Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu018557.4 Olea europaea HOM05D002949 ORTHO05D003151 5.0e-34 147.1 71 100.0
Oeu051329.1 Olea europaea HOM05D002949 ORTHO05D003151 4.1e-20 100.9 73 71.2
Oeu059547.2 Olea europaea HOM05D002949 ORTHO05D003151 9.2e-20 99.8 59 81.4
Oeu043690.1 Olea europaea HOM05D002949 ORTHO05D003151 3.5e-19 97.8 73 68.5
Oeu014708.1 Olea europaea HOM05D002949 ORTHO05D003151 2.3e-18 95.1 59 74.6
Cc02_g12440 Coffea canephora HOM05D002949 ORTHO05D003151 7.3e-17 90.1 74 60.8
Nitab4.5_0009994g0030 Nicotiana tabacum HOM05D002949 ORTHO05D003151 2.1e-16 88.6 74 59.5
MSTRG.7290 Avicennia marina HOM05D002949 ORTHO05D003151 3.6e-16 87.8 73 63.0
Peaxi162Scf00083g00012 Petunia axillaris HOM05D002949 ORTHO05D003151 6.2e-16 87.0 74 56.8
Nitab4.5_0000190g0100 Nicotiana tabacum HOM05D002949 ORTHO05D003151 1.1e-15 86.3 74 58.1
MSTRG.15935 Avicennia marina HOM05D002949 ORTHO05D003151 1.4e-15 85.9 73 61.6
CAN.G424.14 Capsicum annuum HOM05D002949 ORTHO05D003151 1.4e-15 85.9 74 56.8
Solyc02g079150.2 Solanum lycopersicum HOM05D002949 ORTHO05D003151 1.5e-14 82.4 74 59.5
Sopen02g023950 Solanum pennellii HOM05D002949 ORTHO05D003151 2.6e-14 81.6 74 58.1
MSTRG.13182 Avicennia marina HOM05D002949 ORTHO05D003151 5.8e-14 80.5 73 58.9
Lj2A279T59 Lonicera japonica HOM05D002949 ORTHO05D003151 2.9e-13 78.2 76 55.3
Migut.M01213 Erythranthe guttata HOM05D002949 ORTHO05D003151 3.7e-13 77.8 59 64.4
PGR004G0173 Punica granatum HOM05D002949 ORTHO05D003151 7.1e-12 73.6 61 63.9
Solyc10g005480.3 Solanum lycopersicum HOM05D002949 ORTHO05D003151 7.1e-12 73.6 56 57.1
Sopen10g001460 Solanum pennellii HOM05D002949 ORTHO05D003151 7.1e-12 73.6 56 57.1
TWI38G1696 Tripterygium wilfordii HOM05D002949 ORTHO05D003151 7.1e-12 73.6 63 60.3
Oeu059554.1 Olea europaea HOM05D002949 ORTHO05D003151 1.2e-11 72.8 70 58.6
TWI63G1783 Tripterygium wilfordii HOM05D002949 ORTHO05D003151 2.7e-11 71.6 63 58.7
Dinv40479 Davidia involucrata HOM05D002949 ORTHO05D003151 3.5e-11 71.2 62 59.7
SGA_v2.0_scaffold114G31981 Striga asiatica HOM05D002949 ORTHO05D003151 3.5e-11 71.2 59 57.6
Nitab4.5_0002222g0070 Nicotiana tabacum HOM05D002949 ORTHO05D003151 4.6e-11 70.9 62 53.2
CAN.G132.15 Capsicum annuum HOM05D002949 ORTHO05D003151 6.0e-11 70.5 61 55.7
PGSC0003DMG400011249 Solanum tuberosum HOM05D002949 ORTHO05D003151 6.0e-11 70.5 61 55.7
Oeu043681.1 Olea europaea HOM05D002949 ORTHO05D003151 1.0e-10 69.7 55 63.6
Rhsim13G0169900 Rhododendron simsii HOM05D002949 ORTHO05D003151 1.0e-10 69.7 56 57.1
vmacro03809 Vaccinium macrocarpon HOM05D002949 ORTHO05D003151 1.3e-10 69.3 57 56.1
Nitab4.5_0005936g0030 Nicotiana tabacum HOM05D002949 ORTHO05D003151 1.7e-10 68.9 51 60.8
CSS0042931 Camellia sinensis var. sinensis HOM05D002949 ORTHO05D003151 3.0e-10 68.2 53 62.3
Hma1.2p1_1182F.1_g264820 Hydrangea macrophylla HOM05D002949 ORTHO05D003151 3.0e-10 68.2 62 53.2
DCAR_004138 Daucus carota HOM05D002949 ORTHO05D003151 3.9e-10 67.8 56 60.7
MD10G1303400 Malus domestica HOM05D002949 ORTHO05D003151 5.1e-10 67.4 55 54.5
ClCG00G005360 Citrullus lanatus HOM05D002949 ORTHO05D003151 8.6e-10 66.6 62 53.2
ClCG01G022560 Citrullus lanatus HOM05D002949 ORTHO05D003151 8.6e-10 66.6 62 53.2
Potri.011G042800 Populus trichocarpa HOM05D002949 ORTHO05D003151 8.6e-10 66.6 62 54.8
QL04p018313 Quercus lobata HOM05D002949 ORTHO05D003151 8.6e-10 66.6 58 55.2
Sabra11G0029400 Salix brachista HOM05D002949 ORTHO05D003151 8.6e-10 66.6 62 54.8
Nn1g03898 Nelumbo nucifera HOM05D002949 ORTHO05D003151 1.1e-09 66.2 61 47.5
CSS0030314 Camellia sinensis var. sinensis HOM05D002949 ORTHO05D003151 1.5e-09 65.9 58 56.9
Thhalv10023716m.g Eutrema salsugineum HOM05D002949 ORTHO05D003151 1.5e-09 65.9 73 56.2
unitig_21.g20225 Utricularia gibba HOM05D002949 ORTHO05D003151 2.5e-09 65.1 58 53.4
Aqoxy1G03877 Aquilegia oxysepala HOM05D002949 ORTHO05D003151 3.3e-09 64.7 56 55.4
CAN.G289.27 Capsicum annuum HOM05D002949 ORTHO05D003151 3.3e-09 64.7 62 48.4
Eucgr.D00712 Eucalyptus grandis HOM05D002949 ORTHO05D003151 3.3e-09 64.7 58 55.2
Sc17g0006630 Simmondsia chinensis HOM05D002949 ORTHO05D003151 3.3e-09 64.7 69 49.3
CARHR011490 Cardamine hirsuta HOM05D002949 ORTHO05D003151 4.3e-09 64.3 47 63.8
Lj4g0021109 Lotus japonicus HOM05D002949 ORTHO05D003151 4.3e-09 64.3 63 49.2
FvH4_3g04020 Fragaria vesca HOM05D002949 ORTHO05D003151 5.6e-09 63.9 56 53.6
FAN11G3871 Fragaria x ananassa HOM05D002949 ORTHO05D003151 5.6e-09 63.9 56 53.6
FAN21G3300 Fragaria x ananassa HOM05D002949 ORTHO05D003151 5.6e-09 63.9 56 53.6
FAN25G2238 Fragaria x ananassa HOM05D002949 ORTHO05D003151 5.6e-09 63.9 56 53.6
Gohir.A05G165700 Gossypium hirsutum HOM05D002949 ORTHO05D003151 5.6e-09 63.9 80 41.2
Gohir.D05G168700 Gossypium hirsutum HOM05D002949 ORTHO05D003151 5.6e-09 63.9 80 43.8
Gorai.009G173900 Gossypium raimondii HOM05D002949 ORTHO05D003151 5.6e-09 63.9 80 43.8
RcHm_v2.0_Chr5g0006321 Rosa chinensis HOM05D002949 ORTHO05D003151 5.6e-09 63.9 56 58.9
SalBow8G4484 Salvia bowleyana HOM05D002949 ORTHO05D003151 5.6e-09 63.9 64 54.7
Cpa.g.sc2820.1 Carica papaya HOM05D002949 ORTHO05D003151 7.3e-09 63.5 62 54.8
CiPaw.09G158000 Carya illinoinensis HOM05D002949 ORTHO05D003151 7.3e-09 63.5 62 56.5
Haze_06573 Corylus avellana HOM05D002949 ORTHO05D003151 7.3e-09 63.5 61 55.7
Actinidia24059 Actinidia chinensis HOM05D002949 ORTHO05D003151 9.5e-09 63.2 61 55.7
A06p07910 Brassica napus HOM05D002949 ORTHO05D003151 9.5e-09 63.2 71 49.3
BraA06t23991Z Brassica rapa HOM05D002949 ORTHO05D003151 9.5e-09 63.2 71 49.3
Ciclev10016832m.g Citrus clementina HOM05D002949 ORTHO05D003151 9.5e-09 63.2 62 56.5
Oeu063388.1 Olea europaea HOM05D002949 ORTHO05D003151 9.5e-09 63.2 75 49.3
Potri.004G034400 Populus trichocarpa HOM05D002949 ORTHO05D003151 9.5e-09 63.2 62 54.8
Prupe.4G036800 Prunus persica HOM05D002949 ORTHO05D003151 9.5e-09 63.2 73 46.6
AL7G32540 Arabidopsis lyrata HOM05D002949 ORTHO05D003151 1.6e-08 62.4 85 41.2
BraA01t03153Z Brassica rapa HOM05D002949 ORTHO05D003151 1.6e-08 62.4 48 62.5
DCAR_008070 Daucus carota HOM05D002949 ORTHO05D003151 1.6e-08 62.4 76 47.4
Duzib160G0394 Durio zibethinus HOM05D002949 ORTHO05D003151 1.6e-08 62.4 58 53.4
Duzib192G0121 Durio zibethinus HOM05D002949 ORTHO05D003151 1.6e-08 62.4 58 53.4
MD05G1325400 Malus domestica HOM05D002949 ORTHO05D003151 1.6e-08 62.4 55 50.9
vmacro15865 Vaccinium macrocarpon HOM05D002949 ORTHO05D003151 1.6e-08 62.4 45 60.0
AT4G21510 Arabidopsis thaliana HOM05D002949 ORTHO05D003151 2.1e-08 62.0 85 43.5
Sabra04G0020200 Salix brachista HOM05D002949 ORTHO05D003151 2.1e-08 62.0 62 51.6
unitig_749.g13642 Utricularia gibba HOM05D002949 ORTHO05D003151 2.1e-08 62.0 36 66.7
Aa31LG2G9330 Aethionema arabicum HOM05D002949 ORTHO05D003151 2.8e-08 61.6 74 48.6
COL.COLO4_31585 Corchorus olitorius HOM05D002949 ORTHO05D003151 2.8e-08 61.6 58 51.7
Thhalv10009722m.g Eutrema salsugineum HOM05D002949 ORTHO05D003151 2.8e-08 61.6 57 54.4
SGA_v2.0_scaffold739G53543 Striga asiatica HOM05D002949 ORTHO05D003151 2.8e-08 61.6 59 55.9
Actinidia05572 Actinidia chinensis HOM05D002949 ORTHO05D003151 3.6e-08 61.2 63 50.8
Actinidia11808 Actinidia chinensis HOM05D002949 ORTHO05D003151 3.6e-08 61.2 61 50.8
TWI38G1709 Tripterygium wilfordii HOM05D002949 ORTHO05D003151 3.6e-08 61.2 65 44.6
BcaC05g25001 Brassica carinata HOM05D002949 ORTHO05D003151 4.7e-08 60.8 73 45.2
MELO3C007321.2 Cucumis melo HOM05D002949 ORTHO05D003151 4.7e-08 60.8 62 53.2
CsaV3_6G049750 Cucumis sativus L. HOM05D002949 ORTHO05D003151 4.7e-08 60.8 62 51.6
Sed0028194 Sechium edule HOM05D002949 ORTHO05D003151 4.7e-08 60.8 36 80.6
BcaNung04468 Brassica carinata HOM05D002949 ORTHO05D003151 6.2e-08 60.5 80 42.5
C05p09520 Brassica napus HOM05D002949 ORTHO05D003151 6.2e-08 60.5 80 42.5
BolC5t29694H Brassica oleracea HOM05D002949 ORTHO05D003151 6.2e-08 60.5 80 42.5
CARHR228170 Cardamine hirsuta HOM05D002949 ORTHO05D003151 6.2e-08 60.5 58 53.4
DCAR_028132 Daucus carota HOM05D002949 ORTHO05D003151 6.2e-08 60.5 70 50.0
MBI02_g06001_MAGBIO Magnolia biondii HOM05D002949 ORTHO05D003151 6.2e-08 60.5 72 40.3
RcHm_v2.0_Chr2g0138281 Rosa chinensis HOM05D002949 ORTHO05D003151 6.2e-08 60.5 56 55.4
BcaC06g31841 Brassica carinata HOM05D002949 ORTHO05D003151 8.1e-08 60.1 47 61.7
C01p38310 Brassica napus HOM05D002949 ORTHO05D003151 8.1e-08 60.1 46 63.0
Carub.0007s1991 Capsella rubella HOM05D002949 ORTHO05D003151 8.1e-08 60.1 85 43.5
Gohir.A09G070900 Gossypium hirsutum HOM05D002949 ORTHO05D003151 8.1e-08 60.1 63 46.0
Sed0023614 Sechium edule HOM05D002949 ORTHO05D003151 8.1e-08 60.1 62 48.4
Thecc.06G199500 Theobroma cacao HOM05D002949 ORTHO05D003151 8.1e-08 60.1 65 50.8
unitig_744.g24531 Utricularia gibba HOM05D002949 ORTHO05D003151 8.1e-08 60.1 58 51.7
Actinidia26996 Actinidia chinensis HOM05D002949 ORTHO05D003151 1.1e-07 59.7 63 49.2
A01p30160 Brassica napus HOM05D002949 ORTHO05D003151 1.1e-07 59.7 46 63.0
Carub.0002s0383 Capsella rubella HOM05D002949 ORTHO05D003151 1.1e-07 59.7 47 61.7
PSO541G5210 Papaver somniferum HOM05D002949 ORTHO05D003151 1.1e-07 59.7 59 50.8
PSO675G0167 Papaver somniferum HOM05D002949 ORTHO05D003151 1.1e-07 59.7 59 50.8
BcaB04g20333 Brassica carinata HOM05D002949 ORTHO05D003151 1.4e-07 59.3 62 54.8
TAR629G2049 Trochodendron aralioides HOM05D002949 ORTHO05D003151 1.4e-07 59.3 55 50.9
A03p66760 Brassica napus HOM05D002949 ORTHO05D003151 1.8e-07 58.9 65 46.2
BraA01t02804Z Brassica rapa HOM05D002949 ORTHO05D003151 1.8e-07 58.9 65 46.2
Gohir.D10G021700 Gossypium hirsutum HOM05D002949 ORTHO05D003151 1.8e-07 58.9 82 39.0
Gorai.011G022800 Gossypium raimondii HOM05D002949 ORTHO05D003151 1.8e-07 58.9 82 39.0
THA.LOC104819031 Tarenaya hassleriana HOM05D002949 ORTHO05D003151 1.8e-07 58.9 63 49.2
Gohir.A10G020900 Gossypium hirsutum HOM05D002949 ORTHO05D003151 2.4e-07 58.5 78 39.7
BolC1t03793H Brassica oleracea HOM05D002949 ORTHO05D003151 3.1e-07 58.2 44 65.9
Carub.0001s1084 Capsella rubella HOM05D002949 ORTHO05D003151 3.1e-07 58.2 43 60.5
Glyma.13G246200 Glycine max HOM05D002949 ORTHO05D003151 3.1e-07 58.2 75 40.0
TAR626G0808 Trochodendron aralioides HOM05D002949 ORTHO05D003151 3.1e-07 58.2 36 66.7
AT1G61340 Arabidopsis thaliana HOM05D002949 ORTHO05D003151 4.0e-07 57.8 47 59.6
BcaNung02792 Brassica carinata HOM05D002949 ORTHO05D003151 4.0e-07 57.8 82 41.5
BolC1t01498H Brassica oleracea HOM05D002949 ORTHO05D003151 4.0e-07 57.8 82 41.5
Lsat_1_v5_gn_7_19621 Lactuca sativa HOM05D002949 ORTHO05D003151 4.0e-07 57.8 78 44.9
Phvul.006G192100 Phaseolus vulgaris HOM05D002949 ORTHO05D003151 4.0e-07 57.8 62 48.4
SpUn0889_0010 Schrenkiella parvula HOM05D002949 ORTHO05D003151 4.0e-07 57.8 54 53.7
AL2G14990 Arabidopsis lyrata HOM05D002949 ORTHO05D003151 5.2e-07 57.4 47 59.6
Nn1g06760 Nelumbo nucifera HOM05D002949 ORTHO05D003151 5.2e-07 57.4 37 64.9
Nitab4.5_0003465g0090 Nicotiana tabacum HOM05D002949 ORTHO05D003151 5.2e-07 57.4 61 47.5
THA.LOC104806276 Tarenaya hassleriana HOM05D002949 ORTHO05D003151 5.2e-07 57.4 53 52.8
C04p27250 Brassica napus HOM05D002949 ORTHO05D003151 6.8e-07 57.0 47 59.6
BolC4t24257H Brassica oleracea HOM05D002949 ORTHO05D003151 6.8e-07 57.0 47 59.6
ECA236G1522 Erigeron canadensis HOM05D002949 ORTHO05D003151 6.8e-07 57.0 64 46.9
Nitab4.5_0012269g0020 Nicotiana tabacum HOM05D002949 ORTHO05D003151 6.8e-07 57.0 70 44.3
PSO832G3488 Papaver somniferum HOM05D002949 ORTHO05D003151 6.8e-07 57.0 75 41.3
THA.LOC104809546 Tarenaya hassleriana HOM05D002949 ORTHO05D003151 6.8e-07 57.0 55 52.7
Atru.chr10.2010 Acer truncatum HOM05D002949 ORTHO05D003151 8.9e-07 56.6 62 51.6
CARHR051300 Cardamine hirsuta HOM05D002949 ORTHO05D003151 8.9e-07 56.6 46 58.7
Gorai.006G085400 Gossypium raimondii HOM05D002949 ORTHO05D003151 8.9e-07 56.6 57 47.4
Hund23608 Selenicereus undatus HOM05D002949 ORTHO05D003151 8.9e-07 56.6 50 56.0
PGSC0003DMG400005038 Solanum tuberosum HOM05D002949 ORTHO05D003151 1.2e-06 56.2 58 43.1
Ah.09g236130 Amaranthus hybridus HOM05D002949 ORTHO05D003151 1.5e-06 55.8 63 50.8
EL10Ac8g20529 Beta vulgaris HOM05D002949 ORTHO05D003151 1.5e-06 55.8 74 40.5
A01p12820 Brassica napus HOM05D002949 ORTHO05D003151 1.5e-06 55.8 82 41.5
C01p15440 Brassica napus HOM05D002949 ORTHO05D003151 1.5e-06 55.8 82 41.5
BraA01t01226Z Brassica rapa HOM05D002949 ORTHO05D003151 1.5e-06 55.8 82 41.5
HanXRQChr05g0131241 Helianthus annuus HOM05D002949 ORTHO05D003151 1.5e-06 55.8 54 50.0
HanXRQChr16g0502961 Helianthus annuus HOM05D002949 ORTHO05D003151 1.5e-06 55.8 60 45.0
Manes.16G020700 Manihot esculenta HOM05D002949 ORTHO05D003151 1.5e-06 55.8 62 46.8
PSO210G1336 Papaver somniferum HOM05D002949 ORTHO05D003151 1.5e-06 55.8 75 40.0
arahy.Tifrunner.gnm1.ann1.5AX3QQ Arachis hypogaea HOM05D002949 ORTHO05D003151 2.0e-06 55.5 74 43.2
BcaNung02793 Brassica carinata HOM05D002949 ORTHO05D003151 2.0e-06 55.5 82 39.0
GSVIVG01003193001 Vitis vinifera HOM05D007484 ORTHO05D003151 2.0e-06 55.5 36 69.4
BcaC02g10579 Brassica carinata HOM05D002949 ORTHO05D003151 2.6e-06 55.1 47 57.4
AUR62016898 Chenopodium quinoa HOM05D002949 ORTHO05D003151 2.6e-06 55.1 74 40.5
Lsat_1_v5_gn_4_57061 Lactuca sativa HOM05D002949 ORTHO05D003151 2.6e-06 55.1 73 42.5
TAR629G1201 Trochodendron aralioides HOM05D002949 ORTHO05D003151 2.6e-06 55.1 59 49.2
VMungo0540G1141 Vigna mungo HOM05D002949 ORTHO05D003151 2.6e-06 55.1 62 46.8
arahy.Tifrunner.gnm1.ann1.HD6LCK Arachis hypogaea HOM05D002949 ORTHO05D003151 3.4e-06 54.7 74 41.9
THA.LOC104812725 Tarenaya hassleriana HOM05D002949 ORTHO05D003151 3.4e-06 54.7 53 49.1
Rhsim02G0119700 Rhododendron simsii HOM05D002949 ORTHO05D003151 4.4e-06 54.3 61 44.3
Sopen03g002650 Solanum pennellii HOM05D002949 ORTHO05D003151 4.4e-06 54.3 56 41.1
Gohir.D09G070700 Gossypium hirsutum HOM05D002949 ORTHO05D003151 5.8e-06 53.9 57 45.6
Sp2g03160 Schrenkiella parvula HOM05D002949 ORTHO05D003151 5.8e-06 53.9 45 57.8
GSVIVG01003188001 Vitis vinifera HOM05D002949 ORTHO05D003151 5.8e-06 53.9 36 66.7
Lj6g0014531 Lotus japonicus HOM05D002949 ORTHO05D003151 7.6e-06 53.5 60 45.0
Lalb_Chr18g0057181 Lupinus albus HOM05D002949 ORTHO05D003151 7.6e-06 53.5 64 46.9
HanXRQChr16g0517451 Helianthus annuus HOM05D002949 ORTHO05D003151 9.9e-06 53.1 36 63.9
Lalb_Chr20g0122281 Lupinus albus HOM05D002949 ORTHO05D003151 9.9e-06 53.1 63 44.4


User provided reference genes

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