Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu018601.1 Olea europaea HOM05D001361 ORTHO05D002529 3.6e-97 358.2 179 100.0
SGA_v2.0_scaffold65G22146 Striga asiatica HOM05D001361 ORTHO05D002529 9.7e-42 174.1 148 59.5
SalBow2G0873 Salvia bowleyana HOM05D001361 ORTHO05D002529 8.2e-41 171.0 138 64.5
Hma1.2p1_0133F.1_g060860 Hydrangea macrophylla HOM05D001361 ORTHO05D002529 4.2e-37 158.7 143 56.6
Migut.E00542 Erythranthe guttata HOM05D001361 ORTHO05D002529 1.6e-36 156.8 141 60.3
Nitab4.5_0002367g0070 Nicotiana tabacum HOM05D001361 ORTHO05D002529 1.0e-35 154.1 140 57.9
Peaxi162Scf00074g00056 Petunia axillaris HOM05D001361 ORTHO05D002529 3.9e-35 152.1 140 56.4
Dinv08702 Davidia involucrata HOM05D001361 ORTHO05D002529 1.5e-34 150.2 140 54.3
Nitab4.5_0002793g0060 Nicotiana tabacum HOM05D001361 ORTHO05D002529 3.3e-34 149.1 140 56.4
PGSC0003DMG400012257 Solanum tuberosum HOM05D001361 ORTHO05D002529 1.7e-33 146.7 140 55.7
CSS0043997 Camellia sinensis var. sinensis HOM05D001361 ORTHO05D002529 2.2e-33 146.4 141 53.9
Sopen08g030960 Solanum pennellii HOM05D001361 ORTHO05D002529 3.7e-33 145.6 140 55.0
Solyc08g082730.4 Solanum lycopersicum HOM05D001361 ORTHO05D002529 4.8e-33 145.2 140 55.0
Lj1C785T7 Lonicera japonica HOM05D001361 ORTHO05D002529 4.1e-32 142.1 140 52.1
TWI75G0070 Tripterygium wilfordii HOM05D001361 ORTHO05D002529 1.5e-31 140.2 141 48.9
Thecc.01G187300 Theobroma cacao HOM05D001361 ORTHO05D002529 2.6e-31 139.4 146 50.7
PGR042G3486 Punica granatum HOM05D001361 ORTHO05D002529 4.5e-31 138.7 139 50.4
CSS0006201 Camellia sinensis var. sinensis HOM05D001361 ORTHO05D002529 5.9e-31 138.3 141 51.8
Sc05g0006270 Simmondsia chinensis HOM05D001361 ORTHO05D002529 1.7e-30 136.7 142 50.7
vmacro09375 Vaccinium macrocarpon HOM05D001361 ORTHO05D002529 1.7e-30 136.7 141 51.1
Manes.12G056000 Manihot esculenta HOM05D001361 ORTHO05D002529 2.9e-30 136.0 138 50.7
Gohir.D11G158600 Gossypium hirsutum HOM05D001361 ORTHO05D002529 5.0e-30 135.2 141 50.4
HanXRQChr14g0429251 Helianthus annuus HOM05D001361 ORTHO05D002529 8.5e-30 134.4 146 49.3
MD17G1108700 Malus domestica HOM05D001361 ORTHO05D002529 8.5e-30 134.4 149 47.7
CAN.G567.33 Capsicum annuum HOM05D001361 ORTHO05D002529 1.1e-29 134.0 166 49.4
Gohir.A11G151600 Gossypium hirsutum HOM05D001361 ORTHO05D002529 1.9e-29 133.3 141 49.6
Potri.002G219300 Populus trichocarpa HOM05D001361 ORTHO05D002529 1.9e-29 133.3 147 48.3
RcHm_v2.0_Chr2g0157541 Rosa chinensis HOM05D001361 ORTHO05D002529 1.9e-29 133.3 144 47.2
Duzib138G1844 Durio zibethinus HOM05D001361 ORTHO05D002529 2.5e-29 132.9 147 48.3
AUR62017563 Chenopodium quinoa HOM05D001361 ORTHO05D002529 5.5e-29 131.7 138 52.2
AUR62015102 Chenopodium quinoa HOM05D001361 ORTHO05D002529 9.4e-29 131.0 138 52.2
unitig_22.g5611 Utricularia gibba HOM05D001361 ORTHO05D002529 9.4e-29 131.0 146 51.4
Lsat_1_v5_gn_9_105360 Lactuca sativa HOM05D001361 ORTHO05D002529 1.6e-28 130.2 141 51.8
DCAR_019734 Daucus carota HOM05D001361 ORTHO05D002529 2.7e-28 129.4 140 47.9
FAN14G2423 Fragaria x ananassa HOM05D001361 ORTHO05D002529 2.7e-28 129.4 150 44.7
Sabra14G0122500 Salix brachista HOM05D001361 ORTHO05D002529 8.0e-28 127.9 140 48.6
GSVIVG01030540001 Vitis vinifera HOM05D001361 ORTHO05D002529 1.0e-27 127.5 141 48.9
CiPaw.03G274500 Carya illinoinensis HOM05D001361 ORTHO05D002529 1.8e-27 126.7 141 46.8
QL08p029756 Quercus lobata HOM05D001361 ORTHO05D002529 2.3e-27 126.3 135 50.4
Nn1g07359 Nelumbo nucifera HOM05D001361 ORTHO05D002529 3.0e-27 125.9 141 54.6
Rhsim04G0046400 Rhododendron simsii HOM05D001361 ORTHO05D002529 3.0e-27 125.9 174 43.1
EL10Ac9g22785 Beta vulgaris HOM05D001361 ORTHO05D002529 6.7e-27 124.8 140 49.3
Aqoxy1G02844 Aquilegia oxysepala HOM05D001361 ORTHO05D002529 1.5e-26 123.6 136 51.5
Aqoxy261s001 Aquilegia oxysepala HOM05D001361 ORTHO05D002529 1.5e-26 123.6 136 51.5
TAR629G2435 Trochodendron aralioides HOM05D001361 ORTHO05D002529 1.5e-26 123.6 162 43.8
Potri.014G160800 Populus trichocarpa HOM05D001361 ORTHO05D002529 4.4e-26 122.1 140 47.9
Gorai.007G169000 Gossypium raimondii HOM05D001361 ORTHO05D002529 1.3e-25 120.6 169 41.4
COL.COLO4_05389 Corchorus olitorius HOM05D001361 ORTHO05D002529 3.7e-25 119.0 141 46.1
ECA240G0476 Erigeron canadensis HOM05D001361 ORTHO05D002529 1.2e-23 114.0 105 56.2
FvH4_6g41750 Fragaria vesca HOM05D001361 ORTHO05D002529 2.0e-23 113.2 150 40.7
CsaV3_2G034350 Cucumis sativus L. HOM05D001361 ORTHO05D002529 2.2e-22 109.8 141 41.8
PSO541G2939 Papaver somniferum HOM05D001361 ORTHO05D002529 2.9e-22 109.4 145 42.1
ClCG02G009670 Citrullus lanatus HOM05D001361 ORTHO05D002529 6.5e-22 108.2 141 41.8
THA.LOC104801014 Tarenaya hassleriana HOM05D001361 ORTHO05D002529 6.5e-22 108.2 149 40.9
PSO675G6158 Papaver somniferum HOM05D001361 ORTHO05D002529 8.5e-22 107.8 139 43.2
MELO3C019349.2 Cucumis melo HOM05D001361 ORTHO05D002529 1.1e-21 107.5 141 41.8
FAN09G0446 Fragaria x ananassa HOM05D001361 ORTHO05D002529 1.5e-21 107.1 150 39.3
Eucgr.A01083 Eucalyptus grandis HOM05D001361 ORTHO05D002529 1.9e-21 106.7 148 43.2
Lalb_Chr14g0362551 Lupinus albus HOM05D001361 ORTHO05D002529 3.2e-21 105.9 151 43.0
FAN05G2080 Fragaria x ananassa HOM05D001361 ORTHO05D002529 5.5e-21 105.1 150 39.3
Haze_12741 Corylus avellana HOM05D001361 ORTHO05D002529 9.4e-21 104.4 133 44.4
Phvul.L003137 Phaseolus vulgaris HOM05D001361 ORTHO05D002529 4.7e-20 102.1 154 41.6
CANSAT64G0039 Cannabis sativa HOM05D001361 ORTHO05D002529 1.4e-19 100.5 142 40.8
Carub.0001s0420 Capsella rubella HOM05D001361 ORTHO05D002529 6.8e-19 98.2 143 38.5
Aa31LG1G20040 Aethionema arabicum HOM05D001361 ORTHO05D002529 8.8e-19 97.8 150 37.3
TAR629G2015 Trochodendron aralioides HOM05D001361 ORTHO05D002529 8.8e-19 97.8 157 39.5
VMungo0540G1276 Vigna mungo HOM05D001361 ORTHO05D002529 1.2e-18 97.4 155 41.9
AL1G14690 Arabidopsis lyrata HOM05D001361 ORTHO05D002529 5.7e-18 95.1 143 37.8
AT1G04960 Arabidopsis thaliana HOM05D001361 ORTHO05D002529 7.5e-18 94.7 143 38.5
Thhalv10008218m.g Eutrema salsugineum HOM05D001361 ORTHO05D002529 9.8e-18 94.4 146 38.4
BraA10t42615Z Brassica rapa HOM05D001361 ORTHO05D002529 1.3e-17 94.0 143 38.5
C05p03110 Brassica napus HOM05D001361 ORTHO05D002529 2.2e-17 93.2 143 37.8
BolC5t29093H Brassica oleracea HOM05D001361 ORTHO05D002529 2.2e-17 93.2 143 37.8
CARHR004370 Cardamine hirsuta HOM05D001361 ORTHO05D002529 2.2e-17 93.2 145 35.2
A10p03390 Brassica napus HOM05D001361 ORTHO05D002529 2.8e-17 92.8 143 37.8
Ca_16351_v3 Cicer arietinum L. HOM05D001361 ORTHO05D002529 2.8e-17 92.8 152 36.2
Psat5g103960 Pisum sativum HOM05D001361 ORTHO05D002529 4.8e-17 92.0 141 37.6
Prupe.3G206300 Prunus persica HOM05D001361 ORTHO05D002529 4.8e-17 92.0 68 60.3
ATR1101G011 Amborella trichopoda HOM05D001361 ORTHO05D002529 8.3e-17 91.3 141 44.0
Sp1g03810 Schrenkiella parvula HOM05D001361 ORTHO05D002529 8.3e-17 91.3 144 35.4
Sabra02G0170900 Salix brachista HOM05D001361 ORTHO05D002529 1.8e-16 90.1 168 36.3
MBI16_g41623_MAGBIO Magnolia biondii HOM05D001361 ORTHO05D002529 2.4e-16 89.7 135 43.0
Os09g0482740 Oryza sativa ssp. japonica HOM05D001361 ORTHO05D002529 3.5e-15 85.9 123 41.5
Zm00001eb316450 Zea mays HOM05D001361 ORTHO05D002529 2.2e-14 83.2 128 37.5
TPR.G22467 Trifolium pratense HOM05D001361 ORTHO05D002529 3.8e-14 82.4 146 37.0
Sed0022061 Sechium edule HOM05D001361 ORTHO05D002529 1.5e-13 80.5 137 35.8
Ciclev10018308m.g Citrus clementina HOM05D001361 ORTHO05D002529 5.2e-11 72.0 114 36.0
HanXRQChr17g0538121 Helianthus annuus HOM05D001361 ORTHO05D002529 8.8e-11 71.2 113 38.9
Nn4g23060 Nelumbo nucifera HOM05D001361 ORTHO05D002529 2.2e-09 66.6 104 39.4
Lsat_1_v5_gn_6_3540 Lactuca sativa HOM05D001361 ORTHO05D002529 2.8e-09 66.2 64 48.4
ECA246G4804 Erigeron canadensis HOM05D001361 ORTHO05D006173 4.9e-09 65.5 62 50.0
CDE09G0127 Ceratophyllum demersum HOM05D001361 ORTHO05D002529 6.3e-09 65.1 108 37.0
Medtr3g082850 Medicago truncatula HOM05D001361 ORTHO05D002529 6.3e-09 65.1 158 29.1
TAR629G0132 Trochodendron aralioides HOM05D001361 ORTHO05D002529 8.3e-09 64.7 136 34.6
Lsat_1_v5_gn_3_19241 Lactuca sativa HOM05D001361 ORTHO05D002529 1.1e-08 64.3 62 48.4
CDE02G3302 Ceratophyllum demersum HOM05D001361 ORTHO05D002529 1.4e-08 63.9 125 34.4
Aqoxy3G03283 Aquilegia oxysepala HOM05D001361 ORTHO05D002529 2.4e-08 63.2 116 36.2
DCAR_028265 Daucus carota HOM05D001361 ORTHO05D002529 3.1e-08 62.8 95 36.8
Rhsim12G0057700 Rhododendron simsii HOM05D001361 ORTHO05D002529 5.4e-08 62.0 55 52.7
PGSC0003DMG400023309 Solanum tuberosum HOM05D001361 ORTHO05D002529 5.4e-08 62.0 78 43.6
Nitab4.5_0000411g0040 Nicotiana tabacum HOM05D001361 ORTHO05D002529 7.0e-08 61.6 84 40.5
Nitab4.5_0000834g0010 Nicotiana tabacum HOM05D001361 ORTHO05D002529 7.0e-08 61.6 84 40.5
Hund02280 Selenicereus undatus HOM05D001361 ORTHO05D010615 9.1e-08 61.2 46 60.9
MBI04_g10405_MAGBIO Magnolia biondii HOM05D001361 ORTHO05D002529 1.2e-07 60.8 60 50.0
vmacro01232 Vaccinium macrocarpon HOM05D001361 ORTHO05D002529 1.2e-07 60.8 55 52.7
Duzib251G0880 Durio zibethinus HOM05D001361 ORTHO05D002529 2.0e-07 60.1 89 40.4
Peaxi162Scf00456g00212 Petunia axillaris HOM05D001361 ORTHO05D002529 2.0e-07 60.1 76 43.4
CAN.G137.6 Capsicum annuum HOM05D001361 ORTHO05D002529 2.7e-07 59.7 76 40.8
Oeu017067.2 Olea europaea HOM05D001361 ORTHO05D002529 2.7e-07 59.7 99 33.3
TAR371G0316 Trochodendron aralioides HOM05D001361 ORTHO05D002529 2.7e-07 59.7 74 44.6
MSTRG.12169 Avicennia marina HOM05D001361 ORTHO05D002529 3.5e-07 59.3 114 32.5
Dinv44088 Davidia involucrata HOM05D001361 ORTHO05D002529 3.5e-07 59.3 99 39.4
Gohir.A12G166300 Gossypium hirsutum HOM05D001361 ORTHO05D002529 4.5e-07 58.9 95 40.0
FAN02G3926 Fragaria x ananassa HOM05D001361 ORTHO05D002529 5.9e-07 58.5 99 37.4
Hma1.2p1_0341F.1_g130600 Hydrangea macrophylla HOM05D001361 ORTHO05D002529 5.9e-07 58.5 51 52.9
CSS0049047 Camellia sinensis var. sinensis HOM05D001361 ORTHO05D002529 7.7e-07 58.2 54 50.0
Dinv43649 Davidia involucrata HOM05D001361 ORTHO05D002529 7.7e-07 58.2 54 50.0
CSS0020990 Camellia sinensis var. sinensis HOM05D001361 ORTHO05D002529 1.0e-06 57.8 54 50.0
Migut.A01170 Erythranthe guttata HOM05D001361 ORTHO05D002529 1.0e-06 57.8 63 44.4
Gohir.A13G072100 Gossypium hirsutum HOM05D001361 ORTHO05D002529 1.0e-06 57.8 79 41.8
Gohir.D13G067800 Gossypium hirsutum HOM05D001361 ORTHO05D002529 1.0e-06 57.8 79 41.8
Gorai.013G077300 Gossypium raimondii HOM05D001361 ORTHO05D002529 1.0e-06 57.8 79 41.8
Gohir.D12G169800 Gossypium hirsutum HOM05D001361 ORTHO05D002529 1.3e-06 57.4 61 45.9
Gorai.008G182400 Gossypium raimondii HOM05D001361 ORTHO05D002529 1.3e-06 57.4 61 45.9
Solyc08g005230.3 Solanum lycopersicum HOM05D001361 ORTHO05D002529 1.3e-06 57.4 84 38.1
Cfa009024 Carpinus fangiana HOM05D001361 ORTHO05D002529 1.7e-06 57.0 136 30.1
COL.COLO4_23041 Corchorus olitorius HOM05D001361 ORTHO05D002529 1.7e-06 57.0 98 36.7
Thecc.02G354100 Theobroma cacao HOM05D001361 ORTHO05D002529 1.7e-06 57.0 58 46.6
DCAR_004275 Daucus carota HOM05D001361 ORTHO05D002529 2.9e-06 56.2 73 41.1
Migut.E00752 Erythranthe guttata HOM05D001361 ORTHO05D002529 2.9e-06 56.2 54 46.3
Sopen08g001260 Solanum pennellii HOM05D001361 ORTHO05D002529 2.9e-06 56.2 55 45.5
MSTRG.24843 Avicennia marina HOM05D001361 ORTHO05D002529 3.8e-06 55.8 54 44.4
Sed0011652 Sechium edule HOM05D001361 ORTHO05D002529 3.8e-06 55.8 146 25.3
CSS0025195 Camellia sinensis var. sinensis HOM05D001361 ORTHO05D002529 5.0e-06 55.5 63 42.9
Rhsim12G0130400 Rhododendron simsii HOM05D001361 ORTHO05D002529 5.0e-06 55.5 62 41.9
ClCG01G018850 Citrullus lanatus HOM05D001361 ORTHO05D002529 6.6e-06 55.1 93 34.4
CsaV3_6G045510 Cucumis sativus L. HOM05D001361 ORTHO05D002529 8.6e-06 54.7 89 36.0


User provided reference genes

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