Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu018257.1 Olea europaea HOM05D006752 ORTHO05D008597 2.8e-277 958.0 482 100.0
CSS0021299 Camellia sinensis var. sinensis HOM05D006752 ORTHO05D008597 1.8e-95 354.0 347 57.1
SGA_v2.0_scaffold229G43313 Striga asiatica HOM05D006752 ORTHO05D008597 2.9e-93 346.7 369 53.4
CAN.G377.33 Capsicum annuum HOM05D006752 ORTHO05D008597 1.9e-92 344.0 354 55.4
PGSC0003DMG400020684 Solanum tuberosum HOM05D006752 ORTHO05D008597 1.9e-92 344.0 352 54.5
Dinv41564 Davidia involucrata HOM05D006752 ORTHO05D008088 1.2e-91 341.3 320 60.0
Nitab4.5_0005520g0050 Nicotiana tabacum HOM05D006752 ORTHO05D008597 1.6e-91 340.9 351 55.3
Solyc12g006710.3 Solanum lycopersicum HOM05D006752 ORTHO05D008597 2.1e-91 340.5 352 54.8
Sopen12g002660 Solanum pennellii HOM05D006752 ORTHO05D008597 2.1e-91 340.5 353 55.0
Nitab4.5_0001164g0060 Nicotiana tabacum HOM05D006752 ORTHO05D008597 8.0e-91 338.6 351 56.1
Migut.J01179 Erythranthe guttata HOM05D006752 ORTHO05D008597 4.4e-89 332.8 363 54.3
ECA234G0120 Erigeron canadensis HOM05D006752 ORTHO05D008597 3.7e-88 329.7 348 53.4
Atru.chr7.1279 Acer truncatum HOM05D006752 ORTHO05D008597 1.4e-87 327.8 355 54.4
Rhsim01G0090500 Rhododendron simsii HOM05D006752 ORTHO05D008597 1.1e-84 318.2 363 50.4
SalBow6G5676 Salvia bowleyana HOM05D006752 ORTHO05D008597 1.1e-84 318.2 360 51.9
Actinidia20330 Actinidia chinensis HOM05D006752 ORTHO05D008597 1.9e-84 317.4 349 51.3
GSVIVG01015454001 Vitis vinifera HOM05D006752 ORTHO05D008597 1.9e-84 317.4 339 52.2
MSTRG.19609 Avicennia marina HOM05D006752 ORTHO05D008597 6.8e-82 308.9 357 53.2
Cc06_g09220 Coffea canephora HOM05D006752 ORTHO05D008597 1.2e-81 308.1 344 52.6
HanXRQChr10g0317451 Helianthus annuus HOM05D006752 ORTHO05D008597 1.5e-81 307.8 345 50.4
Duzib168G0331 Durio zibethinus HOM05D006752 ORTHO05D008597 7.5e-81 305.4 348 50.9
Thecc.09G116900 Theobroma cacao HOM05D006752 ORTHO05D008597 4.9e-80 302.8 352 52.6
Gorai.010G068100 Gossypium raimondii HOM05D006752 ORTHO05D008597 1.1e-79 301.6 352 52.0
PGR142G0135 Punica granatum HOM05D006752 ORTHO05D008597 1.1e-79 301.6 361 49.6
Gohir.A06G059800 Gossypium hirsutum HOM05D006752 ORTHO05D008597 3.2e-79 300.1 352 52.3
vmacro20678 Vaccinium macrocarpon HOM05D006752 ORTHO05D008597 7.0e-79 298.9 337 51.3
Gohir.D06G058000 Gossypium hirsutum HOM05D006752 ORTHO05D008597 1.2e-78 298.1 348 50.9
TWI34G0637 Tripterygium wilfordii HOM05D006752 ORTHO05D008597 3.5e-78 296.6 317 52.1
DCAR_010437 Daucus carota HOM05D006752 ORTHO05D008597 2.9e-77 293.5 360 50.3
FAN26G3101 Fragaria x ananassa HOM05D006752 ORTHO05D008597 8.6e-77 292.0 366 47.0
FvH4_1g04220 Fragaria vesca HOM05D006752 ORTHO05D008597 1.1e-76 291.6 357 47.3
FAN28G1533 Fragaria x ananassa HOM05D006752 ORTHO05D008597 1.1e-76 291.6 363 47.1
Prupe.7G235200 Prunus persica HOM05D006752 ORTHO05D008597 1.1e-76 291.6 356 48.3
Sc08g0007050 Simmondsia chinensis HOM05D006752 ORTHO05D008597 1.1e-76 291.6 351 49.3
FAN19G2061 Fragaria x ananassa HOM05D006752 ORTHO05D008597 1.9e-76 290.8 356 47.5
COL.COLO4_34948 Corchorus olitorius HOM05D006393 ORTHO05D008088 9.5e-76 288.5 324 54.0
EL10Ac8g18558 Beta vulgaris HOM05D006752 ORTHO05D008597 1.6e-75 287.7 351 48.7
Peaxi162Scf00984g00260 Petunia axillaris HOM05D006752 ORTHO05D008597 1.0e-74 285.0 353 50.4
Nn8g39294 Nelumbo nucifera HOM05D006752 ORTHO05D008597 1.4e-74 284.6 345 49.3
TAR383G0518 Trochodendron aralioides HOM05D004738 ORTHO05D006439 2.6e-73 280.4 352 48.6
RcHm_v2.0_Chr2g0089761 Rosa chinensis HOM05D006752 ORTHO05D008597 5.8e-73 279.3 364 47.0
MD02G1061400 Malus domestica HOM05D006752 ORTHO05D008597 1.7e-72 277.7 354 46.6
Lalb_Chr11g0071961 Lupinus albus HOM05D006752 ORTHO05D008597 1.9e-71 274.2 352 48.0
CANSAT56G2958 Cannabis sativa HOM05D006752 ORTHO05D008597 4.1e-71 273.1 347 48.1
Manes.03G066500 Manihot esculenta HOM05D006752 ORTHO05D008597 7.0e-71 272.3 395 42.8
Lj7C639G3 Lonicera japonica HOM05D006752 ORTHO05D008597 1.2e-70 271.6 383 46.2
Sed0015690 Sechium edule HOM05D006752 ORTHO05D008597 3.0e-69 266.9 351 47.6
PSO782G3782 Papaver somniferum HOM05D006752 ORTHO05D008597 5.0e-69 266.2 351 47.0
Aqoxy7G01881 Aquilegia oxysepala HOM05D006752 ORTHO05D008597 6.6e-69 265.8 323 48.0
CiPaw.04G167500 Carya illinoinensis HOM05D006752 ORTHO05D008597 6.6e-69 265.8 408 42.4
Ah.14g081300 Amaranthus hybridus HOM05D006752 ORTHO05D008597 1.1e-68 265.0 343 46.6
Haze_25667 Corylus avellana HOM05D006752 ORTHO05D008597 1.6e-67 261.2 326 49.1
THA.LOC104815109 Tarenaya hassleriana HOM05D006752 ORTHO05D008597 2.1e-67 260.8 348 45.7
Potri.018G073100 Populus trichocarpa HOM05D006752 ORTHO05D008597 2.8e-67 260.4 412 42.7
Medtr2g050180 Medicago truncatula HOM05D006752 ORTHO05D008597 1.4e-66 258.1 366 44.3
Hund09171 Selenicereus undatus HOM05D006752 ORTHO05D008597 2.3e-66 257.3 316 46.8
ClCG06G010500 Citrullus lanatus HOM05D006752 ORTHO05D008597 4.0e-66 256.5 341 46.0
Lj1g0009545 Lotus japonicus HOM05D006752 ORTHO05D008597 6.8e-66 255.8 404 42.1
arahy.Tifrunner.gnm1.ann1.CJP391 Arachis hypogaea HOM05D006752 ORTHO05D008597 8.9e-66 255.4 360 45.3
Glyma.06G211500 Glycine max HOM05D006752 ORTHO05D008597 1.2e-65 255.0 355 45.4
MBI01_g13570_MAGBIO Magnolia biondii HOM05D006752 ORTHO05D008597 3.4e-65 253.4 415 40.2
Eucgr.C01084 Eucalyptus grandis HOM05D006752 ORTHO05D008597 5.8e-65 252.7 339 46.0
arahy.Tifrunner.gnm1.ann1.TG1F9L Arachis hypogaea HOM05D006752 ORTHO05D008597 1.7e-64 251.1 376 43.6
Lsat_1_v5_gn_5_99240 Lactuca sativa HOM05D006752 ORTHO05D008597 1.7e-64 251.1 347 45.2
Cpa.g.sc23.163 Carica papaya HOM05D006752 ORTHO05D008597 2.9e-64 250.4 380 42.1
VMungo1309G1199 Vigna mungo HOM05D006752 ORTHO05D008597 8.3e-64 248.8 372 44.1
Thhalv10013545m.g Eutrema salsugineum HOM05D006752 ORTHO05D008597 1.9e-63 247.7 360 45.0
Sabra18G0063600 Salix brachista HOM05D006752 ORTHO05D008597 1.9e-63 247.7 408 41.7
MELO3C025306.2 Cucumis melo HOM05D006752 ORTHO05D008597 3.2e-63 246.9 404 39.1
TPR.G10362 Trifolium pratense HOM05D006752 ORTHO05D008597 4.1e-63 246.5 363 43.5
Psat1g025400 Pisum sativum HOM05D006752 ORTHO05D008597 7.1e-63 245.7 360 42.5
Carub.0006s1832 Capsella rubella HOM05D006752 ORTHO05D008597 1.2e-62 245.0 365 45.2
Phvul.009G200000 Phaseolus vulgaris HOM05D006752 ORTHO05D008597 1.2e-62 245.0 368 43.2
A10p19780 Brassica napus HOM05D006752 ORTHO05D008597 2.7e-62 243.8 364 44.2
BraA10t44054Z Brassica rapa HOM05D006752 ORTHO05D008597 2.7e-62 243.8 364 44.2
BcaC04g19401 Brassica carinata HOM05D006752 ORTHO05D008597 4.6e-62 243.0 356 44.9
C09p56100 Brassica napus HOM05D006752 ORTHO05D008597 4.6e-62 243.0 356 44.9
Sp6g24430 Schrenkiella parvula HOM05D006752 ORTHO05D008597 6.0e-62 242.7 359 43.7
QL02p086379 Quercus lobata HOM05D006752 ORTHO05D008597 1.7e-61 241.1 487 36.1
BolC9t58477H Brassica oleracea HOM05D006752 ORTHO05D008597 2.3e-61 240.7 356 44.7
AL6G31480 Arabidopsis lyrata HOM05D006752 ORTHO05D008597 3.9e-61 240.0 362 44.2
ATR0815G047 Amborella trichopoda HOM05D006752 ORTHO05D008597 1.9e-60 237.7 360 41.7
CARHR192900 Cardamine hirsuta HOM05D006752 ORTHO05D008597 1.9e-60 237.7 353 45.0
AT5G19950 Arabidopsis thaliana HOM05D006752 ORTHO05D008597 3.3e-60 236.9 360 43.9
AUR62011040 Chenopodium quinoa HOM05D006393 ORTHO05D008088 7.3e-60 235.7 315 46.3
Os01g0178100 Oryza sativa ssp. japonica HOM05D006752 ORTHO05D008597 7.3e-60 235.7 342 45.0
AUR62033416 Chenopodium quinoa HOM05D006752 ORTHO05D008597 6.2e-59 232.6 316 46.5
Aa31LG8G9350 Aethionema arabicum HOM05D006752 ORTHO05D008597 3.7e-56 223.4 361 41.6
HPP92_008698 Vanilla planifolia HOM05D006752 ORTHO05D008597 2.1e-54 217.6 349 41.8
BcaB08g36551 Brassica carinata HOM05D006752 ORTHO05D008597 3.5e-54 216.9 355 42.5
CDE02G1475 Ceratophyllum demersum HOM05D006752 ORTHO05D008597 1.3e-53 214.9 299 44.8
Actinidia09396 Actinidia chinensis HOM05D006393 ORTHO05D008088 5.6e-52 209.5 325 44.6
Ca_05468_v3 Cicer arietinum L. HOM05D006752 ORTHO05D008597 9.6e-44 182.2 154 60.4
Hma1.2p1_0018F.1_g013060 Hydrangea macrophylla HOM05D006752 ORTHO05D008597 2.1e-43 181.0 136 65.4
SEGI_05783 Sequoiadendron giganteum HOM05D006752 ORTHO05D008597 9.0e-42 175.6 452 33.0
CsaV3_1G030960 Cucumis sativus L. HOM05D006752 ORTHO05D008597 1.3e-40 171.8 257 41.6
Sc08g0007030 Simmondsia chinensis HOM05D006752 ORTHO05D008597 6.2e-35 152.9 141 51.8
CSS0016306 Camellia sinensis var. sinensis HOM05D006752 ORTHO05D008597 2.1e-30 137.9 117 62.4
Pp3c9_1660 Physcomitrium patens HOM05D006752 ORTHO05D008597 3.9e-29 133.7 410 31.0
Pp3c9_1669 Physcomitrium patens HOM05D006752 ORTHO05D008597 3.9e-29 133.7 410 31.0
Cc08_g07650 Coffea canephora HOM05D006752 ORTHO05D008597 4.3e-28 130.2 122 55.7
Mapoly0040s0028 Marchantia polymorpha HOM05D006752 ORTHO05D008597 4.5e-25 120.2 501 26.7
MD00G1026200 Malus domestica HOM05D006752 ORTHO05D008597 5.5e-23 113.2 175 36.0
Zm00001eb336920 Zea mays HOM05D006752 ORTHO05D008597 2.1e-22 111.3 230 40.0
Sc08g0007040 Simmondsia chinensis HOM05D006752 ORTHO05D008597 3.5e-22 110.5 138 50.0
Ca_30697_v3 Cicer arietinum L. HOM05D006752 ORTHO05D008597 1.3e-21 108.6 123 49.6
MD02G1041600 Malus domestica HOM05D006752 ORTHO05D008597 2.4e-18 97.8 85 51.8
MD00G1027300 Malus domestica HOM05D006752 ORTHO05D008597 4.2e-15 87.0 68 54.4
CBR_g41660 Chara braunii HOM05D001740 ORTHO05D001468 7.2e-15 86.3 152 34.2
CSS0032277 Camellia sinensis var. sinensis HOM05D006752 ORTHO05D008597 6.1e-14 83.2 170 35.3
Cre16.g653000 Chlamydomonas reinhardtii HOM05D006752 ORTHO05D008597 1.3e-13 82.0 338 27.5
MD02G1038900 Malus domestica HOM05D006752 ORTHO05D008597 3.7e-11 73.9 69 49.3
MD02G1041500 Malus domestica HOM05D006752 ORTHO05D008597 4.8e-11 73.6 75 49.3
MCO09G826 Micromonas commoda HOM05D006752 ORTHO05D008597 2.2e-08 64.7 246 28.9
TWI32G0100 Tripterygium wilfordii HOM05D006752 ORTHO05D008597 2.5e-07 61.2 138 33.3


User provided reference genes

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