Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu018173.1 Olea europaea HOM05D006249 ORTHO05D007643 2.2e-171 605.5 298 100.0
Migut.D00374 Erythranthe guttata HOM05D006249 ORTHO05D007643 1.6e-129 466.5 313 73.8
CSS0046504 Camellia sinensis var. sinensis HOM05D006249 ORTHO05D007643 1.1e-117 427.2 316 69.6
MSTRG.21512 Avicennia marina HOM05D006249 ORTHO05D007643 8.9e-117 424.1 309 70.2
Sopen09g027650 Solanum pennellii HOM05D006249 ORTHO05D007643 9.3e-114 414.1 315 68.6
SalBow4G2323 Salvia bowleyana HOM05D006249 ORTHO05D007643 1.0e-112 410.6 314 67.8
COL.COLO4_06075 Corchorus olitorius HOM05D006249 ORTHO05D007643 2.3e-112 409.5 312 65.7
Solyc09g065860.3 Solanum lycopersicum HOM05D006249 ORTHO05D007643 8.7e-112 407.5 315 67.9
Cpa.g.sc52.92 Carica papaya HOM05D006249 ORTHO05D007643 1.1e-111 407.1 315 67.9
SGA_v2.0_scaffold1G00558 Striga asiatica HOM05D004045 ORTHO05D004923 2.5e-111 406.0 259 74.5
Rhsim01G0269700 Rhododendron simsii HOM05D006249 ORTHO05D007643 7.3e-111 404.4 319 65.2
GSVIVG01000723001 Vitis vinifera HOM05D006249 ORTHO05D007643 3.6e-110 402.1 312 65.1
Thecc.01G267400 Theobroma cacao HOM05D006249 ORTHO05D007643 4.8e-110 401.7 313 64.9
Peaxi162Scf00049g00209 Petunia axillaris HOM05D006249 ORTHO05D007643 1.1e-109 400.6 296 69.3
Cc01_g18850 Coffea canephora HOM05D006249 ORTHO05D007643 3.1e-109 399.1 300 66.7
CAN.G1259.4 Capsicum annuum HOM05D006249 ORTHO05D007643 9.0e-109 397.5 315 67.6
CSS0032391 Camellia sinensis var. sinensis HOM05D006249 ORTHO05D007643 9.9e-108 394.0 298 68.1
Manes.05G084500 Manihot esculenta HOM05D006249 ORTHO05D007643 3.8e-107 392.1 306 66.0
Lj2C1159G1 Lonicera japonica HOM05D006249 ORTHO05D007643 6.4e-107 391.3 311 65.3
Potri.005G218700 Populus trichocarpa HOM05D006249 ORTHO05D007643 1.9e-106 389.8 313 64.2
Nitab4.5_0001556g0120 Nicotiana tabacum HOM05D006249 ORTHO05D007643 2.4e-106 389.4 292 68.2
RcHm_v2.0_Chr6g0289561 Rosa chinensis HOM05D006249 ORTHO05D007643 3.2e-106 389.0 312 64.4
Dinv34569 Davidia involucrata HOM05D006249 ORTHO05D007643 4.2e-106 388.7 312 66.0
vmacro14872 Vaccinium macrocarpon HOM05D006249 ORTHO05D007643 4.2e-106 388.7 269 69.9
FvH4_2g22511 Fragaria vesca HOM05D006249 ORTHO05D007643 5.4e-106 388.3 312 64.7
Ciclev10021257m.g Citrus clementina HOM05D006249 ORTHO05D007643 1.2e-105 387.1 313 62.9
CiPaw.03G257400 Carya illinoinensis HOM05D006249 ORTHO05D007643 2.1e-105 386.3 300 65.3
CANSAT01G0091 Cannabis sativa HOM05D006249 ORTHO05D007643 1.3e-104 383.6 302 64.9
Duzib138G0419 Durio zibethinus HOM05D006249 ORTHO05D007643 3.0e-104 382.5 313 62.6
PGSC0003DMG400019301 Solanum tuberosum HOM05D006249 ORTHO05D007643 1.5e-103 380.2 236 77.5
Prupe.8G232100 Prunus persica HOM05D006249 ORTHO05D007643 2.5e-103 379.4 313 61.0
AT1G03030 Arabidopsis thaliana HOM05D006249 ORTHO05D007643 9.6e-103 377.5 306 63.4
CARHR002370 Cardamine hirsuta HOM05D006249 ORTHO05D007643 1.6e-102 376.7 309 62.5
Gohir.D11G132800 Gossypium hirsutum HOM05D006249 ORTHO05D007643 1.6e-102 376.7 312 61.2
ECA248G0032 Erigeron canadensis HOM05D006249 ORTHO05D007643 2.8e-102 375.9 252 71.4
PGR044G2488 Punica granatum HOM05D006249 ORTHO05D007643 2.8e-102 375.9 309 62.5
QL12p042687 Quercus lobata HOM05D006249 ORTHO05D007643 3.6e-102 375.6 294 66.3
Haze_24532 Corylus avellana HOM05D006249 ORTHO05D007643 6.2e-102 374.8 294 64.3
Gorai.007G142000 Gossypium raimondii HOM05D006249 ORTHO05D007643 6.2e-102 374.8 312 60.9
BcaC07g42289 Brassica carinata HOM05D006249 ORTHO05D007643 1.1e-101 374.0 307 61.6
C05p01650 Brassica napus HOM05D006249 ORTHO05D007643 1.1e-101 374.0 323 60.1
BolC5t28944H Brassica oleracea HOM05D006249 ORTHO05D007643 1.1e-101 374.0 307 61.6
Gohir.A11G127400 Gossypium hirsutum HOM05D006249 ORTHO05D007643 1.4e-101 373.6 314 61.1
Sc17g0000990 Simmondsia chinensis HOM05D006249 ORTHO05D007643 2.4e-101 372.9 248 71.0
Carub.0001s0216 Capsella rubella HOM05D006249 ORTHO05D007643 3.1e-101 372.5 307 62.5
A10p01650 Brassica napus HOM05D006249 ORTHO05D007643 2.0e-100 369.8 306 61.8
BraA10t42442Z Brassica rapa HOM05D006249 ORTHO05D007643 2.0e-100 369.8 306 61.4
Eucgr.K03312 Eucalyptus grandis HOM05D006249 ORTHO05D007643 2.6e-100 369.4 260 69.2
CsaV3_5G002000 Cucumis sativus L. HOM05D006249 ORTHO05D007643 4.5e-100 368.6 257 68.1
Lsat_1_v5_gn_5_186740 Lactuca sativa HOM05D006249 ORTHO05D007643 1.3e-99 367.1 310 61.6
ClCG01G001850 Citrullus lanatus HOM05D006249 ORTHO05D007643 1.7e-99 366.7 254 68.1
HanXRQChr01g0006841 Helianthus annuus HOM05D006249 ORTHO05D007643 2.9e-99 365.9 312 60.3
Lj1g0022179 Lotus japonicus HOM05D006249 ORTHO05D007643 2.9e-99 365.9 310 60.0
Atru.chr5.1566 Acer truncatum HOM05D006249 ORTHO05D007643 3.8e-99 365.5 230 75.2
Atru.chr5.1568 Acer truncatum HOM05D006249 ORTHO05D007643 3.8e-99 365.5 230 75.2
TAR362G0606 Trochodendron aralioides HOM05D006249 ORTHO05D007643 1.1e-98 364.0 313 61.7
MELO3C005753.2 Cucumis melo HOM05D006249 ORTHO05D007643 2.4e-98 362.8 257 67.3
Thhalv10008317m.g Eutrema salsugineum HOM05D006249 ORTHO05D007643 2.4e-98 362.8 305 60.0
THA.LOC104801257 Tarenaya hassleriana HOM05D006249 ORTHO05D007643 5.5e-98 361.7 250 68.0
Aa31LG1G9510 Aethionema arabicum HOM05D006249 ORTHO05D007643 2.1e-97 359.8 306 58.8
AUR62011941 Chenopodium quinoa HOM05D006249 ORTHO05D007643 2.7e-97 359.4 314 59.6
AL1G12480 Arabidopsis lyrata HOM05D006249 ORTHO05D007643 4.6e-97 358.6 230 75.7
Hund09572 Selenicereus undatus HOM05D006249 ORTHO05D007643 4.6e-97 358.6 300 60.0
Nitab4.5_0000187g0200 Nicotiana tabacum HOM05D006249 ORTHO05D007643 1.0e-96 357.5 230 76.1
MD05G1205700 Malus domestica HOM05D006249 ORTHO05D007643 1.8e-96 356.7 312 58.7
Glyma.19G161200 Glycine max HOM05D006249 ORTHO05D007643 9.6e-95 350.9 267 62.9
Nn1g02571 Nelumbo nucifera HOM05D006249 ORTHO05D007643 1.3e-94 350.5 310 58.7
Medtr7g096100 Medicago truncatula HOM05D006249 ORTHO05D007643 2.8e-94 349.4 257 63.8
Aqoxy2G03531 Aquilegia oxysepala HOM05D006249 ORTHO05D007643 1.8e-93 346.7 299 59.2
FAN15G1994 Fragaria x ananassa HOM05D004045 ORTHO05D004923 5.3e-93 345.1 253 67.2
FAN15G3229 Fragaria x ananassa HOM05D004045 ORTHO05D004923 5.3e-93 345.1 253 67.2
TPR.G5717 Trifolium pratense HOM05D006249 ORTHO05D007643 1.2e-92 344.0 248 64.5
Psat3g061040 Pisum sativum HOM05D006249 ORTHO05D007643 2.6e-92 342.8 260 60.4
MBI04_g06851_MAGBIO Magnolia biondii HOM05D006249 ORTHO05D007643 2.9e-91 339.3 304 55.9
VMungo1383G3440 Vigna mungo HOM05D004045 ORTHO05D004923 7.1e-90 334.7 287 57.8
TWI18G0435 Tripterygium wilfordii HOM05D006249 ORTHO05D007643 1.0e-88 330.9 286 61.2
Lalb_Chr25g0290111 Lupinus albus HOM05D006249 ORTHO05D007643 8.7e-88 327.8 261 60.9
Oeu018171.1 Olea europaea HOM05D006249 ORTHO05D007643 8.7e-88 327.8 164 98.8
arahy.Tifrunner.gnm1.ann1.EN4NAA Arachis hypogaea HOM05D006249 ORTHO05D007643 1.6e-86 323.6 302 55.3
arahy.Tifrunner.gnm1.ann1.3ZGG11 Arachis hypogaea HOM05D006249 ORTHO05D007643 3.7e-86 322.4 303 55.4
CDE06G0138 Ceratophyllum demersum HOM05D006249 ORTHO05D007643 4.8e-86 322.0 254 61.8
Sabra05G0167700 Salix brachista HOM05D005019 ORTHO05D006625 5.3e-85 318.5 312 56.4
ATR0665G572 Amborella trichopoda HOM05D006249 ORTHO05D007643 6.9e-85 318.2 257 59.1
Os12g0601200 Oryza sativa ssp. japonica HOM05D006249 ORTHO05D007643 5.9e-84 315.1 241 63.1
HPP92_012490 Vanilla planifolia HOM05D006249 ORTHO05D007643 2.2e-83 313.2 277 57.0
PSO832G1981 Papaver somniferum HOM05D006249 ORTHO05D007643 2.9e-83 312.8 315 54.9
Zm00001eb135540 Zea mays HOM05D006249 ORTHO05D007643 1.4e-82 310.5 245 61.6
BcaC07g42286 Brassica carinata HOM05D006249 ORTHO05D007643 1.6e-81 307.0 249 61.4
PSO210G4763 Papaver somniferum HOM05D006249 ORTHO05D007643 2.7e-81 306.2 318 53.5
Sed0010412 Sechium edule HOM05D006249 ORTHO05D007643 2.3e-80 303.1 238 62.6
Ah.02g111470 Amaranthus hybridus HOM05D006249 ORTHO05D007643 2.2e-78 296.6 245 59.2
AUR62032256 Chenopodium quinoa HOM05D006249 ORTHO05D007643 4.8e-78 295.4 303 53.8
BcaC07g42292 Brassica carinata HOM05D006249 ORTHO05D007643 1.5e-71 273.9 337 49.9
Mapoly0096s0074 Marchantia polymorpha HOM05D006249 ORTHO05D007643 3.3e-71 272.7 248 54.8
unitig_0.g1129 Utricularia gibba HOM05D006249 ORTHO05D007643 4.3e-71 272.3 181 70.7
Pp3c17_16800 Physcomitrium patens HOM05D006249 ORTHO05D007643 5.0e-67 258.8 260 51.2
Actinidia21156 Actinidia chinensis HOM05D006249 ORTHO05D007643 3.9e-64 249.2 253 53.4
Medtr4g076080 Medicago truncatula HOM05D006249 ORTHO05D007643 6.7e-64 248.4 242 51.7
Phvul.001G156700 Phaseolus vulgaris HOM05D006249 ORTHO05D007643 1.7e-62 243.8 195 60.5
AagrBONN_evm.TU.Sc2ySwM_228.3891 Anthoceros agrestis HOM05D006249 ORTHO05D007643 2.5e-58 229.9 216 53.7
EL10Ac5g10475 Beta vulgaris HOM05D006249 ORTHO05D007643 5.5e-58 228.8 153 71.9
SEGI_12640 Sequoiadendron giganteum HOM05D006249 ORTHO05D007643 4.1e-53 212.6 168 58.3
RcHm_v2.0_Chr4g0397901 Rosa chinensis HOM05D006249 ORTHO05D007643 1.2e-52 211.1 177 62.1
SMO358G0282 Selaginella moellendorffii HOM05D000331 ORTHO05D002018 6.8e-48 195.3 197 51.3
Cre02.g101000 Chlamydomonas reinhardtii HOM05D006249 ORTHO05D007643 2.7e-44 183.3 269 38.3
MCO14G208 Micromonas commoda HOM05D006249 ORTHO05D007643 3.2e-42 176.4 245 39.6
Sp1g02020 Schrenkiella parvula HOM05D006249 ORTHO05D007643 4.2e-42 176.0 187 50.8
Ca_15970_v3 Cicer arietinum L. HOM05D006249 ORTHO05D007643 7.3e-34 148.7 123 52.8
Hund30725 Selenicereus undatus HOM05D006249 ORTHO05D007643 3.0e-32 143.3 99 66.7
arahy.Tifrunner.gnm1.ann1.U7WVQR Arachis hypogaea HOM05D006249 ORTHO05D007643 4.4e-31 139.4 253 37.9
CBR_g19145 Chara braunii HOM05D006249 ORTHO05D007643 7.5e-31 138.7 164 47.0
Medtr8g064430 Medicago truncatula HOM05D006249 ORTHO05D007643 1.8e-29 134.0 91 67.0
Hund30696 Selenicereus undatus HOM05D006249 ORTHO05D007643 2.4e-29 133.7 98 63.3
Glyma.03G158766 Glycine max HOM05D006249 ORTHO05D007643 4.6e-28 129.4 93 66.7
Glyma.03G158832 Glycine max HOM05D006249 ORTHO05D007643 2.9e-22 110.2 65 76.9
CSS0005124 Camellia sinensis var. sinensis HOM05D006249 ORTHO05D007643 2.0e-20 104.0 58 82.8
PRCOL_00003971 Prasinoderma coloniale HOM05D006249 ORTHO05D007643 2.7e-20 103.6 178 37.1
Cfa022768 Carpinus fangiana HOM05D006249 ORTHO05D007643 3.5e-20 103.2 150 38.0
arahy.Tifrunner.gnm1.ann1.FBQK8B Arachis hypogaea HOM05D006249 ORTHO05D007643 2.5e-18 97.1 107 48.6
arahy.Tifrunner.gnm1.ann1.AHQ53Z Arachis hypogaea HOM05D006249 ORTHO05D007643 4.3e-18 96.3 109 48.6
SHI29847 Sapria himalayana HOM05D006249 ORTHO05D007643 6.2e-17 92.4 125 40.0
SHI29011 Sapria himalayana HOM05D006249 ORTHO05D007643 1.4e-13 81.3 191 31.9
SHI34902 Sapria himalayana HOM05D006249 ORTHO05D007643 1.4e-13 81.3 137 39.4
SHI16544 Sapria himalayana HOM05D006249 ORTHO05D007643 3.5e-12 76.6 116 39.7
SHI36883 Sapria himalayana HOM05D006249 ORTHO05D007643 3.9e-11 73.2 56 55.4
SEGI_29111 Sequoiadendron giganteum HOM05D006249 ORTHO05D007643 2.3e-08 63.9 41 68.3
SHI54291 Sapria himalayana HOM05D006249 ORTHO05D007643 2.6e-07 60.5 148 33.8
SHI31647 Sapria himalayana HOM05D006249 ORTHO05D007643 3.4e-07 60.1 61 47.5
SHI49503 Sapria himalayana HOM05D000624 ORTHO05D000495 3.8e-06 56.6 50 60.0
SHI34501 Sapria himalayana HOM05D006249 ORTHO05D007643 6.4e-06 55.8 97 38.1


User provided reference genes

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