Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu018469.1 Olea europaea HOM05D003537 ORTHO05D004180 2.6e-60 235.3 130 100.0
Oeu007500.1 Olea europaea HOM05D003537 ORTHO05D004180 2.0e-44 182.6 132 81.1
MSTRG.21979 Avicennia marina HOM05D003537 ORTHO05D004180 2.3e-32 142.5 118 57.6
Peaxi162Scf00157g01525 Petunia axillaris HOM05D003537 ORTHO05D004180 6.6e-32 141.0 132 61.4
Actinidia40471 Actinidia chinensis HOM05D003537 ORTHO05D004180 1.1e-31 140.2 132 51.5
SGA_v2.0_scaffold12G06124 Striga asiatica HOM05D003537 ORTHO05D004180 2.5e-31 139.0 142 50.0
Duzib150G0412 Durio zibethinus HOM05D003537 ORTHO05D004180 5.6e-31 137.9 132 53.0
Actinidia21987 Actinidia chinensis HOM05D003537 ORTHO05D004180 9.5e-31 137.1 135 50.4
Cc06_g08500 Coffea canephora HOM05D003537 ORTHO05D004180 3.6e-30 135.2 133 50.4
Nitab4.5_0010481g0030 Nicotiana tabacum HOM05D003537 ORTHO05D004180 3.6e-30 135.2 134 55.2
Nitab4.5_0002658g0060 Nicotiana tabacum HOM05D003537 ORTHO05D004180 8.1e-30 134.0 134 50.7
QL10p023445 Quercus lobata HOM05D003537 ORTHO05D004180 2.3e-29 132.5 131 48.9
CiPaw.04G171200 Carya illinoinensis HOM05D003537 ORTHO05D004180 6.8e-29 131.0 137 50.4
Atru.chr7.1160 Acer truncatum HOM05D003537 ORTHO05D004180 1.2e-28 130.2 132 59.8
Gohir.D06G054550 Gossypium hirsutum HOM05D003537 ORTHO05D004180 2.0e-28 129.4 132 52.3
Gohir.A06G055900 Gossypium hirsutum HOM05D003537 ORTHO05D004180 2.6e-28 129.0 132 51.5
PGR142G2689 Punica granatum HOM05D003537 ORTHO05D004180 2.6e-28 129.0 132 47.7
TWI34G1168 Tripterygium wilfordii HOM05D003537 ORTHO05D004180 2.6e-28 129.0 132 59.8
Gohir.D13G205100 Gossypium hirsutum HOM05D003537 ORTHO05D004180 5.8e-28 127.9 132 47.7
Gorai.013G234000 Gossypium raimondii HOM05D003537 ORTHO05D004180 5.8e-28 127.9 132 47.7
Cpa.g.sc75.27 Carica papaya HOM05D003537 ORTHO05D004180 9.9e-28 127.1 132 49.2
Migut.K00479 Erythranthe guttata HOM05D003537 ORTHO05D004180 1.3e-27 126.7 134 48.5
Solyc12g009440.2 Solanum lycopersicum HOM05D003537 ORTHO05D004180 1.3e-27 126.7 134 60.4
Sopen12g004440 Solanum pennellii HOM05D003537 ORTHO05D004180 2.2e-27 125.9 134 60.4
Cfa003377 Carpinus fangiana HOM05D003537 ORTHO05D004180 2.9e-27 125.6 132 57.6
Glyma.04G147800 Glycine max HOM05D003537 ORTHO05D004180 2.9e-27 125.6 132 59.8
Gohir.A13G199600 Gossypium hirsutum HOM05D003537 ORTHO05D004180 2.9e-27 125.6 132 48.5
Nn2g12030 Nelumbo nucifera HOM05D003537 ORTHO05D004180 6.4e-27 124.4 133 58.6
TAR625G0117 Trochodendron aralioides HOM05D003537 ORTHO05D004180 8.3e-27 124.0 132 54.5
Glyma.17G114800 Glycine max HOM05D003537 ORTHO05D004180 3.2e-26 122.1 134 44.8
Manes.14G132200 Manihot esculenta HOM05D003537 ORTHO05D004180 4.1e-26 121.7 134 53.7
Haze_25576 Corylus avellana HOM05D003537 ORTHO05D004180 7.1e-26 120.9 132 44.7
CsaV3_2G002870 Cucumis sativus L. HOM05D003537 ORTHO05D004180 9.2e-26 120.6 138 46.4
Rhsim01G0071100 Rhododendron simsii HOM05D003537 ORTHO05D004180 1.2e-25 120.2 133 58.6
THA.LOC104815279 Tarenaya hassleriana HOM05D003537 ORTHO05D004180 2.7e-25 119.0 135 63.0
Dinv41510 Davidia involucrata HOM05D003537 ORTHO05D004180 3.5e-25 118.6 132 54.5
Migut.K00478 Erythranthe guttata HOM05D003537 ORTHO05D004180 4.6e-25 118.2 122 52.5
arahy.Tifrunner.gnm1.ann1.F0XIJD Arachis hypogaea HOM05D003537 ORTHO05D004180 6.0e-25 117.9 134 47.0
arahy.Tifrunner.gnm1.ann1.P86YY0 Arachis hypogaea HOM05D003537 ORTHO05D004180 6.0e-25 117.9 134 47.0
Hma1.2p1_0018F.1_g012400 Hydrangea macrophylla HOM05D003537 ORTHO05D004180 6.0e-25 117.9 144 44.4
TWI63G0509 Tripterygium wilfordii HOM05D003537 ORTHO05D004180 6.0e-25 117.9 132 50.0
Gorai.010G063900 Gossypium raimondii HOM05D003537 ORTHO05D004180 7.8e-25 117.5 132 47.7
Ciclev10009876m.g Citrus clementina HOM05D003537 ORTHO05D004180 1.0e-24 117.1 131 46.6
SalBow1G5494 Salvia bowleyana HOM05D003537 ORTHO05D004180 1.3e-24 116.7 104 55.8
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 2.3e-24 115.9 110 64.5
ECA240G1743 Erigeron canadensis HOM05D003537 ORTHO05D004180 3.9e-24 115.2 136 52.9
Prupe.7G243100 Prunus persica HOM05D003537 ORTHO05D004180 6.6e-24 114.4 132 56.8
Nn8g39452 Nelumbo nucifera HOM05D003537 ORTHO05D004180 1.1e-23 113.6 132 54.5
Manes.06G058601 Manihot esculenta HOM05D003537 ORTHO05D004180 1.9e-23 112.8 130 42.3
vmacro20557 Vaccinium macrocarpon HOM05D003537 ORTHO05D004180 2.5e-23 112.5 133 56.4
Ca_21681_v3 Cicer arietinum L. HOM05D003537 ORTHO05D004180 3.3e-23 112.1 133 43.6
Glyma.13G167200 Glycine max HOM05D003537 ORTHO05D004180 4.3e-23 111.7 132 40.9
Sed0005083 Sechium edule HOM05D003537 ORTHO05D004180 4.3e-23 111.7 138 48.6
FvH4_1g03260 Fragaria vesca HOM05D003537 ORTHO05D004180 7.3e-23 110.9 130 53.1
FAN19G1671 Fragaria x ananassa HOM05D003537 ORTHO05D004180 7.3e-23 110.9 130 53.1
RcHm_v2.0_Chr2g0088401 Rosa chinensis HOM05D003537 ORTHO05D004180 7.3e-23 110.9 130 50.0
Medtr4g114180 Medicago truncatula HOM05D003537 ORTHO05D004180 9.5e-23 110.5 129 43.4
AL5G26940 Arabidopsis lyrata HOM05D003537 ORTHO05D004180 1.2e-22 110.2 140 45.7
Lalb_Chr07g0178961 Lupinus albus HOM05D003537 ORTHO05D004180 1.2e-22 110.2 133 53.4
RhsimUnG0194700 Rhododendron simsii HOM05D003537 ORTHO05D004180 1.2e-22 110.2 114 61.4
Eucgr.C01175 Eucalyptus grandis HOM05D003537 ORTHO05D004180 1.6e-22 109.8 113 44.2
QL02p021910 Quercus lobata HOM05D003537 ORTHO05D004180 1.6e-22 109.8 131 46.6
FAN28G2448 Fragaria x ananassa HOM05D003537 ORTHO05D004180 2.1e-22 109.4 130 53.1
Thecc.09G126600 Theobroma cacao HOM05D003537 ORTHO05D004180 2.1e-22 109.4 132 45.5
THA.LOC104808988 Tarenaya hassleriana HOM05D003537 ORTHO05D004180 3.6e-22 108.6 133 49.6
ClCG11G003050 Citrullus lanatus HOM05D003537 ORTHO05D004180 4.7e-22 108.2 138 50.7
Sp5g14270 Schrenkiella parvula HOM05D003537 ORTHO05D004180 4.7e-22 108.2 139 54.0
FAN23G0028 Fragaria x ananassa HOM05D003537 ORTHO05D004180 6.2e-22 107.8 128 43.0
Phvul.003G164500 Phaseolus vulgaris HOM05D003537 ORTHO05D004180 6.2e-22 107.8 133 51.9
TAR636G0369 Trochodendron aralioides HOM05D003537 ORTHO05D004180 6.2e-22 107.8 132 46.2
AT3G47650 Arabidopsis thaliana HOM05D003537 ORTHO05D004180 8.1e-22 107.5 140 55.0
CDE06G2093 Ceratophyllum demersum HOM05D003537 ORTHO05D004180 8.1e-22 107.5 123 56.9
HPP92_000667 Vanilla planifolia HOM05D003537 ORTHO05D004180 8.1e-22 107.5 90 70.0
arahy.Tifrunner.gnm1.ann1.9FI3T7 Arachis hypogaea HOM05D003537 ORTHO05D004180 1.1e-21 107.1 114 49.1
arahy.Tifrunner.gnm1.ann1.DMU7Q7 Arachis hypogaea HOM05D003537 ORTHO05D004180 1.1e-21 107.1 114 49.1
A01p25800 Brassica napus HOM05D003537 ORTHO05D004180 1.1e-21 107.1 139 54.7
BraA01t02496Z Brassica rapa HOM05D003537 ORTHO05D004180 1.1e-21 107.1 139 54.7
Glyma.06G222000 Glycine max HOM05D003537 ORTHO05D004180 1.4e-21 106.7 129 53.5
Potri.018G068300 Populus trichocarpa HOM05D003537 ORTHO05D004180 1.8e-21 106.3 125 46.4
unitig_26.g9662 Utricularia gibba HOM05D003537 ORTHO05D004180 1.8e-21 106.3 139 42.4
arahy.Tifrunner.gnm1.ann1.4IXQ36 Arachis hypogaea HOM05D003537 ORTHO05D004180 3.1e-21 105.5 127 47.2
arahy.Tifrunner.gnm1.ann1.EPB35R Arachis hypogaea HOM05D003537 ORTHO05D004180 3.1e-21 105.5 127 47.2
Duzib168G0240 Durio zibethinus HOM05D003537 ORTHO05D004180 5.2e-21 104.8 110 50.0
MD15G1173100 Malus domestica HOM05D003537 ORTHO05D004180 5.2e-21 104.8 124 54.0
BcaB01g00893 Brassica carinata HOM05D003537 ORTHO05D004180 2.0e-20 102.8 86 54.7
A06p19950 Brassica napus HOM05D003537 ORTHO05D004180 2.0e-20 102.8 86 72.1
BraA06t25078Z Brassica rapa HOM05D003537 ORTHO05D004180 2.0e-20 102.8 86 72.1
Lsat_1_v5_gn_7_45281 Lactuca sativa HOM05D003537 ORTHO05D004180 2.0e-20 102.8 131 45.0
GSVIVG01015532001 Vitis vinifera HOM05D003537 ORTHO05D004180 2.0e-20 102.8 133 42.9
AUR62011130 Chenopodium quinoa HOM05D003537 ORTHO05D004180 4.4e-20 101.7 93 69.9
Ciclev10009875m.g Citrus clementina HOM05D003537 ORTHO05D004180 5.8e-20 101.3 132 50.8
CANSAT11G2285 Cannabis sativa HOM05D003537 ORTHO05D004180 7.6e-20 100.9 136 41.2
Gohir.A06G143050 Gossypium hirsutum HOM05D003537 ORTHO05D004180 7.6e-20 100.9 91 53.8
Aqoxy7G02181 Aquilegia oxysepala HOM05D003537 ORTHO05D004180 9.9e-20 100.5 135 55.6
CDE04G0424 Ceratophyllum demersum HOM05D003537 ORTHO05D004180 9.9e-20 100.5 123 56.1
AUR62013357 Chenopodium quinoa HOM05D003537 ORTHO05D004180 9.9e-20 100.5 91 70.3
Lj4g0026965 Lotus japonicus HOM05D003537 ORTHO05D004180 9.9e-20 100.5 133 39.8
MD02G1031600 Malus domestica HOM05D003537 ORTHO05D004180 9.9e-20 100.5 132 42.4
BcaC01g01786 Brassica carinata HOM05D003537 ORTHO05D004180 1.3e-19 100.1 86 70.9
A06p27250 Brassica napus HOM05D003537 ORTHO05D004180 1.3e-19 100.1 93 67.7
MBI01_g36269_MAGBIO Magnolia biondii HOM05D003537 ORTHO05D004180 1.3e-19 100.1 137 54.0
COL.COLO4_18845 Corchorus olitorius HOM05D003537 ORTHO05D004180 2.2e-19 99.4 89 50.6
Lalb_Chr13g0301861 Lupinus albus HOM05D003537 ORTHO05D004180 2.9e-19 99.0 135 52.6
Psat4g040120 Pisum sativum HOM05D003537 ORTHO05D004180 3.8e-19 98.6 134 44.8
Ah.14g079820 Amaranthus hybridus HOM05D003537 ORTHO05D004180 4.9e-19 98.2 136 41.2
EL10Ac8g18657 Beta vulgaris HOM05D003537 ORTHO05D004180 4.9e-19 98.2 133 41.4
Thhalv10010812m.g Eutrema salsugineum HOM05D003537 ORTHO05D004180 4.9e-19 98.2 141 55.3
Potri.018G028500 Populus trichocarpa HOM05D003537 ORTHO05D004180 6.4e-19 97.8 103 61.2
CANSAT25G1571 Cannabis sativa HOM05D003537 ORTHO05D004180 1.1e-18 97.1 139 41.0
Sabra18G0030700 Salix brachista HOM05D003537 ORTHO05D004180 1.4e-18 96.7 84 69.0
SGA_v2.0_scaffold17G08031 Striga asiatica HOM05D003537 ORTHO05D004180 1.9e-18 96.3 80 55.0
VMungo1215G2386 Vigna mungo HOM05D003537 ORTHO05D004180 2.4e-18 95.9 134 50.7
HanXRQChr16g0505371 Helianthus annuus HOM05D003537 ORTHO05D004180 7.1e-18 94.4 92 52.2
Eucgr.C02783 Eucalyptus grandis HOM05D003537 ORTHO05D004180 9.2e-18 94.0 87 57.5
Lsat_1_v5_gn_8_58621 Lactuca sativa HOM05D003537 ORTHO05D004180 1.6e-17 93.2 99 46.5
TPR.G10724 Trifolium pratense HOM05D003537 ORTHO05D004180 1.6e-17 93.2 144 36.8
BolC1t03207H Brassica oleracea HOM05D003537 ORTHO05D004180 2.1e-17 92.8 139 51.1
Aa31LG8G16720 Aethionema arabicum HOM05D003537 ORTHO05D004180 4.6e-17 91.7 89 49.4
Mapoly0035s0118 Marchantia polymorpha HOM05D002896 ORTHO05D003263 7.8e-17 90.9 75 65.3
Thecc.09G026400 Theobroma cacao HOM05D003537 ORTHO05D004180 7.8e-17 90.9 134 50.0
Carub.0005s1378 Capsella rubella HOM05D003537 ORTHO05D004180 1.0e-16 90.5 148 51.4
BcaB05g23065 Brassica carinata HOM05D003537 ORTHO05D004180 1.3e-16 90.1 139 49.6
CARHR156330 Cardamine hirsuta HOM05D003537 ORTHO05D004180 1.3e-16 90.1 141 46.1
CiPaw.08G011800 Carya illinoinensis HOM05D003537 ORTHO05D004180 3.9e-16 88.6 132 51.5
BcaC09g49812 Brassica carinata HOM05D003537 ORTHO05D004180 5.1e-16 88.2 139 49.6
C01p32690 Brassica napus HOM05D003537 ORTHO05D004180 5.1e-16 88.2 139 49.6
BraA06t25666Z Brassica rapa HOM05D003537 ORTHO05D004180 5.1e-16 88.2 129 52.7
PSO455G0045 Papaver somniferum HOM05D003537 ORTHO05D004180 5.1e-16 88.2 135 39.3
BcaC01g02287 Brassica carinata HOM05D003537 ORTHO05D004180 6.6e-16 87.8 105 47.6
Haze_21529 Corylus avellana HOM05D003537 ORTHO05D004180 6.6e-16 87.8 105 43.8
ClCG05G016980 Citrullus lanatus HOM05D003537 ORTHO05D004180 8.7e-16 87.4 125 44.0
VMungo1309G0037 Vigna mungo HOM05D003537 ORTHO05D004180 8.7e-16 87.4 130 39.2
Dinv18245 Davidia involucrata HOM05D003537 ORTHO05D004180 1.5e-15 86.7 120 48.3
GSVIVG01035845001 Vitis vinifera HOM05D003537 ORTHO05D004180 3.3e-15 85.5 134 53.0
Gorai.010G114400 Gossypium raimondii HOM05D003537 ORTHO05D004180 4.3e-15 85.1 138 38.4
Os06g0332800 Oryza sativa ssp. japonica HOM05D003537 ORTHO05D004180 5.6e-15 84.7 94 58.5
Peaxi162Scf00256g00035 Petunia axillaris HOM05D003537 ORTHO05D004180 5.6e-15 84.7 107 43.0
Pp3c18_21980 Physcomitrium patens HOM05D003537 ORTHO05D004180 5.6e-15 84.7 77 50.6
ECA246G5170 Erigeron canadensis HOM05D003537 ORTHO05D004180 7.3e-15 84.3 88 48.9
PSO170G5454 Papaver somniferum HOM05D003537 ORTHO05D004180 7.3e-15 84.3 138 38.4
ATR1120G202 Amborella trichopoda HOM05D003537 ORTHO05D004180 9.6e-15 84.0 80 47.5
C03p71880 Brassica napus HOM05D003537 ORTHO05D004180 9.6e-15 84.0 86 64.0
MELO3C004506.2 Cucumis melo HOM05D003537 ORTHO05D004180 9.6e-15 84.0 151 35.8
CsaV3_3G046470 Cucumis sativus L. HOM05D003537 ORTHO05D004180 9.6e-15 84.0 107 42.1
Gohir.A06G098204 Gossypium hirsutum HOM05D003537 ORTHO05D004180 1.3e-14 83.6 134 38.1
RcHm_v2.0_Chr6g0298061 Rosa chinensis HOM05D003537 ORTHO05D004180 1.3e-14 83.6 118 50.0
TPR.G3106 Trifolium pratense HOM05D003537 ORTHO05D004180 1.3e-14 83.6 77 57.1
Hund09242 Selenicereus undatus HOM05D003537 ORTHO05D004180 1.6e-14 83.2 77 63.6
Medtr3g107397 Medicago truncatula HOM05D003537 ORTHO05D004180 2.1e-14 82.8 78 55.1
BcaB02g10692 Brassica carinata HOM05D003537 ORTHO05D004180 3.6e-14 82.0 86 60.5
Cpa.g.sc259.5 Carica papaya HOM05D003537 ORTHO05D004180 3.6e-14 82.0 110 53.6
Glyma.04G067500 Glycine max HOM05D003537 ORTHO05D004180 3.6e-14 82.0 83 67.5
Glyma.06G069100 Glycine max HOM05D003537 ORTHO05D004180 4.8e-14 81.6 94 60.6
Psat0s2233g0360 Pisum sativum HOM05D003537 ORTHO05D004180 4.8e-14 81.6 77 49.4
Dinv15950 Davidia involucrata HOM05D003537 ORTHO05D004180 6.2e-14 81.3 120 47.5
Sed0007274 Sechium edule HOM05D003537 ORTHO05D004180 8.1e-14 80.9 109 39.4
MD15G1124500 Malus domestica HOM05D003537 ORTHO05D004180 1.8e-13 79.7 77 49.4
Manes.16G121200 Manihot esculenta HOM05D003537 ORTHO05D004180 1.8e-13 79.7 89 60.7
vmacro23102 Vaccinium macrocarpon HOM05D003537 ORTHO05D004180 2.4e-13 79.3 83 66.3
Atru.BG.3.p Acer truncatum HOM05D003537 ORTHO05D004180 3.1e-13 79.0 68 50.0
CSS0014531 Camellia sinensis var. sinensis HOM05D003537 ORTHO05D004180 3.1e-13 79.0 89 41.6
Lalb_Chr08g0244061 Lupinus albus HOM05D003537 ORTHO05D004180 3.1e-13 79.0 137 44.5
Lj1g0012711 Lotus japonicus HOM05D003537 ORTHO05D004180 4.0e-13 78.6 90 45.6
SMO145G0190 Selaginella moellendorffii HOM05D003537 ORTHO05D004180 6.9e-13 77.8 69 49.3
Cc08_g00790 Coffea canephora HOM05D003537 ORTHO05D004180 9.0e-13 77.4 134 34.3
GSVIVG01015534001 Vitis vinifera HOM05D003537 ORTHO05D004180 9.0e-13 77.4 59 55.9
FvH4_2g29200 Fragaria vesca HOM05D003537 ORTHO05D004180 1.2e-12 77.0 118 49.2
FAN15G0527 Fragaria x ananassa HOM05D003537 ORTHO05D004180 1.2e-12 77.0 118 49.2
FAN27G1347 Fragaria x ananassa HOM05D003537 ORTHO05D004180 1.2e-12 77.0 118 49.2
HanXRQChr09g0242821 Helianthus annuus HOM05D003537 ORTHO05D004180 1.5e-12 76.6 118 50.0
PGR044G0105 Punica granatum HOM05D003537 ORTHO05D004180 1.5e-12 76.6 93 59.1
Prupe.1G480000 Prunus persica HOM05D003537 ORTHO05D004180 4.4e-12 75.1 97 51.5
FAN26G0344 Fragaria x ananassa HOM05D003537 ORTHO05D004180 7.6e-12 74.3 57 56.1
DCAR_003091 Daucus carota HOM05D003537 ORTHO05D004180 2.2e-11 72.8 79 43.0
SEGI_36836 Sequoiadendron giganteum HOM05D003537 ORTHO05D004180 1.9e-10 69.7 83 41.0
Gohir.D06G099500 Gossypium hirsutum HOM05D003537 ORTHO05D004180 4.2e-10 68.6 107 39.3
Gohir.D08G087900 Gossypium hirsutum HOM05D003537 ORTHO05D004180 4.6e-09 65.1 59 52.5
Lsat_1_v5_gn_5_30800 Lactuca sativa HOM05D003537 ORTHO05D004180 1.0e-08 63.9 59 54.2
FAN24G0346 Fragaria x ananassa HOM05D003537 ORTHO05D004180 1.3e-08 63.5 91 40.7
Gohir.A10G061300 Gossypium hirsutum HOM05D003537 ORTHO05D004180 3.0e-08 62.4 30 80.0
CSS0006865 Camellia sinensis var. sinensis HOM05D003537 ORTHO05D004180 4.3e-07 58.5 30 70.0
CSS0026750 Camellia sinensis var. sinensis HOM05D003537 ORTHO05D004180 4.3e-07 58.5 30 70.0
MELO3C030460.2 Cucumis melo HOM05D003537 ORTHO05D004180 1.3e-06 57.0 73 42.5


User provided reference genes

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