.6
Actinidia29646 Actinidia chinensis HOM05D002119 ORTHO05D002209 4.9e-21 104.4 77 68.8
Dinv44896 Davidia involucrata HOM05D002119 ORTHO05D002209 4.9e-21 104.4 77 70.1
TAR381G0137 Trochodendron aralioides HOM05D002119 ORTHO05D002209 2.5e-20 102.1 74 66.2
GSVIVG01009244001 Vitis vinifera HOM05D002119 ORTHO05D002209 5.5e-20 100.9 78 64.1
Ciclev10000105m.g Citrus clementina HOM05D002119 ORTHO05D002209 7.1e-20 100.5 74 64.9
DCAR_019334 Daucus carota HOM05D002119 ORTHO05D002209 2.7e-19 98.6 77 66.2
Atru.chr13.928 Acer truncatum HOM05D002119 ORTHO05D002209 3.5e-19 98.2 77 61.0
MD15G1393300 Malus domestica HOM05D002119 ORTHO05D002209 1.3e-18 96.3 77 59.7
Manes.18G054500 Manihot esculenta HOM05D002119 ORTHO05D002209 1.8e-18 95.9 75 64.0
Prupe.1G541600 Prunus persica HOM05D002119 ORTHO05D002209 3.0e-18 95.1 77 59.7
CANSAT25G3498 Cannabis sativa HOM05D002119 ORTHO05D002209 3.9e-18 94.7 77 63.6
ECA247G3004 Erigeron canadensis HOM05D002119 ORTHO05D002209 3.9e-18 94.7 77 62.3
TWI56G0097 Tripterygium wilfordii HOM05D002119 ORTHO05D002209 1.5e-17 92.8 88 54.5
COL.COLO4_35342 Corchorus olitorius HOM05D002119 ORTHO05D002209 3.3e-17 91.7 77 58.4
Nn5g29745 Nelumbo nucifera HOM05D002119 ORTHO05D002209 3.3e-17 91.7 74 58.1
QL12p040240 Quercus lobata HOM05D002119 ORTHO05D002209 3.3e-17 91.7 77 58.4
MSTRG.24416 Avicennia marina HOM05D002119 ORTHO05D002209 7.4e-17 90.5 77 61.0
Nitab4.5_0000377g0150 Nicotiana tabacum HOM05D002119 ORTHO05D002209 7.4e-17 90.5 81 61.7
Duzib093G0704 Durio zibethinus HOM05D002119 ORTHO05D002209 9.7e-17 90.1 78 59.0
Thecc.08G078300 Theobroma cacao HOM05D002119 ORTHO05D002209 9.7e-17 90.1 77 58.4
FvH4_5g33710 Fragaria vesca HOM05D002119 ORTHO05D002209 1.3e-16 89.7 77 59.7
FAN08G2379 Fragaria x ananassa HOM05D002119 ORTHO05D002209 1.3e-16 89.7 77 59.7
FAN18G1236 Fragaria x ananassa HOM05D002119 ORTHO05D002209 1.3e-16 89.7 77 59.7
Nitab4.5_0008951g0030 Nicotiana tabacum HOM05D002119 ORTHO05D002209 1.3e-16 89.7 79 64.6
RcHm_v2.0_Chr7g0232721 Rosa chinensis HOM05D002119 ORTHO05D002209 1.6e-16 89.4 77 58.4
CiPaw.16G101700 Carya illinoinensis HOM05D002119 ORTHO05D002209 2.2e-16 89.0 74 59.5
FAN04G1801 Fragaria x ananassa HOM05D002119 ORTHO05D002209 2.8e-16 88.6 77 58.4
ATR0767G254 Amborella trichopoda HOM05D002119 ORTHO05D002209 4.8e-16 87.8 70 64.3
MELO3C003489.2 Cucumis melo HOM05D002119 ORTHO05D002209 6.3e-16 87.4 91 52.7
Lj1g0024990 Lotus japonicus HOM05D002119 ORTHO05D002209 1.1e-15 86.7 77 58.4
Potri.002G107400 Populus trichocarpa HOM05D002119 ORTHO05D002209 1.1e-15 86.7 88 54.5
SalBow2G0192 Salvia bowleyana HOM05D002119 ORTHO05D002209 1.1e-15 86.7 85 56.5
unitig_21.g20303 Utricularia gibba HOM05D002119 ORTHO05D002209 1.1e-15 86.7 91 57.1
CsaV3_3G048300 Cucumis sativus L. HOM05D002119 ORTHO05D002209 1.4e-15 86.3 91 52.7
Gohir.A01G125300 Gossypium hirsutum HOM05D002119 ORTHO05D002209 1.4e-15 86.3 77 54.5
Gohir.D01G112900 Gossypium hirsutum HOM05D002119 ORTHO05D002209 1.4e-15 86.3 77 54.5
Gorai.002G137700 Gossypium raimondii HOM05D002119 ORTHO05D002209 1.4e-15 86.3 77 54.5
Sc02g0008370 Simmondsia chinensis HOM05D002119 ORTHO05D002209 2.4e-15 85.5 91 53.8
Aqoxy6G00614 Aquilegia oxysepala HOM05D002119 ORTHO05D002209 3.1e-15 85.1 76 52.6
Cfa020695 Carpinus fangiana HOM05D002119 ORTHO05D002209 4.1e-15 84.7 71 62.0
Duzib116G0527 Durio zibethinus HOM05D002119 ORTHO05D002209 4.1e-15 84.7 77 57.1
TWI12G1107 Tripterygium wilfordii HOM05D002119 ORTHO05D002209 4.1e-15 84.7 74 55.4
Sabra02G0084400 Salix brachista HOM05D002119 ORTHO05D002209 5.3e-15 84.3 74 54.1
Sed0001338 Sechium edule HOM05D002119 ORTHO05D002209 5.3e-15 84.3 91 51.6
Ca_15549_v3 Cicer arietinum L. HOM05D002119 ORTHO05D002209 9.0e-15 83.6 77 55.8
Medtr3g111090 Medicago truncatula HOM05D002119 ORTHO05D002209 9.0e-15 83.6 77 55.8
Solyc04g076910.3 Solanum lycopersicum HOM05D002119 ORTHO05D002209 1.2e-14 83.2 77 61.0
Cc10_g08130 Coffea canephora HOM05D002119 ORTHO05D002209 2.6e-14 82.0 76 56.6
Gohir.A05G215400 Gossypium hirsutum HOM05D002119 ORTHO05D002209 2.6e-14 82.0 88 48.9
CDE01G0414 Ceratophyllum demersum HOM05D002119 ORTHO05D002209 3.4e-14 81.6 73 56.2
Glyma.06G091300 Glycine max HOM05D002119 ORTHO05D002209 3.4e-14 81.6 77 54.5
CAN.G723.32 Capsicum annuum HOM05D002119 ORTHO05D002209 4.5e-14 81.3 79 57.0
Phvul.009G146300 Phaseolus vulgaris HOM05D002119 ORTHO05D002209 4.5e-14 81.3 75 56.0
VMungo1309G2894 Vigna mungo HOM05D002119 ORTHO05D002209 5.9e-14 80.9 75 56.0
PSO675G0800 Papaver somniferum HOM05D002119 ORTHO05D002209 1.0e-13 80.1 74 59.5
PSO675G0847 Papaver somniferum HOM05D002119 ORTHO05D002209 1.0e-13 80.1 74 56.8
PGR031G0226 Punica granatum HOM05D002119 ORTHO05D002209 1.3e-13 79.7 72 56.9
Sp1g23810 Schrenkiella parvula HOM05D002119 ORTHO05D002209 2.2e-13 79.0 91 50.5
Psat5g017960 Pisum sativum HOM05D002119 ORTHO05D002209 2.9e-13 78.6 77 54.5
Sopen04g030560 Solanum pennellii HOM05D002119 ORTHO05D002209 2.9e-13 78.6 77 58.4
EL10Ac1g02223 Beta vulgaris HOM05D002119 ORTHO05D002209 3.8e-13 78.2 91 48.4
Glyma.04G089400 Glycine max HOM05D002119 ORTHO05D002209 3.8e-13 78.2 77 53.2
Lalb_Chr08g0242721 Lupinus albus HOM05D002119 ORTHO05D002209 3.8e-13 78.2 77 54.5
A09p38460 Brassica napus HOM05D002119 ORTHO05D002209 5.0e-13 77.8 86 52.3
BraA09t39354Z Brassica rapa HOM05D002119 ORTHO05D002209 5.0e-13 77.8 86 52.3
Thhalv10006574m.g Eutrema salsugineum HOM05D002119 ORTHO05D002209 5.0e-13 77.8 91 50.5
AT1G27595 Arabidopsis thaliana HOM05D002119 ORTHO05D002209 6.5e-13 77.4 91 47.3
arahy.Tifrunner.gnm1.ann1.JKCM11 Arachis hypogaea HOM05D002119 ORTHO05D002209 6.5e-13 77.4 75 54.7
arahy.Tifrunner.gnm1.ann1.P626UD Arachis hypogaea HOM05D002119 ORTHO05D002209 6.5e-13 77.4 75 54.7
AL1G41030 Arabidopsis lyrata HOM05D002119 ORTHO05D002209 8.5e-13 77.0 91 45.1
AUR62041883 Chenopodium quinoa HOM05D002119 ORTHO05D002209 8.5e-13 77.0 91 46.2
THA.LOC104799842 Tarenaya hassleriana HOM05D002119 ORTHO05D002209 1.1e-12 76.6 86 48.8
Ah.01g001880 Amaranthus hybridus HOM05D002119 ORTHO05D002209 1.4e-12 76.3 91 47.3
TPR.G12323 Trifolium pratense HOM05D002119 ORTHO05D002209 1.4e-12 76.3 75 56.0
HPP92_023652 Vanilla planifolia HOM05D002119 ORTHO05D002209 1.4e-12 76.3 88 48.9
BcaC01g01600 Brassica carinata HOM05D002119 ORTHO05D002209 1.9e-12 75.9 91 47.3
C03p74250 Brassica napus HOM05D002119 ORTHO05D002209 1.9e-12 75.9 91 47.3
BolC3t19683H Brassica oleracea HOM05D002119 ORTHO05D002209 1.9e-12 75.9 91 47.3
Lalb_Chr11g0064761 Lupinus albus HOM05D002119 ORTHO05D002209 1.9e-12 75.9 77 54.5
THA.LOC104825811 Tarenaya hassleriana HOM05D002119 ORTHO05D002209 1.9e-12 75.9 92 44.6
Aa31LG7G10110 Aethionema arabicum HOM05D002119 ORTHO05D002209 2.5e-12 75.5 91 47.3
Cpa.g.sc366.1 Carica papaya HOM05D002119 ORTHO05D002209 3.2e-12 75.1 78 52.6
BcaC05g26755 Brassica carinata HOM05D002119 ORTHO05D002209 4.2e-12 74.7 86 51.2
BcaC01g06943 Brassica carinata HOM05D002119 ORTHO05D002209 5.5e-12 74.3 91 48.4
BcaC05g26572 Brassica carinata HOM05D002119 ORTHO05D002209 5.5e-12 74.3 86 51.2
C05p26230 Brassica napus HOM05D002119 ORTHO05D002209 5.5e-12 74.3 86 51.2
BolC5t31336H Brassica oleracea HOM05D002119 ORTHO05D002209 5.5e-12 74.3 86 51.2
Carub.0001s2611 Capsella rubella HOM05D002119 ORTHO05D002209 5.5e-12 74.3 91 45.1
BraA08t34571Z Brassica rapa HOM05D002119 ORTHO05D002209 7.2e-12 73.9 91 47.3
A08p26200 Brassica napus HOM05D002119 ORTHO05D002209 9.4e-12 73.6 86 48.8
SGA_v2.0_scaffold28G11865 Striga asiatica HOM05D002119 ORTHO05D002209 1.2e-11 73.2 77 55.8
PSO675G0158 Papaver somniferum HOM05D002119 ORTHO05D002209 2.7e-11 72.0 74 51.4
Haze_19002 Corylus avellana HOM05D002119 ORTHO05D002209 3.6e-11 71.6 98 44.9
Hund05234 Selenicereus undatus HOM05D002119 ORTHO05D002209 1.0e-10 70.1 75 50.7
AUR62035395 Chenopodium quinoa HOM05D002119 ORTHO05D002209 3.9e-10 68.2 75 48.0
ClCG11G014870 Citrullus lanatus HOM05D002119 ORTHO05D002209 3.9e-10 68.2 75 50.7
FAN15G1430 Fragaria x ananassa HOM05D002119 ORTHO05D002209 1.3e-08 63.2 95 42.1
Lj1C1165G2 Lonicera japonica HOM05D002119 ORTHO05D002209 2.2e-08 62.4 77 48.1
Pp3c2_10640 Physcomitrium patens HOM05D002119 ORTHO05D002209 2.2e-08 62.4 72 45.8
Eucgr.F02176 Eucalyptus grandis HOM05D002119 ORTHO05D002209 2.8e-08 62.0 69 50.7
Mapoly0035s0121 Marchantia polymorpha HOM05D002119 ORTHO05D002209 5.3e-07 57.8 75 42.7
SEGI_29268 Sequoiadendron giganteum HOM05D002119 ORTHO05D002209 9.1e-07 57.0 74 47.3


User provided reference genes

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