Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu018311.3 Olea europaea HOM05D004548 ORTHO05D005402 2.9e-146 521.9 275 100.0
Oeu018323.1 Olea europaea HOM05D004548 ORTHO05D005402 6.3e-40 168.7 160 62.5
Oeu058204.1 Olea europaea HOM05D004548 ORTHO05D005402 1.7e-29 134.0 208 47.1
Oeu058206.1 Olea europaea HOM05D004548 ORTHO05D005402 2.9e-29 133.3 208 47.1
vmacro04885 Vaccinium macrocarpon HOM05D004548 ORTHO05D005402 5.0e-21 105.9 170 43.5
Lj1A1122T48 Lonicera japonica HOM05D004548 ORTHO05D005402 1.4e-20 104.4 197 40.1
CiPaw.06G111100 Carya illinoinensis HOM05D004548 ORTHO05D005402 9.4e-20 101.7 208 38.5
Peaxi162Scf00235g00217 Petunia axillaris HOM05D004548 ORTHO05D005402 1.2e-19 101.3 216 38.0
Peaxi162Scf01242g00029 Petunia axillaris HOM05D004548 ORTHO05D005402 1.2e-19 101.3 206 38.8
GSVIVG01025270001 Vitis vinifera HOM05D004548 ORTHO05D005402 1.2e-19 101.3 200 40.0
Duzib187G0077 Durio zibethinus HOM05D004548 ORTHO05D005402 1.6e-19 100.9 196 36.7
Migut.N00675 Erythranthe guttata HOM05D004548 ORTHO05D005402 1.6e-19 100.9 211 35.5
Cfa019955 Carpinus fangiana HOM05D004548 ORTHO05D005402 6.1e-19 99.0 198 40.9
Eucgr.J01653 Eucalyptus grandis HOM05D004548 ORTHO05D005402 7.9e-19 98.6 195 36.4
Haze_12526 Corylus avellana HOM05D004548 ORTHO05D005402 1.0e-18 98.2 187 40.1
Sabra03G0116700 Salix brachista HOM05D004548 ORTHO05D005402 1.0e-18 98.2 170 42.4
Gohir.A09G002500 Gossypium hirsutum HOM05D004548 ORTHO05D005402 1.4e-18 97.8 197 40.1
Gohir.D09G002300 Gossypium hirsutum HOM05D004548 ORTHO05D005402 1.8e-18 97.4 201 39.8
Gorai.006G002800 Gossypium raimondii HOM05D004548 ORTHO05D005402 1.8e-18 97.4 201 39.8
Nitab4.5_0007144g0020 Nicotiana tabacum HOM05D004548 ORTHO05D005402 1.8e-18 97.4 205 38.0
Nitab4.5_0001348g0030 Nicotiana tabacum HOM05D004548 ORTHO05D005402 2.3e-18 97.1 209 39.2
PGSC0003DMG400027684 Solanum tuberosum HOM05D004548 ORTHO05D005402 2.3e-18 97.1 215 35.8
MSTRG.17963 Avicennia marina HOM05D004548 ORTHO05D005402 3.0e-18 96.7 217 35.0
Prupe.1G211800 Prunus persica HOM05D004548 ORTHO05D005402 3.9e-18 96.3 209 38.3
TAR374G1650 Trochodendron aralioides HOM05D004548 ORTHO05D005402 3.9e-18 96.3 197 38.1
Atru.chr12.1469 Acer truncatum HOM05D004548 ORTHO05D005402 5.1e-18 95.9 198 38.4
Aqoxy1G02233 Aquilegia oxysepala HOM05D004548 ORTHO05D005402 6.7e-18 95.5 203 39.4
Solyc06g082980.3 Solanum lycopersicum HOM05D004548 ORTHO05D005402 1.1e-17 94.7 215 34.9
Lsat_1_v5_gn_5_6480 Lactuca sativa HOM05D004548 ORTHO05D005402 1.5e-17 94.4 199 41.2
Lsat_1_v5_gn_8_83161 Lactuca sativa HOM05D004548 ORTHO05D005402 1.5e-17 94.4 199 41.2
SGA_v2.0_scaffold77G25307 Striga asiatica HOM05D004548 ORTHO05D005402 1.5e-17 94.4 213 34.3
SalBow3G2027 Salvia bowleyana HOM05D004548 ORTHO05D005402 2.6e-17 93.6 208 34.1
Manes.12G130500 Manihot esculenta HOM05D004548 ORTHO05D005402 3.3e-17 93.2 198 38.9
CAN.G874.37 Capsicum annuum HOM05D004548 ORTHO05D005402 4.4e-17 92.8 215 36.3
Sopen06g034370 Solanum pennellii HOM05D004548 ORTHO05D005402 5.7e-17 92.4 215 34.4
Thecc.01G240000 Theobroma cacao HOM05D004548 ORTHO05D005402 5.7e-17 92.4 197 36.5
Nn4g22076 Nelumbo nucifera HOM05D004548 ORTHO05D005402 7.4e-17 92.0 197 37.1
Potri.003G160500 Populus trichocarpa HOM05D004548 ORTHO05D005402 1.3e-16 91.3 197 37.6
PGR119G2305 Punica granatum HOM05D004548 ORTHO05D005402 1.3e-16 91.3 208 37.5
MD13G1133800 Malus domestica HOM05D004548 ORTHO05D005402 1.7e-16 90.9 200 37.5
MBI07_g42009_MAGBIO Magnolia biondii HOM05D004548 ORTHO05D005402 2.8e-16 90.1 197 34.0
TWI18G0021 Tripterygium wilfordii HOM05D004548 ORTHO05D005402 3.7e-16 89.7 207 37.2
Cc01_g15960 Coffea canephora HOM05D004548 ORTHO05D005402 4.8e-16 89.4 209 34.4
CSS0047568 Camellia sinensis var. sinensis HOM05D004548 ORTHO05D005402 6.3e-16 89.0 207 35.7
QL03p048368 Quercus lobata HOM05D004548 ORTHO05D005402 6.3e-16 89.0 204 37.7
HanXRQChr04g0124971 Helianthus annuus HOM05D004548 ORTHO05D005402 8.2e-16 88.6 197 38.6
COL.COLO4_06519 Corchorus olitorius HOM05D004548 ORTHO05D005402 1.1e-15 88.2 201 37.3
Hma1.2p1_0738F.1_g210920 Hydrangea macrophylla HOM05D004548 ORTHO05D005402 1.1e-15 88.2 213 34.3
Ciclev10029256m.g Citrus clementina HOM05D004548 ORTHO05D005402 1.8e-15 87.4 197 36.0
PSO541G3463 Papaver somniferum HOM05D004548 ORTHO05D005402 1.8e-15 87.4 205 35.6
CARHR020520 Cardamine hirsuta HOM05D004548 ORTHO05D005402 2.4e-15 87.0 202 37.1
BcaB03g14411 Brassica carinata HOM05D004548 ORTHO05D005402 4.1e-15 86.3 192 33.3
PSO675G5153 Papaver somniferum HOM05D004548 ORTHO05D005402 7.0e-15 85.5 205 35.1
BcaB03g14342 Brassica carinata HOM05D004548 ORTHO05D005402 9.1e-15 85.1 199 32.7
Glyma.09G186900 Glycine max HOM05D004548 ORTHO05D005402 9.1e-15 85.1 207 35.3
CANSAT80G0994 Cannabis sativa HOM05D004548 ORTHO05D005402 1.2e-14 84.7 205 36.1
ECA236G1448 Erigeron canadensis HOM05D004548 ORTHO05D005402 1.2e-14 84.7 196 36.7
ATR0665G198 Amborella trichopoda HOM05D004548 ORTHO05D005402 1.6e-14 84.3 194 34.5
Lj2g0001774 Lotus japonicus HOM05D004548 ORTHO05D005402 1.6e-14 84.3 197 35.0
Actinidia33989 Actinidia chinensis HOM05D004548 ORTHO05D005402 2.6e-14 83.6 208 37.0
PGR119G0727 Punica granatum HOM05D004548 ORTHO05D005402 5.9e-14 82.4 207 34.8
Rhsim12G0068000 Rhododendron simsii HOM05D004548 ORTHO05D005402 7.7e-14 82.0 198 36.4
Carub.0001s1957 Capsella rubella HOM05D004548 ORTHO05D005402 1.3e-13 81.3 208 33.7
SEGI_00448 Sequoiadendron giganteum HOM05D004548 ORTHO05D005402 1.3e-13 81.3 197 33.0
RcHm_v2.0_Chr4g0428441 Rosa chinensis HOM05D004548 ORTHO05D005402 1.7e-13 80.9 196 34.2
THA.LOC104807222 Tarenaya hassleriana HOM05D004548 ORTHO05D005402 2.9e-13 80.1 202 35.6
BcaB03g14416 Brassica carinata HOM05D004548 ORTHO05D005402 3.8e-13 79.7 210 31.4
Glyma.09G186800 Glycine max HOM05D004548 ORTHO05D005402 3.8e-13 79.7 209 34.9
BcaB07g32020 Brassica carinata HOM05D004548 ORTHO05D005402 5.0e-13 79.3 200 37.0
A07p16050 Brassica napus HOM05D004548 ORTHO05D005402 5.0e-13 79.3 205 33.2
ClCG07G012080 Citrullus lanatus HOM05D004548 ORTHO05D005402 5.0e-13 79.3 219 32.4
TPR.G38962 Trifolium pratense HOM05D004548 ORTHO05D005402 5.0e-13 79.3 200 34.5
BraA06t24724Z Brassica rapa HOM05D004548 ORTHO05D005402 6.5e-13 79.0 207 35.7
BraA07t29333Z Brassica rapa HOM05D004548 ORTHO05D005402 6.5e-13 79.0 205 33.2
Thhalv10008732m.g Eutrema salsugineum HOM05D004548 ORTHO05D005402 6.5e-13 79.0 208 33.7
BcaB03g14346 Brassica carinata HOM05D004548 ORTHO05D005402 8.5e-13 78.6 205 32.7
Sp1g17810 Schrenkiella parvula HOM05D004548 ORTHO05D005402 8.5e-13 78.6 208 33.2
AL1G32850 Arabidopsis lyrata HOM05D004548 ORTHO05D005402 1.1e-12 78.2 202 35.1
C07p23420 Brassica napus HOM05D004548 ORTHO05D005402 1.5e-12 77.8 205 32.2
BolC7t42875H Brassica oleracea HOM05D004548 ORTHO05D005402 1.5e-12 77.8 205 32.2
BolC5t30565H Brassica oleracea HOM05D004548 ORTHO05D005402 2.5e-12 77.0 197 35.0
CDE04G3258 Ceratophyllum demersum HOM05D004548 ORTHO05D005402 3.2e-12 76.6 207 33.3
FvH4_4g22210 Fragaria vesca HOM05D004548 ORTHO05D005402 3.2e-12 76.6 196 34.2
FAN12G2246 Fragaria x ananassa HOM05D004548 ORTHO05D005402 3.2e-12 76.6 205 33.2
Glyma.09G186700 Glycine max HOM05D004548 ORTHO05D005402 4.2e-12 76.3 199 35.2
unitig_0.g417 Utricularia gibba HOM05D004548 ORTHO05D005402 5.5e-12 75.9 206 33.5
HPP92_007022 Vanilla planifolia HOM05D004548 ORTHO05D005402 5.5e-12 75.9 200 34.5
AT1G20050 Arabidopsis thaliana HOM05D004548 ORTHO05D005402 7.2e-12 75.5 210 31.9
CsaV3_4G002070 Cucumis sativus L. HOM05D004548 ORTHO05D005402 7.2e-12 75.5 198 32.8
HPP92_007039 Vanilla planifolia HOM05D004548 ORTHO05D005402 7.2e-12 75.5 200 34.5
VMungo0464G1792 Vigna mungo HOM05D004548 ORTHO05D005402 9.4e-12 75.1 197 33.0
MELO3C017829.2 Cucumis melo HOM05D004548 ORTHO05D005402 1.2e-11 74.7 198 33.8
FAN07G0049 Fragaria x ananassa HOM05D004548 ORTHO05D005402 1.2e-11 74.7 195 35.4
Sc17g0004750 Simmondsia chinensis HOM05D004548 ORTHO05D005402 1.2e-11 74.7 197 34.0
Aa31LG7G10030 Aethionema arabicum HOM05D004548 ORTHO05D005402 2.1e-11 73.9 201 34.3
Phvul.004G160000 Phaseolus vulgaris HOM05D004548 ORTHO05D005402 2.1e-11 73.9 201 33.3
Sed0003942 Sechium edule HOM05D004548 ORTHO05D005402 2.1e-11 73.9 196 32.1
Cfa009469 Carpinus fangiana HOM05D004548 ORTHO05D005402 1.0e-10 71.6 50 68.0
Medtr6g084920 Medicago truncatula HOM05D004548 ORTHO05D005402 1.0e-10 71.6 196 33.2
vmacro15975 Vaccinium macrocarpon HOM05D004548 ORTHO05D005402 1.8e-10 70.9 50 70.0
TPR.G38981 Trifolium pratense HOM05D004548 ORTHO05D005402 3.0e-10 70.1 196 33.2
Ah.14g079290 Amaranthus hybridus HOM05D004548 ORTHO05D005402 6.7e-10 68.9 171 33.3
MD16G1144400 Malus domestica HOM05D004548 ORTHO05D005402 1.5e-09 67.8 50 66.0
Lalb_Chr14g0371281 Lupinus albus HOM05D004548 ORTHO05D005402 9.7e-09 65.1 194 31.4
TPR.G21858 Trifolium pratense HOM05D004548 ORTHO05D005402 1.3e-08 64.7 50 64.0
Ah.09g224580 Amaranthus hybridus HOM05D004548 ORTHO05D005402 1.7e-08 64.3 171 33.3
FAN12G3080 Fragaria x ananassa HOM05D004548 ORTHO05D005402 1.7e-08 64.3 156 34.0
Ca_25508_v3 Cicer arietinum L. HOM05D004548 ORTHO05D005402 2.8e-08 63.5 50 62.0
EL10Ac8g18737 Beta vulgaris HOM05D004548 ORTHO05D005402 3.7e-08 63.2 198 31.8
A06p16180 Brassica napus HOM05D004548 ORTHO05D005402 6.3e-08 62.4 50 62.0
Hund23298 Selenicereus undatus HOM05D004548 ORTHO05D005402 6.3e-08 62.4 194 30.4
BcaC05g25903 Brassica carinata HOM05D004548 ORTHO05D005402 1.1e-07 61.6 47 63.8
BcaC05g25905 Brassica carinata HOM05D004548 ORTHO05D005402 1.1e-07 61.6 47 63.8
Glyma.13G078900 Glycine max HOM05D004548 ORTHO05D005402 2.4e-07 60.5 48 62.5
Os01g0103600 Oryza sativa ssp. japonica HOM05D004548 ORTHO05D005402 5.3e-07 59.3 196 30.1
Hund18283 Selenicereus undatus HOM05D004548 ORTHO05D005402 5.3e-07 59.3 193 29.0
Nn3g16208 Nelumbo nucifera HOM05D004548 ORTHO05D005402 9.1e-07 58.5 165 32.7
SGA_v2.0_scaffold95G28703 Striga asiatica HOM05D004548 ORTHO05D005402 9.1e-07 58.5 95 38.9
FAN17G2493 Fragaria x ananassa HOM05D004548 ORTHO05D005402 1.6e-06 57.8 270 27.0
arahy.Tifrunner.gnm1.ann1.L8Q3U6 Arachis hypogaea HOM05D004548 ORTHO05D005402 2.7e-06 57.0 48 60.4
Zm00001eb334120 Zea mays HOM05D004548 ORTHO05D005402 2.7e-06 57.0 196 29.1
CSS0047688 Camellia sinensis var. sinensis HOM05D004548 ORTHO05D005402 5.9e-06 55.8 191 29.8
Actinidia09588 Actinidia chinensis HOM05D004548 ORTHO05D005402 7.7e-06 55.5 50 56.0
arahy.Tifrunner.gnm1.ann1.Y6E3CC Arachis hypogaea HOM05D004548 ORTHO05D005402 7.7e-06 55.5 178 31.5
AUR62013297 Chenopodium quinoa HOM05D004548 ORTHO05D005402 7.7e-06 55.5 212 28.8


User provided reference genes

Program Settings