Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu018577.1 Olea europaea HOM05D008202 ORTHO05D010302 1.1e-47 193.0 97 100.0
MSTRG.19550 Avicennia marina HOM05D008202 ORTHO05D010302 4.6e-30 134.4 98 68.4
Migut.K00545 Erythranthe guttata HOM05D008202 ORTHO05D010302 3.2e-23 111.7 98 60.2
Hma1.2p1_0386F.1_g141760 Hydrangea macrophylla HOM05D008202 ORTHO05D010302 5.5e-23 110.9 90 60.0
Dinv42250 Davidia involucrata HOM05D008202 ORTHO05D010302 1.0e-21 106.7 90 61.1
CSS0001567 Camellia sinensis var. sinensis HOM05D008202 ORTHO05D010302 1.5e-20 102.8 89 60.7
Manes.03G026600 Manihot esculenta HOM05D008202 ORTHO05D010302 4.3e-20 101.3 95 56.8
SGA_v2.0_scaffold512G52633 Striga asiatica HOM05D008202 ORTHO05D010302 8.2e-19 97.1 99 57.6
MD02G1066600 Malus domestica HOM05D008202 ORTHO05D010302 1.8e-18 95.9 93 57.0
Actinidia39781 Actinidia chinensis HOM05D008202 ORTHO05D010302 5.3e-18 94.4 88 54.5
HanXRQChr12g0358111 Helianthus annuus HOM05D008202 ORTHO05D010302 2.6e-17 92.0 92 55.4
Thecc.09G099700 Theobroma cacao HOM05D008202 ORTHO05D010302 3.4e-17 91.7 89 51.7
Rhsim05G0039400 Rhododendron simsii HOM05D008202 ORTHO05D010302 4.5e-17 91.3 95 50.5
Lsat_1_v5_gn_8_98261 Lactuca sativa HOM05D008202 ORTHO05D010302 5.8e-17 90.9 95 55.8
DCAR_028656 Daucus carota HOM05D008202 ORTHO05D010302 1.3e-16 89.7 90 48.9
Peaxi162Scf00720g00418 Petunia axillaris HOM05D008202 ORTHO05D010302 1.3e-16 89.7 94 54.3
Dinv36682 Davidia involucrata HOM05D008202 ORTHO05D010302 1.7e-16 89.4 70 60.0
Prupe.7G218700 Prunus persica HOM05D008202 ORTHO05D010302 2.9e-16 88.6 95 52.6
Actinidia17520 Actinidia chinensis HOM05D008202 ORTHO05D010302 6.5e-16 87.4 87 51.7
TWI63G1052 Tripterygium wilfordii HOM05D008202 ORTHO05D010302 8.4e-16 87.0 87 51.7
Ciclev10010342m.g Citrus clementina HOM05D008202 ORTHO05D010302 1.9e-15 85.9 76 61.8
Haze_25829 Corylus avellana HOM05D008202 ORTHO05D010302 1.9e-15 85.9 89 50.6
vmacro10849 Vaccinium macrocarpon HOM05D008202 ORTHO05D010302 1.9e-15 85.9 76 56.6
Cc06_g10540 Coffea canephora HOM05D008202 ORTHO05D010302 2.5e-15 85.5 92 48.9
Manes.04G125801 Manihot esculenta HOM05D008202 ORTHO05D010302 2.5e-15 85.5 89 48.3
Manes.13G078801 Manihot esculenta HOM05D008202 ORTHO05D010302 2.5e-15 85.5 89 48.3
GSVIVG01015295001 Vitis vinifera HOM05D008202 ORTHO05D010302 2.1e-14 82.4 91 49.5
Ciclev10027258m.g Citrus clementina HOM05D008202 ORTHO05D010302 2.7e-14 82.0 66 62.1
Gohir.A06G067500 Gossypium hirsutum HOM05D008202 ORTHO05D010302 2.7e-14 82.0 93 49.5
CiPaw.04G157000 Carya illinoinensis HOM05D008202 ORTHO05D010302 3.5e-14 81.6 92 47.8
PGSC0003DMG400046448 Solanum tuberosum HOM05D001685 ORTHO05D006653 3.5e-14 81.6 87 56.3
Gorai.010G077500 Gossypium raimondii HOM05D008202 ORTHO05D010302 7.9e-14 80.5 93 48.4
CiPaw.04G155900 Carya illinoinensis HOM05D008202 ORTHO05D010302 1.3e-13 79.7 92 46.7
Solyc04g058130.3 Solanum lycopersicum HOM05D008202 ORTHO05D010302 1.3e-13 79.7 87 55.2
FvH4_1g06280 Fragaria vesca HOM05D008202 ORTHO05D010302 5.1e-13 77.8 95 48.4
FAN19G1093 Fragaria x ananassa HOM05D008202 ORTHO05D010302 5.1e-13 77.8 95 48.4
FAN23G0175 Fragaria x ananassa HOM05D008202 ORTHO05D010302 1.1e-12 76.6 94 46.8
Sc18g0001520 Simmondsia chinensis HOM05D008202 ORTHO05D010302 1.1e-12 76.6 89 46.1
COL.COLO4_34733 Corchorus olitorius HOM05D008202 ORTHO05D010302 7.4e-12 73.9 51 64.7
Ah.14g082540 Amaranthus hybridus HOM05D008202 ORTHO05D010302 9.7e-12 73.6 42 71.4
FAN26G0167 Fragaria x ananassa HOM05D008202 ORTHO05D010302 9.7e-12 73.6 59 62.7
FAN26G3206 Fragaria x ananassa HOM05D008202 ORTHO05D010302 9.7e-12 73.6 59 62.7
CDE08G1102 Ceratophyllum demersum HOM05D008202 ORTHO05D010302 1.6e-11 72.8 88 45.5
Gohir.D06G066100 Gossypium hirsutum HOM05D008202 ORTHO05D010302 1.6e-11 72.8 93 47.3
Nitab4.5_0002557g0010 Nicotiana tabacum HOM05D001685 ORTHO05D006653 1.6e-11 72.8 50 66.0
Ah.14g083220 Amaranthus hybridus HOM05D008202 ORTHO05D010302 2.8e-11 72.0 93 44.1
MD15G1197100 Malus domestica HOM05D008202 ORTHO05D010302 2.8e-11 72.0 82 45.1
EL10Ac8g18376 Beta vulgaris HOM05D008202 ORTHO05D010302 3.7e-11 71.6 93 45.2
Medtr6g088800 Medicago truncatula HOM05D008202 ORTHO05D010302 6.3e-11 70.9 64 53.1
AUR62021399 Chenopodium quinoa HOM05D008202 ORTHO05D010302 8.2e-11 70.5 93 45.2
AUR62010887 Chenopodium quinoa HOM05D008202 ORTHO05D010302 1.1e-10 70.1 93 44.1
RcHm_v2.0_Chr2g0091981 Rosa chinensis HOM05D008202 ORTHO05D010302 4.1e-10 68.2 42 71.4
ClCG11G002070 Citrullus lanatus HOM05D008202 ORTHO05D010302 6.9e-10 67.4 71 47.9
ATR0705G156 Amborella trichopoda HOM05D008202 ORTHO05D010302 1.2e-09 66.6 73 47.9
Ciclev10027039m.g Citrus clementina HOM05D008202 ORTHO05D010302 1.2e-09 66.6 96 43.8
Atru.chr7.1471 Acer truncatum HOM05D008202 ORTHO05D010302 1.5e-09 66.2 89 42.7
Nn8g39054 Nelumbo nucifera HOM05D008202 ORTHO05D010302 2.0e-09 65.9 88 43.2
unitig_52.g17095 Utricularia gibba HOM05D008202 ORTHO05D010302 2.0e-09 65.9 51 56.9
MBI01_g10122_MAGBIO Magnolia biondii HOM05D003005 ORTHO05D004170 3.4e-09 65.1 67 47.8
CsaV3_2G001850 Cucumis sativus L. HOM05D008202 ORTHO05D010302 4.5e-09 64.7 41 58.5
HPP92_009087 Vanilla planifolia HOM05D008202 ORTHO05D010302 4.5e-09 64.7 93 40.9
unitig_52.g17250 Utricularia gibba HOM05D008202 ORTHO05D010302 2.9e-08 62.0 51 52.9
Lalb_Chr14g0371911 Lupinus albus HOM05D008202 ORTHO05D010302 3.8e-08 61.6 87 40.2
CAN.G1325.3 Capsicum annuum HOM05D001685 ORTHO05D006653 5.0e-08 61.2 90 45.6
Psat1g048280 Pisum sativum HOM05D008202 ORTHO05D010302 5.0e-08 61.2 91 36.3
Eucgr.C03726 Eucalyptus grandis HOM05D008202 ORTHO05D010302 8.5e-08 60.5 77 40.3
PSO210G1322 Papaver somniferum HOM05D061259 ORTHO05D010302 1.4e-07 59.7 39 61.5
PSO210G2383 Papaver somniferum HOM05D061259 ORTHO05D010302 1.4e-07 59.7 39 61.5
Mapoly0004s0023 Marchantia polymorpha HOM05D039400 ORTHO05D034304 9.3e-07 57.0 46 56.5
PGR102G0794 Punica granatum HOM05D008202 ORTHO05D010302 7.9e-06 53.9 74 44.6


User provided reference genes

Program Settings