Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu018568.1 Olea europaea HOM05D006706 ORTHO05D008794 2.5e-98 362.1 180 100.0
Migut.A00436 Erythranthe guttata HOM05D006706 ORTHO05D008794 5.3e-64 248.1 180 71.1
MSTRG.25780 Avicennia marina HOM05D006706 ORTHO05D008794 3.4e-63 245.4 180 70.6
Peaxi162Scf00459g00840 Petunia axillaris HOM05D006706 ORTHO05D008794 2.0e-58 229.6 146 78.1
Solyc12g096390.2 Solanum lycopersicum HOM05D006706 ORTHO05D008794 2.6e-58 229.2 141 79.4
PGSC0003DMG400029370 Solanum tuberosum HOM05D006706 ORTHO05D008794 9.7e-58 227.3 123 87.8
Nitab4.5_0010092g0010 Nicotiana tabacum HOM05D006706 ORTHO05D008794 2.2e-57 226.1 123 88.6
CAN.G566.65 Capsicum annuum HOM05D006706 ORTHO05D008794 4.8e-57 224.9 176 66.5
Sopen12g032240 Solanum pennellii HOM05D006706 ORTHO05D008794 4.8e-57 224.9 201 60.7
Nitab4.5_0001159g0140 Nicotiana tabacum HOM05D006706 ORTHO05D008794 4.1e-56 221.9 123 87.0
RcHm_v2.0_Chr1g0366021 Rosa chinensis HOM05D006706 ORTHO05D008794 5.3e-56 221.5 131 80.9
FAN27G0070 Fragaria x ananassa HOM05D006706 ORTHO05D008794 3.4e-55 218.8 161 69.6
CANSAT78G2093 Cannabis sativa HOM05D006706 ORTHO05D008794 4.5e-55 218.4 157 70.7
Psat0s1809g0040 Pisum sativum HOM05D006706 ORTHO05D008794 4.5e-55 218.4 161 67.7
Potri.018G008000 Populus trichocarpa HOM05D006706 ORTHO05D008794 5.9e-55 218.0 194 61.9
SalBow4G1165 Salvia bowleyana HOM05D006706 ORTHO05D008794 5.9e-55 218.0 179 64.2
Lj7C748T8 Lonicera japonica HOM05D006706 ORTHO05D008794 7.7e-55 217.6 185 63.2
FvH4_2g36680 Fragaria vesca HOM05D006706 ORTHO05D008794 1.0e-54 217.2 161 68.9
FAN20G0608 Fragaria x ananassa HOM05D006706 ORTHO05D008794 1.0e-54 217.2 161 68.9
PSO170G0804 Papaver somniferum HOM05D006706 ORTHO05D008794 2.2e-54 216.1 148 73.0
Prupe.1G459500 Prunus persica HOM05D006706 ORTHO05D008794 2.9e-54 215.7 160 68.8
AUR62020287 Chenopodium quinoa HOM05D006706 ORTHO05D008794 5.0e-54 214.9 145 72.4
Actinidia22256 Actinidia chinensis HOM05D006706 ORTHO05D008794 6.5e-54 214.5 118 85.6
Manes.03G004300 Manihot esculenta HOM05D006706 ORTHO05D008794 8.5e-54 214.2 138 77.5
PSO063G0792 Papaver somniferum HOM05D006706 ORTHO05D008794 8.5e-54 214.2 161 68.3
TPR.G12362 Trifolium pratense HOM05D006706 ORTHO05D008794 8.5e-54 214.2 161 67.1
Gorai.010G122100 Gossypium raimondii HOM05D006706 ORTHO05D008794 1.1e-53 213.8 182 63.2
Nn3g19671 Nelumbo nucifera HOM05D006706 ORTHO05D008794 1.1e-53 213.8 134 76.9
Glyma.04G075900 Glycine max HOM05D006706 ORTHO05D008794 1.9e-53 213.0 152 71.1
RcHm_v2.0_Chr6g0305051 Rosa chinensis HOM05D006706 ORTHO05D008794 1.9e-53 213.0 131 79.4
Ca_15656_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 2.5e-53 212.6 164 67.1
MD08G1127800 Malus domestica HOM05D006706 ORTHO05D008794 2.5e-53 212.6 180 62.8
QL12p025335 Quercus lobata HOM05D006706 ORTHO05D008794 2.5e-53 212.6 148 70.3
DCAR_006314 Daucus carota HOM05D006706 ORTHO05D008794 3.2e-53 212.2 122 81.1
Haze_21752 Corylus avellana HOM05D006706 ORTHO05D008794 4.2e-53 211.8 130 79.2
ECA246G3311 Erigeron canadensis HOM05D006706 ORTHO05D008794 4.2e-53 211.8 180 61.1
Thhalv10014763m.g Eutrema salsugineum HOM05D006706 ORTHO05D008794 4.2e-53 211.8 148 70.9
arahy.Tifrunner.gnm1.ann1.92NGGW Arachis hypogaea HOM05D006706 ORTHO05D008794 5.5e-53 211.5 135 77.8
Lsat_1_v5_gn_3_19441 Lactuca sativa HOM05D006706 ORTHO05D008794 5.5e-53 211.5 183 62.3
Sabra18G0015100 Salix brachista HOM05D006706 ORTHO05D008794 7.2e-53 211.1 152 71.1
Eucgr.C04010 Eucalyptus grandis HOM05D006706 ORTHO05D008794 9.4e-53 210.7 118 84.7
arahy.Tifrunner.gnm1.ann1.G0PQAF Arachis hypogaea HOM05D006706 ORTHO05D008794 1.2e-52 210.3 190 60.0
Haze_21755 Corylus avellana HOM05D006706 ORTHO05D008794 1.2e-52 210.3 130 78.5
Thecc.09G008100 Theobroma cacao HOM05D006706 ORTHO05D008794 1.2e-52 210.3 154 66.9
TWI34G0378 Tripterygium wilfordii HOM05D006706 ORTHO05D008794 1.2e-52 210.3 142 74.6
Ca_15664_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 1.6e-52 209.9 144 72.2
Atru.chr7.2653 Acer truncatum HOM05D006706 ORTHO05D008794 2.1e-52 209.5 124 79.8
Cfa013279 Carpinus fangiana HOM05D006706 ORTHO05D008794 2.7e-52 209.1 118 82.2
Dinv26561 Davidia involucrata HOM05D006706 ORTHO05D008794 2.7e-52 209.1 153 69.9
Duzib187G1270 Durio zibethinus HOM05D006706 ORTHO05D008794 2.7e-52 209.1 145 71.0
Hund07113 Selenicereus undatus HOM05D006706 ORTHO05D008794 2.7e-52 209.1 140 73.6
vmacro05047 Vaccinium macrocarpon HOM05D006706 ORTHO05D008794 3.6e-52 208.8 142 73.9
Lalb_Chr23g0269141 Lupinus albus HOM05D006706 ORTHO05D008794 4.7e-52 208.4 152 69.7
VMungo1309G0608 Vigna mungo HOM05D006706 ORTHO05D008794 4.7e-52 208.4 154 69.5
Phvul.009G101700 Phaseolus vulgaris HOM05D006706 ORTHO05D008794 6.1e-52 208.0 179 62.0
GSVIVG01035513001 Vitis vinifera HOM05D006706 ORTHO05D008794 6.1e-52 208.0 159 63.5
Lj1g0012669 Lotus japonicus HOM05D006706 ORTHO05D008794 7.9e-52 207.6 149 71.8
Medtr3g108900 Medicago truncatula HOM05D006706 ORTHO05D008794 7.9e-52 207.6 173 63.0
Rhsim07G0178100 Rhododendron simsii HOM05D006706 ORTHO05D008794 7.9e-52 207.6 131 74.0
Ciclev10009845m.g Citrus clementina HOM05D006706 ORTHO05D008794 1.0e-51 207.2 137 73.7
COL.COLO4_19024 Corchorus olitorius HOM05D006706 ORTHO05D008794 1.0e-51 207.2 139 72.7
BraA03t09810Z Brassica rapa HOM05D006706 ORTHO05D008794 1.4e-51 206.8 150 69.3
CsaV3_2G031370 Cucumis sativus L. HOM05D006706 ORTHO05D008794 1.4e-51 206.8 142 70.4
Duzib168G0001 Durio zibethinus HOM05D006706 ORTHO05D008794 1.4e-51 206.8 154 68.8
HanXRQChr17g0538031 Helianthus annuus HOM05D006706 ORTHO05D008794 1.4e-51 206.8 181 63.0
Glyma.06G077100 Glycine max HOM05D006706 ORTHO05D008794 1.8e-51 206.5 142 73.2
THA.LOC104814973 Tarenaya hassleriana HOM05D006706 ORTHO05D008794 1.8e-51 206.5 121 79.3
CDE02G4751 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 2.3e-51 206.1 148 67.6
Sp6g32760 Schrenkiella parvula HOM05D006706 ORTHO05D008794 2.3e-51 206.1 147 68.7
Sed0007748 Sechium edule HOM05D006706 ORTHO05D008794 3.0e-51 205.7 167 62.9
BcaB01g06271 Brassica carinata HOM05D006706 ORTHO05D008794 3.9e-51 205.3 132 74.2
Cpa.g.sc23.24 Carica papaya HOM05D006706 ORTHO05D008794 3.9e-51 205.3 170 64.1
AL6G21240 Arabidopsis lyrata HOM05D006706 ORTHO05D008794 5.2e-51 204.9 131 74.8
Carub.0006s0917 Capsella rubella HOM05D006706 ORTHO05D008794 5.2e-51 204.9 171 60.8
CSS0022194 Camellia sinensis var. sinensis HOM05D006706 ORTHO05D008794 6.7e-51 204.5 158 68.4
CARHR202620 Cardamine hirsuta HOM05D006706 ORTHO05D008794 6.7e-51 204.5 173 63.0
CiPaw.08G020300 Carya illinoinensis HOM05D006706 ORTHO05D008794 8.8e-51 204.1 144 70.1
A03p04700 Brassica napus HOM05D006706 ORTHO05D008794 1.1e-50 203.8 129 75.2
AT5G10700 Arabidopsis thaliana HOM05D006706 ORTHO05D008794 2.0e-50 203.0 131 74.8
Aa31LG3G16430 Aethionema arabicum HOM05D006706 ORTHO05D008794 3.3e-50 202.2 177 59.9
BcaC04g19291 Brassica carinata HOM05D006706 ORTHO05D008794 3.3e-50 202.2 132 73.5
PGR044G2738 Punica granatum HOM05D006706 ORTHO05D008794 4.4e-50 201.8 188 58.5
BcaB01g05507 Brassica carinata HOM05D006706 ORTHO05D008794 5.7e-50 201.4 150 66.7
C03p05410 Brassica napus HOM05D006706 ORTHO05D008794 5.7e-50 201.4 150 66.7
MELO3C011186.2 Cucumis melo HOM05D006706 ORTHO05D008794 5.7e-50 201.4 176 60.8
MBI14_g10732_MAGBIO Magnolia biondii HOM05D006706 ORTHO05D008794 5.7e-50 201.4 182 61.5
CiPaw.07G211900 Carya illinoinensis HOM05D006706 ORTHO05D008794 1.7e-49 199.9 139 72.7
Aqoxy7G02908 Aquilegia oxysepala HOM05D006706 ORTHO05D008794 1.1e-48 197.2 155 63.9
SGA_v2.0_scaffold193G40663 Striga asiatica HOM05D006706 ORTHO05D008794 1.1e-48 197.2 206 56.3
ATR0580G320 Amborella trichopoda HOM05D006706 ORTHO05D008794 5.3e-48 194.9 130 73.8
AUR62037716 Chenopodium quinoa HOM05D006706 ORTHO05D008794 1.6e-47 193.4 131 71.0
SEGI_18071 Sequoiadendron giganteum HOM05D006706 ORTHO05D008794 3.8e-46 188.7 152 61.2
HPP92_021967 Vanilla planifolia HOM05D006706 ORTHO05D008794 3.8e-46 188.7 144 66.7
Zm00001eb071580 Zea mays HOM05D006706 ORTHO05D008794 3.8e-46 188.7 167 55.7
Os04g0605200 Oryza sativa ssp. japonica HOM05D006706 ORTHO05D008794 5.0e-46 188.3 118 72.9
AagrBONN_evm.TU.Sc2ySwM_228.645 Anthoceros agrestis HOM05D000036 ORTHO05D038461 1.1e-45 187.2 151 62.3
HPP92_021941 Vanilla planifolia HOM05D006706 ORTHO05D008794 1.9e-45 186.4 146 65.1
Pp3c18_3890 Physcomitrium patens HOM05D006706 ORTHO05D008794 2.7e-44 182.6 137 62.8
SMO203G0167 Selaginella moellendorffii HOM05D006706 ORTHO05D008794 4.4e-42 175.3 126 65.1
Ah.10g024780 Amaranthus hybridus HOM05D006706 ORTHO05D008794 1.1e-40 170.6 139 61.2
MD15G1107200 Malus domestica HOM05D006706 ORTHO05D008794 1.1e-40 170.6 195 52.8
unitig_21.g20325 Utricularia gibba HOM05D006706 ORTHO05D008794 3.1e-40 169.1 199 52.3
ClCG08G012660 Citrullus lanatus HOM05D006706 ORTHO05D008794 4.1e-40 168.7 165 55.2
Mapoly0013s0161 Marchantia polymorpha HOM05D006706 ORTHO05D008794 5.9e-39 164.9 145 56.6
CBR_g3167 Chara braunii HOM05D006706 ORTHO05D008794 8.5e-38 161.0 126 61.9
Cre10.g449350 Chlamydomonas reinhardtii HOM05D006706 ORTHO05D008794 3.0e-35 152.5 137 55.5
MCO07G367 Micromonas commoda HOM05D006706 ORTHO05D008794 9.8e-34 147.5 116 58.6
EL10Ac2g02413 Beta vulgaris HOM05D006706 ORTHO05D008794 1.7e-22 110.2 61 83.6
Gohir.D06G107400 Gossypium hirsutum HOM05D006706 ORTHO05D008794 1.9e-21 106.7 125 49.6
Sc06g0000170 Simmondsia chinensis HOM05D006706 ORTHO05D008794 3.3e-21 105.9 71 70.4
TAR636G3689 Trochodendron aralioides HOM05D006706 ORTHO05D008794 4.3e-21 105.5 62 77.4
Gohir.A06G105300 Gossypium hirsutum HOM05D006706 ORTHO05D008794 1.6e-20 103.6 57 78.9
PRCOL_00004161 Prasinoderma coloniale HOM05D006706 ORTHO05D008794 1.4e-19 100.5 120 49.2
Haze_27087 Corylus avellana HOM05D006706 ORTHO05D008794 6.8e-19 98.2 120 45.0
CDE06G2578 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 1.7e-14 83.6 90 46.7
A10p26910 Brassica napus HOM05D006706 ORTHO05D028018 6.8e-11 71.6 60 61.7
Sed0005624 Sechium edule HOM05D006706 ORTHO05D373521 5.0e-06 55.5 60 46.7


User provided reference genes

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