Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu018599.1 Olea europaea HOM05D000049 ORTHO05D008785 7.0e-90 334.0 172 100.0
Oeu010393.1 Olea europaea HOM05D000049 ORTHO05D008785 1.3e-51 206.8 172 69.2
Solyc01g107660.3 Solanum lycopersicum HOM05D000049 ORTHO05D008785 1.5e-36 156.8 175 56.0
Nitab4.5_0002815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D008785 2.6e-36 156.0 173 56.6
Cc02_g19180 Coffea canephora HOM05D000049 ORTHO05D008785 1.7e-35 153.3 176 54.5
PGSC0003DMG400025866 Solanum tuberosum HOM05D000049 ORTHO05D008785 2.2e-35 152.9 173 55.5
Nitab4.5_0005392g0020 Nicotiana tabacum HOM05D000049 ORTHO05D008785 3.8e-35 152.1 175 57.1
SalBow3G3686 Salvia bowleyana HOM05D000049 ORTHO05D008785 4.9e-35 151.8 166 57.2
Nn1g04714 Nelumbo nucifera HOM05D000049 ORTHO05D008785 1.1e-34 150.6 116 71.6
Migut.B00381 Erythranthe guttata HOM05D000049 ORTHO05D008785 1.9e-34 149.8 175 54.9
CAN.G1231.12 Capsicum annuum HOM05D000049 ORTHO05D008785 9.3e-34 147.5 173 56.1
Hma1.2p1_0796F.1_g219130 Hydrangea macrophylla HOM05D000049 ORTHO05D008785 9.3e-34 147.5 177 55.4
Glyma.10G263000 Glycine max HOM05D000049 ORTHO05D008785 1.2e-33 147.1 95 82.1
Peaxi162Scf00016g02238 Petunia axillaris HOM05D000049 ORTHO05D008785 2.1e-33 146.4 173 54.3
Duzib248G1051 Durio zibethinus HOM05D000049 ORTHO05D008785 3.5e-33 145.6 88 85.2
Migut.N01171 Erythranthe guttata HOM05D000049 ORTHO05D008785 3.5e-33 145.6 175 55.4
GSVIVG01003167001 Vitis vinifera HOM05D000049 ORTHO05D008785 4.6e-33 145.2 87 87.4
CiPaw.05G010600 Carya illinoinensis HOM05D000049 ORTHO05D008785 6.0e-33 144.8 97 77.3
Aqoxy5G01153 Aquilegia oxysepala HOM05D000049 ORTHO05D008785 7.9e-33 144.4 122 63.1
Duzib132G0396 Durio zibethinus HOM05D000049 ORTHO05D008785 7.9e-33 144.4 86 84.9
Glyma.20G127500 Glycine max HOM05D000049 ORTHO05D008785 1.0e-32 144.1 95 80.0
Thecc.02G106900 Theobroma cacao HOM05D000049 ORTHO05D008785 1.3e-32 143.7 176 54.0
Cpa.g.sc106.84 Carica papaya HOM05D000049 ORTHO05D008785 1.8e-32 143.3 177 53.1
Ciclev10029534m.g Citrus clementina HOM05D000049 ORTHO05D008785 3.0e-32 142.5 174 54.6
SGA_v2.0_scaffold393G50708 Striga asiatica HOM05D000049 ORTHO05D008785 3.9e-32 142.1 171 53.2
Dinv42184 Davidia involucrata HOM05D000049 ORTHO05D008785 6.7e-32 141.4 168 54.2
Atru.chr5.2581 Acer truncatum HOM05D000049 ORTHO05D008785 8.7e-32 141.0 176 52.3
TPR.G13867 Trifolium pratense HOM05D000049 ORTHO05D008785 1.1e-31 140.6 178 50.6
Actinidia27967 Actinidia chinensis HOM05D000049 ORTHO05D008785 1.5e-31 140.2 95 75.8
Manes.02G137400 Manihot esculenta HOM05D000049 ORTHO05D008785 1.5e-31 140.2 179 52.5
CSS0023695 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 1.9e-31 139.8 175 52.6
Phvul.007G038900 Phaseolus vulgaris HOM05D000049 ORTHO05D008785 1.9e-31 139.8 95 75.8
Potri.009G096800 Populus trichocarpa HOM05D000049 ORTHO05D008785 1.9e-31 139.8 175 49.1
VMungo0720G1000 Vigna mungo HOM05D000049 ORTHO05D008785 1.9e-31 139.8 95 77.9
TWI31G0015 Tripterygium wilfordii HOM05D000049 ORTHO05D008785 3.3e-31 139.0 84 89.3
Prupe.8G134100 Prunus persica HOM05D000049 ORTHO05D008785 5.7e-31 138.3 175 54.9
Atru.chr11.1081 Acer truncatum HOM05D000049 ORTHO05D008785 7.4e-31 137.9 88 79.5
Psat6g219680 Pisum sativum HOM05D000049 ORTHO05D008785 7.4e-31 137.9 95 72.6
MSTRG.5347 Avicennia marina HOM05D000049 ORTHO05D008785 9.7e-31 137.5 170 51.8
Lalb_Chr02g0145351 Lupinus albus HOM05D000049 ORTHO05D008785 9.7e-31 137.5 95 70.5
Eucgr.H03224 Eucalyptus grandis HOM05D000049 ORTHO05D008785 1.3e-30 137.1 87 81.6
Haze_10161 Corylus avellana HOM05D000049 ORTHO05D008785 1.6e-30 136.7 179 51.4
QL11p033983 Quercus lobata HOM05D000049 ORTHO05D008785 1.6e-30 136.7 177 51.4
Gohir.A03G186700 Gossypium hirsutum HOM05D000049 ORTHO05D008785 2.8e-30 136.0 97 74.2
CANSAT25G0973 Cannabis sativa HOM05D000049 ORTHO05D008785 3.7e-30 135.6 174 53.4
FAN20G0640 Fragaria x ananassa HOM05D000049 ORTHO05D008785 4.8e-30 135.2 174 51.7
Glyma.20G129600 Glycine max HOM05D000049 ORTHO05D008785 4.8e-30 135.2 95 74.7
EL10Ac9g22295 Beta vulgaris HOM05D000049 ORTHO05D008785 6.3e-30 134.8 88 76.1
arahy.Tifrunner.gnm1.ann1.MU25MQ Arachis hypogaea HOM05D000049 ORTHO05D008785 1.1e-29 134.0 94 74.5
FvH4_2g05321 Fragaria vesca HOM05D000049 ORTHO05D008785 1.4e-29 133.7 174 51.7
HanXRQChr03g0070281 Helianthus annuus HOM05D000049 ORTHO05D008785 1.4e-29 133.7 82 84.1
Potri.001G301100 Populus trichocarpa HOM05D000049 ORTHO05D008785 1.4e-29 133.7 177 49.7
Cfa004569 Carpinus fangiana HOM05D000049 ORTHO05D008785 1.8e-29 133.3 179 50.3
MD05G1088100 Malus domestica HOM05D000049 ORTHO05D008785 1.8e-29 133.3 95 73.7
Gohir.D02G207500 Gossypium hirsutum HOM05D000049 ORTHO05D008785 2.4e-29 132.9 89 78.7
ECA240G2980 Erigeron canadensis HOM05D000049 ORTHO05D000027 3.1e-29 132.5 171 48.5
Sc08g0001450 Simmondsia chinensis HOM05D000049 ORTHO05D008785 3.1e-29 132.5 82 82.9
Lj5g0006015 Lotus japonicus HOM05D000049 ORTHO05D008785 4.1e-29 132.1 95 72.6
Hund06332 Selenicereus undatus HOM05D000049 ORTHO05D008785 5.3e-29 131.7 96 75.0
Ah.01g018130 Amaranthus hybridus HOM05D000049 ORTHO05D008785 6.9e-29 131.3 109 68.8
BcaNung03801 Brassica carinata HOM05D000049 ORTHO05D008785 9.0e-29 131.0 177 48.6
Gorai.005G235400 Gossypium raimondii HOM05D000049 ORTHO05D008785 1.2e-28 130.6 89 77.5
unitig_22.g6845 Utricularia gibba HOM05D000049 ORTHO05D008785 1.2e-28 130.6 82 81.7
RcHm_v2.0_Chr6g0255531 Rosa chinensis HOM05D000049 ORTHO05D008785 1.5e-28 130.2 174 51.1
ClCG02G006290 Citrullus lanatus HOM05D000049 ORTHO05D008785 2.0e-28 129.8 88 79.5
CsaV3_7G008250 Cucumis sativus L. HOM05D000049 ORTHO05D008785 2.0e-28 129.8 88 79.5
TAR381G1170 Trochodendron aralioides HOM05D000049 ORTHO05D008785 2.0e-28 129.8 87 77.0
CDE02G2484 Ceratophyllum demersum HOM05D000049 ORTHO05D008785 2.6e-28 129.4 95 69.5
Sed0018040 Sechium edule HOM05D000049 ORTHO05D008785 2.6e-28 129.4 82 81.7
C01p04640 Brassica napus HOM05D000049 ORTHO05D008785 3.4e-28 129.0 174 47.7
BolC1t00447H Brassica oleracea HOM05D000049 ORTHO05D008785 3.4e-28 129.0 174 47.7
CANSAT25G0620 Cannabis sativa HOM05D000049 ORTHO05D008785 4.5e-28 128.6 172 51.2
CiPaw.06G170000 Carya illinoinensis HOM05D000049 ORTHO05D008785 4.5e-28 128.6 97 72.2
Sabra16G0189300 Salix brachista HOM05D000049 ORTHO05D008785 4.5e-28 128.6 88 75.0
Aa31LG2G16660 Aethionema arabicum HOM05D000049 ORTHO05D008785 1.3e-27 127.1 101 68.3
arahy.Tifrunner.gnm1.ann1.KJA62A Arachis hypogaea HOM05D000049 ORTHO05D008785 1.3e-27 127.1 93 74.2
A01p04250 Brassica napus HOM05D000049 ORTHO05D008785 2.2e-27 126.3 101 67.3
BraA01t00414Z Brassica rapa HOM05D000049 ORTHO05D008785 2.2e-27 126.3 101 67.3
AL7G17120 Arabidopsis lyrata HOM05D000049 ORTHO05D008785 2.9e-27 125.9 175 46.9
AUR62039109 Chenopodium quinoa HOM05D000049 ORTHO05D008785 5.0e-27 125.2 82 78.0
PGR042G1228 Punica granatum HOM05D000049 ORTHO05D008785 5.0e-27 125.2 88 76.1
THA.LOC104819560 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 6.5e-27 124.8 81 77.8
DCAR_030806 Daucus carota HOM05D000049 ORTHO05D008785 1.1e-26 124.0 88 68.2
AUR62010281 Chenopodium quinoa HOM05D000049 ORTHO05D008785 1.4e-26 123.6 95 67.4
Sp7g31960 Schrenkiella parvula HOM05D000049 ORTHO05D008785 1.9e-26 123.2 177 45.2
AT4G34190 Arabidopsis thaliana HOM05D000049 ORTHO05D008785 5.5e-26 121.7 172 47.7
Carub.0007s0619 Capsella rubella HOM05D000049 ORTHO05D008785 5.5e-26 121.7 180 43.3
CARHR242610 Cardamine hirsuta HOM05D000049 ORTHO05D008785 1.6e-25 120.2 182 42.9
PSO210G6109 Papaver somniferum HOM05D000049 ORTHO05D008785 1.6e-25 120.2 89 68.5
Thhalv10026482m.g Eutrema salsugineum HOM05D000049 ORTHO05D008785 6.1e-25 118.2 79 77.2
PSO170G1282 Papaver somniferum HOM05D000049 ORTHO05D008785 6.1e-25 118.2 94 67.0
CSS0021501 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 7.9e-25 117.9 72 86.1
CSS0024818 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 1.0e-24 117.5 163 49.7
THA.LOC104807247 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 1.3e-24 117.1 82 73.2
HPP92_004768 Vanilla planifolia HOM05D000049 ORTHO05D008785 2.3e-24 116.3 88 65.9
MELO3C018482.2 Cucumis melo HOM05D000049 ORTHO05D000027 3.3e-23 112.5 78 76.9
Medtr1g107490 Medicago truncatula HOM05D000049 ORTHO05D008785 1.3e-22 110.5 81 67.9
FAN15G1433 Fragaria x ananassa HOM05D000049 ORTHO05D008785 3.7e-22 109.0 161 46.0
FAN24G0707 Fragaria x ananassa HOM05D000049 ORTHO05D008785 4.8e-22 108.6 161 46.6
Hund00143 Selenicereus undatus HOM05D000049 ORTHO05D008785 4.8e-22 108.6 94 63.8
SEGI_21574 Sequoiadendron giganteum HOM05D000049 ORTHO05D008785 4.1e-21 105.5 77 63.6
Dinv15757 Davidia involucrata HOM05D000049 ORTHO05D008785 5.9e-20 101.7 149 44.3
Zm00001eb048670 Zea mays HOM05D000049 ORTHO05D008785 1.9e-18 96.7 78 60.3
TAR376G0829 Trochodendron aralioides HOM05D000049 ORTHO05D008785 3.2e-18 95.9 91 54.9
Sabra09G0074400 Salix brachista HOM05D000049 ORTHO05D008785 8.8e-16 87.8 162 37.7
Pp3c1_21810 Physcomitrium patens HOM05D000049 ORTHO05D008785 1.5e-15 87.0 89 50.6
Mapoly0006s0145 Marchantia polymorpha HOM05D000049 ORTHO05D008785 2.0e-15 86.7 84 56.0
Os11g0621400 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 2.0e-15 86.7 86 51.2
vmacro19520 Vaccinium macrocarpon HOM05D000049 ORTHO05D008785 1.3e-14 84.0 56 71.4
ATR0691G295 Amborella trichopoda HOM05D000049 ORTHO05D008785 5.3e-13 78.6 55 74.5
SMO340G0196 Selaginella moellendorffii HOM05D000049 ORTHO05D008785 3.4e-12 75.9 76 50.0
SalBow6G4602 Salvia bowleyana HOM05D010989 ORTHO05D013112 4.5e-12 75.5 145 41.4
AagrBONN_evm.TU.Sc2ySwM_117.2783 Anthoceros agrestis HOM05D000049 ORTHO05D008785 1.0e-11 74.3 82 46.3
TAR628G1275 Trochodendron aralioides HOM05D000049 ORTHO05D008785 1.1e-10 70.9 54 61.1
FAN27G0752 Fragaria x ananassa HOM05D000049 ORTHO05D000027 1.0e-08 64.3 140 37.9
COL.COLO4_15744 Corchorus olitorius HOM05D001416 ORTHO05D002549 9.7e-07 57.8 34 79.4
Os10g0395200 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 6.3e-06 55.1 52 51.9


User provided reference genes

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