Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu018569.1 Olea europaea HOM05D009522 ORTHO05D009846 6.3e-192 674.1 376 100.0
Oeu040384.1 Olea europaea HOM05D009522 ORTHO05D009846 6.5e-88 328.6 385 58.7
Cc00_g05330 Coffea canephora HOM05D009522 ORTHO05D009846 4.1e-34 149.8 425 39.5
MSTRG.25778 Avicennia marina HOM05D009522 ORTHO05D009846 1.7e-32 144.4 472 36.9
Rhsim07G0169800 Rhododendron simsii HOM05D033576 ORTHO05D009846 1.6e-30 137.9 433 37.9
MSTRG.1612 Avicennia marina HOM05D036756 ORTHO05D009846 4.4e-28 129.8 428 37.1
CAN.G908.7 Capsicum annuum HOM05D009522 ORTHO05D009846 4.4e-28 129.8 428 37.6
Peaxi162Scf00288g00084 Petunia axillaris HOM05D009522 ORTHO05D009846 7.8e-25 119.0 415 34.9
SGA_v2.0_scaffold27G11671 Striga asiatica HOM05D009522 ORTHO05D009846 7.8e-25 119.0 409 37.7
Nitab4.5_0010092g0020 Nicotiana tabacum HOM05D009522 ORTHO05D009846 1.2e-22 111.7 458 34.1
Duzib187G1602 Durio zibethinus HOM05D019025 ORTHO05D009846 2.1e-22 110.9 417 34.1
Nitab4.5_0001159g0190 Nicotiana tabacum HOM05D009522 ORTHO05D009846 1.5e-20 104.8 447 34.2
Peaxi162Scf00459g00082 Petunia axillaris HOM05D009522 ORTHO05D009846 2.0e-20 104.4 494 32.2
Duzib168G1354 Durio zibethinus HOM05D019025 ORTHO05D009846 2.6e-20 104.0 420 32.6
Solyc12g096400.2 Solanum lycopersicum HOM05D009522 ORTHO05D009846 7.5e-20 102.4 461 31.7
PGSC0003DMG400029280 Solanum tuberosum HOM05D009522 ORTHO05D009846 2.2e-19 100.9 454 30.8
CAN.G566.64 Capsicum annuum HOM05D009522 ORTHO05D009846 2.9e-19 100.5 452 32.5
Migut.A00437 Erythranthe guttata HOM05D009522 ORTHO05D009846 6.4e-19 99.4 588 31.5
unitig_32.g10944 Utricularia gibba HOM05D009522 ORTHO05D009846 1.2e-17 95.1 440 33.4
Sopen08g022670 Solanum pennellii HOM05D009522 ORTHO05D009846 2.3e-16 90.9 438 33.6
Sopen12g032250 Solanum pennellii HOM05D009522 ORTHO05D009846 6.6e-16 89.4 465 30.3
Nitab4.5_0000502g0110 Nicotiana tabacum HOM05D009522 ORTHO05D009846 1.5e-15 88.2 417 33.6
PGSC0003DMG400029579 Solanum tuberosum HOM05D009522 ORTHO05D009846 3.3e-15 87.0 452 32.1
Nitab4.5_0002023g0020 Nicotiana tabacum HOM05D009522 ORTHO05D009846 1.6e-14 84.7 431 30.4
PGR031G3799 Punica granatum HOM05D009522 ORTHO05D009846 4.7e-14 83.2 426 31.0
MBI14_g19445_MAGBIO Magnolia biondii HOM05D021794 ORTHO05D009846 3.4e-12 77.0 406 30.5
Potri.018G005500 Populus trichocarpa HOM05D014278 ORTHO05D009846 5.8e-12 76.3 444 29.3
Solyc08g069020.1 Solanum lycopersicum HOM05D009522 ORTHO05D009846 9.8e-12 75.5 440 31.8
Aqoxy7G02994 Aquilegia oxysepala HOM05D021794 ORTHO05D009846 2.2e-11 74.3 422 30.1
Lj1g0027444 Lotus japonicus HOM05D013197 ORTHO05D009846 2.2e-11 74.3 484 31.6
Potri.006G274600 Populus trichocarpa HOM05D014278 ORTHO05D009846 2.2e-11 74.3 417 31.2
DCAR_003022 Daucus carota HOM05D009522 ORTHO05D009846 2.9e-11 73.9 440 30.9
Ah.10g033870 Amaranthus hybridus HOM05D016385 ORTHO05D018262 3.7e-11 73.6 396 33.3
MELO3C011188.2 Cucumis melo HOM05D019337 ORTHO05D009846 3.7e-11 73.6 421 30.4
MSTRG.13944 Avicennia marina HOM05D009522 ORTHO05D009846 6.4e-11 72.8 343 30.0
MSTRG.11810 Avicennia marina HOM05D009522 ORTHO05D009846 8.3e-11 72.4 148 45.3
SalBow8G0117 Salvia bowleyana HOM05D036756 ORTHO05D009846 1.1e-10 72.0 402 31.8
SalBow8G1342 Salvia bowleyana HOM05D036756 ORTHO05D009846 1.4e-10 71.6 402 31.8
Sabra18G0011200 Salix brachista HOM05D014278 ORTHO05D009846 1.9e-10 71.2 447 30.2
Sabra18G0013600 Salix brachista HOM05D014278 ORTHO05D009846 2.4e-10 70.9 447 30.2
MD15G1107800 Malus domestica HOM05D013263 ORTHO05D009846 5.4e-10 69.7 439 29.8
Ciclev10010613m.g Citrus clementina HOM05D014278 ORTHO05D009846 9.2e-10 68.9 462 28.1
EL10Ac2g03757 Beta vulgaris HOM05D016385 ORTHO05D018262 1.2e-09 68.6 420 31.0
Prupe.1G460100 Prunus persica HOM05D013263 ORTHO05D009846 1.6e-09 68.2 418 27.5
COL.COLO4_19033 Corchorus olitorius HOM05D019025 ORTHO05D009846 2.1e-09 67.8 438 31.3
Glyma.04G075500 Glycine max HOM05D013197 ORTHO05D012811 2.1e-09 67.8 444 29.5
CAN.G673.17 Capsicum annuum HOM05D017514 ORTHO05D009846 2.7e-09 67.4 44 77.3
CiPaw.07G212500 Carya illinoinensis HOM05D013263 ORTHO05D009846 1.7e-08 64.7 385 32.2
AUR62009070 Chenopodium quinoa HOM05D016385 ORTHO05D018262 1.7e-08 64.7 467 30.0
PGSC0003DMG400026295 Solanum tuberosum HOM05D017514 ORTHO05D009846 2.3e-08 64.3 45 82.2
Thecc.09G007200 Theobroma cacao HOM05D019025 ORTHO05D009846 2.3e-08 64.3 424 29.0
Nn8g40403 Nelumbo nucifera HOM05D021794 ORTHO05D016335 3.0e-08 63.9 482 29.7
RcHm_v2.0_Chr6g0304991 Rosa chinensis HOM05D013263 ORTHO05D009846 3.0e-08 63.9 439 29.6
Lalb_Chr08g0243541 Lupinus albus HOM05D013197 ORTHO05D012811 5.1e-08 63.2 405 28.6
ATR0564G160 Amborella trichopoda HOM05D003021 ORTHO05D002235 1.5e-07 61.6 40 82.5
CsaV3_2G031380 Cucumis sativus L. HOM05D019337 ORTHO05D009846 1.5e-07 61.6 433 28.9
Migut.E01423 Erythranthe guttata HOM05D009522 ORTHO05D009846 1.9e-07 61.2 56 66.1
Lalb_Chr23g0269121 Lupinus albus HOM05D013197 ORTHO05D012811 2.5e-07 60.8 459 28.3
TWI34G1417 Tripterygium wilfordii HOM05D014278 ORTHO05D009846 3.3e-07 60.5 402 27.6
AUR62042563 Chenopodium quinoa HOM05D003021 ORTHO05D002235 5.6e-07 59.7 49 75.5
ECA240G3142 Erigeron canadensis HOM05D009522 ORTHO05D009846 5.6e-07 59.7 41 75.6
Peaxi162Scf00045g01739 Petunia axillaris HOM05D017514 ORTHO05D009846 7.3e-07 59.3 426 30.0
TWI32G0873 Tripterygium wilfordii HOM05D013263 ORTHO05D009846 7.3e-07 59.3 400 29.8
Nitab4.5_0003145g0060 Nicotiana tabacum HOM05D003021 ORTHO05D002235 9.5e-07 58.9 49 71.4
Glyma.06G076700 Glycine max HOM05D013197 ORTHO05D012811 1.6e-06 58.2 427 30.9
ECA232G0555 Erigeron canadensis HOM05D003021 ORTHO05D002235 2.1e-06 57.8 49 69.4
Manes.16G135600 Manihot esculenta HOM05D014278 ORTHO05D009846 2.8e-06 57.4 435 29.9
THA.LOC104822343 Tarenaya hassleriana HOM05D009950 ORTHO05D002235 2.8e-06 57.4 51 68.6
HanXRQChr09g0264151 Helianthus annuus HOM05D003021 ORTHO05D002235 3.6e-06 57.0 49 69.4
Lj2g0010760 Lotus japonicus HOM05D003021 ORTHO05D002235 3.6e-06 57.0 49 69.4
VMungo0464G0637 Vigna mungo HOM05D003021 ORTHO05D002235 3.6e-06 57.0 36 83.3
MSTRG.23902 Avicennia marina HOM05D003021 ORTHO05D002235 4.7e-06 56.6 49 69.4
Dinv11486 Davidia involucrata HOM05D003021 ORTHO05D002235 4.7e-06 56.6 44 75.0
Migut.K01293 Erythranthe guttata HOM05D003021 ORTHO05D002235 4.7e-06 56.6 46 69.6
Phvul.004G033600 Phaseolus vulgaris HOM05D003021 ORTHO05D002235 4.7e-06 56.6 49 69.4
Zm00001eb400410 Zea mays HOM05D003021 ORTHO05D002235 4.7e-06 56.6 49 69.4
arahy.Tifrunner.gnm1.ann1.JN5ZJX Arachis hypogaea HOM05D003021 ORTHO05D002235 6.2e-06 56.2 49 69.4
BraA04t16870Z Brassica rapa HOM05D003021 ORTHO05D002235 6.2e-06 56.2 36 83.3
AUR62018150 Chenopodium quinoa HOM05D003021 ORTHO05D002235 6.2e-06 56.2 64 64.1
Glyma.14G134700 Glycine max HOM05D016469 ORTHO05D012811 6.2e-06 56.2 419 30.1
Lj8P444T9 Lonicera japonica HOM05D009522 ORTHO05D009846 6.2e-06 56.2 113 42.5
QL12p025151 Quercus lobata HOM05D013263 ORTHO05D009846 6.2e-06 56.2 446 27.8
SalBow1G6367 Salvia bowleyana HOM05D003021 ORTHO05D002235 6.2e-06 56.2 44 75.0
BcaB06g27294 Brassica carinata HOM05D003021 ORTHO05D002235 8.1e-06 55.8 50 66.0
Lj7C750T8 Lonicera japonica HOM05D031498 ORTHO05D009846 8.1e-06 55.8 223 33.6
Nn3g17378 Nelumbo nucifera HOM05D003021 ORTHO05D002235 8.1e-06 55.8 60 63.3
Thecc.04G090900 Theobroma cacao HOM05D003021 ORTHO05D002235 8.1e-06 55.8 44 70.5


User provided reference genes

Program Settings