Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu018643.1 Olea europaea HOM05D000239 ORTHO05D016857 5.2e-54 214.5 144 100.0
Oeu047115.2 Olea europaea HOM05D000239 ORTHO05D000484 1.7e-36 156.4 141 84.4
MSTRG.14053 Avicennia marina HOM05D000239 ORTHO05D000484 9.6e-24 114.0 142 56.3
SGA_v2.0_scaffold163G38032 Striga asiatica HOM05D000239 ORTHO05D000484 3.5e-18 95.5 148 45.3
Migut.A00137 Erythranthe guttata HOM05D000239 ORTHO05D000484 2.3e-17 92.8 146 45.2
SGA_v2.0_scaffold169G38692 Striga asiatica HOM05D000239 ORTHO05D000484 5.6e-16 88.2 142 41.5
Dinv27983 Davidia involucrata HOM05D000239 ORTHO05D000484 1.6e-15 86.7 150 40.7
MSTRG.1681 Avicennia marina HOM05D000239 ORTHO05D000484 2.8e-15 85.9 143 60.8
Oeu008356.2 Olea europaea HOM05D000239 ORTHO05D016857 2.4e-14 82.8 142 45.1
Migut.E01565 Erythranthe guttata HOM05D000239 ORTHO05D000484 4.0e-14 82.0 142 41.5
SalBow4G0545 Salvia bowleyana HOM05D000239 ORTHO05D000484 4.5e-13 78.6 145 62.8
Dinv22900 Davidia involucrata HOM05D000239 ORTHO05D000484 2.9e-12 75.9 152 38.8
Sopen08g018850 Solanum pennellii HOM05D000239 ORTHO05D000484 1.2e-10 70.5 151 35.1
PGSC0003DMG400029939 Solanum tuberosum HOM05D000239 ORTHO05D016857 1.2e-10 70.5 143 37.1
Lsat_1_v5_gn_5_48361 Lactuca sativa HOM05D000239 ORTHO05D000484 1.6e-10 70.1 143 58.0
CSS0034686 Camellia sinensis var. sinensis HOM05D000239 ORTHO05D000484 2.7e-10 69.3 47 63.8
HanXRQChr06g0173851 Helianthus annuus HOM05D000239 ORTHO05D000484 2.7e-10 69.3 146 36.3
CiPaw.15G039100 Carya illinoinensis HOM05D000239 ORTHO05D000484 4.6e-10 68.6 156 52.6
Sc06g0000960 Simmondsia chinensis HOM05D000239 ORTHO05D000484 4.6e-10 68.6 146 39.7
Solyc08g065230.1 Solanum lycopersicum HOM05D000239 ORTHO05D016857 6.0e-10 68.2 143 36.4
GSVIVG01035409001 Vitis vinifera HOM05D000239 ORTHO05D000484 6.0e-10 68.2 150 36.7
CSS0005070 Camellia sinensis var. sinensis HOM05D000239 ORTHO05D000484 1.8e-09 66.6 47 63.8
CSS0047895 Camellia sinensis var. sinensis HOM05D000239 ORTHO05D000484 1.8e-09 66.6 47 63.8
Rhsim07G0142400 Rhododendron simsii HOM05D000239 ORTHO05D000484 2.3e-09 66.2 47 61.7
CSS0050474 Camellia sinensis var. sinensis HOM05D000239 ORTHO05D016857 8.7e-09 64.3 39 71.8
HanXRQChr03g0079091 Helianthus annuus HOM05D000239 ORTHO05D000484 1.1e-08 63.9 143 57.3
CiPaw.16G028800 Carya illinoinensis HOM05D000239 ORTHO05D000484 7.4e-08 61.2 148 33.8
Cc08_g10580 Coffea canephora HOM05D000239 ORTHO05D000484 7.4e-08 61.2 46 63.0
Hma1.2p1_0450F.1_g155536 Hydrangea macrophylla HOM05D000239 ORTHO05D000484 1.3e-07 60.5 144 33.3
Hma1.2p1_0450F.1_g155560 Hydrangea macrophylla HOM05D000239 ORTHO05D000484 1.3e-07 60.5 144 33.3
TWI32G0009 Tripterygium wilfordii HOM05D000239 ORTHO05D000484 1.3e-07 60.5 148 32.4
Nitab4.5_0003627g0050 Nicotiana tabacum HOM05D000239 ORTHO05D016857 1.6e-07 60.1 39 66.7
Nitab4.5_0005860g0040 Nicotiana tabacum HOM05D000239 ORTHO05D016857 1.6e-07 60.1 39 66.7
DCAR_004427 Daucus carota HOM05D000239 ORTHO05D000484 2.8e-07 59.3 157 33.8
Lj7C272T1 Lonicera japonica HOM05D000239 ORTHO05D000484 2.8e-07 59.3 45 60.0
Lj7C275G7 Lonicera japonica HOM05D000239 ORTHO05D000484 2.8e-07 59.3 45 60.0
MBI01_g09954_MAGBIO Magnolia biondii HOM05D000239 ORTHO05D000484 3.7e-07 58.9 47 57.4
MD08G1061200 Malus domestica HOM05D000239 ORTHO05D000484 3.7e-07 58.9 155 52.3
AT5G11850 Arabidopsis thaliana HOM05D000239 ORTHO05D000484 4.8e-07 58.5 160 34.4
Sed0014622 Sechium edule HOM05D000239 ORTHO05D000484 4.8e-07 58.5 147 32.7
TWI34G0580 Tripterygium wilfordii HOM05D000239 ORTHO05D000484 4.8e-07 58.5 148 31.1
BraA03t09862Z Brassica rapa HOM05D000239 ORTHO05D000484 6.2e-07 58.2 158 32.9
CAN.G42.1 Capsicum annuum HOM05D000239 ORTHO05D000484 6.2e-07 58.2 164 48.2
Cpa.g.sc7.171 Carica papaya HOM05D000239 ORTHO05D000484 6.2e-07 58.2 157 34.4
ECA240G4122 Erigeron canadensis HOM05D000239 ORTHO05D000484 8.1e-07 57.8 40 62.5
C03p06020 Brassica napus HOM05D000239 ORTHO05D000484 1.1e-06 57.4 158 32.9
Potri.018G053800 Populus trichocarpa HOM05D000239 ORTHO05D000484 1.1e-06 57.4 147 34.0
Hund19454 Selenicereus undatus HOM05D000239 ORTHO05D000484 1.1e-06 57.4 149 32.9
FAN24G0456 Fragaria x ananassa HOM05D000239 ORTHO05D000484 1.4e-06 57.0 149 54.4
MD15G1060300 Malus domestica HOM05D000239 ORTHO05D000484 1.8e-06 56.6 149 52.3
Sed0022080 Sechium edule HOM05D000239 ORTHO05D000484 1.8e-06 56.6 51 52.9
FvH4_2g31950 Fragaria vesca HOM05D000239 ORTHO05D000484 2.4e-06 56.2 149 53.7
FAN15G2438 Fragaria x ananassa HOM05D000239 ORTHO05D000484 2.4e-06 56.2 149 53.7
Cfa017952 Carpinus fangiana HOM05D000239 ORTHO05D000484 3.1e-06 55.8 49 53.1
Sabra06G0177900 Salix brachista HOM05D000239 ORTHO05D000484 3.1e-06 55.8 154 34.4
Atru.chr7.1060 Acer truncatum HOM05D000239 ORTHO05D000484 4.0e-06 55.5 166 32.5
MELO3C016868.2 Cucumis melo HOM05D000239 ORTHO05D000484 5.3e-06 55.1 51 51.0
Aqoxy7G01227 Aquilegia oxysepala HOM05D000239 ORTHO05D000484 6.9e-06 54.7 53 54.7
A03p05220 Brassica napus HOM05D000239 ORTHO05D000484 6.9e-06 54.7 158 32.3
Sabra18G0049100 Salix brachista HOM05D000239 ORTHO05D000484 9.0e-06 54.3 148 33.8


User provided reference genes

Program Settings