Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu018066.1 Olea europaea HOM05D003881 ORTHO05D004343 0.0e+00 1963.7 1060 100.0
CAN.G457.4 Capsicum annuum HOM05D003881 ORTHO05D004343 0.0e+00 1529.6 1010 78.6
MSTRG.26461 Avicennia marina HOM05D003881 ORTHO05D004343 0.0e+00 1528.8 1055 78.1
Nn8g38678 Nelumbo nucifera HOM05D003881 ORTHO05D004343 0.0e+00 1456.8 1051 74.2
CSS0040077 Camellia sinensis var. sinensis HOM05D003881 ORTHO05D004343 0.0e+00 1451.4 1010 74.7
Dinv42377 Davidia involucrata HOM05D003881 ORTHO05D004343 0.0e+00 1445.3 1053 74.7
Lj7A685T51 Lonicera japonica HOM05D003881 ORTHO05D004343 0.0e+00 1444.9 1015 74.0
TAR383G1047 Trochodendron aralioides HOM05D003881 ORTHO05D004343 0.0e+00 1440.2 1053 73.7
Migut.L01552 Erythranthe guttata HOM05D003881 ORTHO05D004343 0.0e+00 1438.3 1050 74.5
GSVIVG01015096001 Vitis vinifera HOM05D003881 ORTHO05D004343 0.0e+00 1425.2 1051 75.3
SGA_v2.0_scaffold21G09481 Striga asiatica HOM05D003881 ORTHO05D004343 0.0e+00 1422.9 1024 73.6
Oeu041279.1 Olea europaea HOM05D003881 ORTHO05D004343 0.0e+00 1416.0 998 72.9
Lsat_1_v5_gn_5_141221 Lactuca sativa HOM05D003881 ORTHO05D004343 0.0e+00 1414.4 1032 71.8
ECA232G2980 Erigeron canadensis HOM05D003881 ORTHO05D004343 0.0e+00 1411.4 1011 72.4
Rhsim03G0228800 Rhododendron simsii HOM05D003881 ORTHO05D004343 0.0e+00 1411.4 1007 72.8
HanXRQChr12g0354081 Helianthus annuus HOM05D003881 ORTHO05D004343 0.0e+00 1407.5 1009 72.6
Rhsim01G0044500 Rhododendron simsii HOM05D003881 ORTHO05D004343 0.0e+00 1400.2 1027 71.4
CANSAT56G1084 Cannabis sativa HOM05D003881 ORTHO05D004343 0.0e+00 1396.3 1012 71.3
MBI19_g11836_MAGBIO Magnolia biondii HOM05D003881 ORTHO05D004343 0.0e+00 1389.4 1006 71.3
Prupe.7G201100 Prunus persica HOM05D003881 ORTHO05D004343 0.0e+00 1386.7 1010 71.0
TWI34G0082 Tripterygium wilfordii HOM05D003881 ORTHO05D004343 0.0e+00 1385.5 1053 70.2
Ca_26333_v3 Cicer arietinum L. HOM05D003881 ORTHO05D004343 0.0e+00 1384.4 997 72.7
CsaV3_1G040850 Cucumis sativus L. HOM05D003881 ORTHO05D004343 0.0e+00 1382.5 1052 70.2
Dinv25567 Davidia involucrata HOM05D003881 ORTHO05D004343 0.0e+00 1382.5 1052 71.8
Actinidia29923 Actinidia chinensis HOM05D003881 ORTHO05D004343 0.0e+00 1377.5 1011 71.9
Potri.006G143300 Populus trichocarpa HOM05D003881 ORTHO05D004343 0.0e+00 1376.7 1010 71.0
Aqoxy5G02361 Aquilegia oxysepala HOM05D003881 ORTHO05D004343 0.0e+00 1374.0 1010 70.9
MELO3C015512.2 Cucumis melo HOM05D003881 ORTHO05D004343 0.0e+00 1369.4 1000 70.4
arahy.Tifrunner.gnm1.ann1.13CNWC Arachis hypogaea HOM05D003881 ORTHO05D004343 0.0e+00 1365.1 1047 70.7
ClCG03G015190 Citrullus lanatus HOM05D003881 ORTHO05D004343 0.0e+00 1363.6 1025 69.0
Manes.16G096500 Manihot esculenta HOM05D003881 ORTHO05D004343 0.0e+00 1363.2 1054 70.4
Nitab4.5_0000343g0070 Nicotiana tabacum HOM05D003881 ORTHO05D004343 0.0e+00 1359.7 998 71.8
Sabra06G0112200 Salix brachista HOM05D003881 ORTHO05D004343 0.0e+00 1358.6 1010 70.3
Sabra06G0113500 Salix brachista HOM05D003881 ORTHO05D004343 0.0e+00 1358.6 1010 70.3
Cc06_g12030 Coffea canephora HOM05D003881 ORTHO05D004343 0.0e+00 1358.2 1020 73.5
FAN19G1850 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1357.4 1001 70.0
FAN26G0375 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1356.7 1001 69.9
Psat1g133400 Pisum sativum HOM05D003881 ORTHO05D004343 0.0e+00 1356.7 1007 70.9
arahy.Tifrunner.gnm1.ann1.3W29E4 Arachis hypogaea HOM05D003881 ORTHO05D004343 0.0e+00 1353.2 1081 68.8
Cfa003017 Carpinus fangiana HOM05D003881 ORTHO05D004343 0.0e+00 1352.8 1010 72.9
CiPaw.03G207700 Carya illinoinensis HOM05D003881 ORTHO05D004343 0.0e+00 1352.8 1053 70.4
RcHm_v2.0_Chr2g0094531 Rosa chinensis HOM05D003881 ORTHO05D004343 0.0e+00 1352.8 1004 72.3
Sed0009854 Sechium edule HOM05D003881 ORTHO05D004343 0.0e+00 1349.0 1010 69.5
Ciclev10007295m.g Citrus clementina HOM05D003881 ORTHO05D004343 0.0e+00 1348.6 936 73.4
Phvul.009G228100 Phaseolus vulgaris HOM05D003881 ORTHO05D004343 0.0e+00 1348.2 1050 69.9
Lalb_Chr11g0074291 Lupinus albus HOM05D003881 ORTHO05D004343 0.0e+00 1347.8 970 72.1
DCAR_031930 Daucus carota HOM05D003881 ORTHO05D004343 0.0e+00 1347.4 1011 70.5
Haze_25994 Corylus avellana HOM05D003881 ORTHO05D004343 0.0e+00 1347.0 1035 71.3
Lj6g0005202 Lotus japonicus HOM05D003881 ORTHO05D004343 0.0e+00 1345.1 980 71.8
Glyma.15G176400 Glycine max HOM05D003881 ORTHO05D004343 0.0e+00 1344.3 997 70.6
Glyma.09G068600 Glycine max HOM05D003881 ORTHO05D004343 0.0e+00 1343.2 957 72.5
Medtr2g041420 Medicago truncatula HOM05D003881 ORTHO05D004343 0.0e+00 1340.9 997 70.4
Rhsim01G0044300 Rhododendron simsii HOM05D003881 ORTHO05D004343 0.0e+00 1339.3 1007 70.3
MD02G1088500 Malus domestica HOM05D003881 ORTHO05D004343 0.0e+00 1337.8 1010 71.6
FAN26G1433 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1337.0 1041 67.2
FvH4_1g08430 Fragaria vesca HOM05D003881 ORTHO05D004343 0.0e+00 1335.1 1004 69.1
Eucgr.C00824 Eucalyptus grandis HOM05D003881 ORTHO05D004343 0.0e+00 1334.7 1053 68.0
SalBow4G1287 Salvia bowleyana HOM05D003881 ORTHO05D004343 0.0e+00 1334.7 1024 69.9
ATR0598G033 Amborella trichopoda HOM05D003881 ORTHO05D004343 0.0e+00 1333.5 1012 71.5
Nitab4.5_0001488g0030 Nicotiana tabacum HOM05D003881 ORTHO05D004343 0.0e+00 1332.8 1000 73.5
Thecc.09G079000 Theobroma cacao HOM05D003881 ORTHO05D004343 0.0e+00 1332.4 935 73.5
FAN28G2111 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1330.5 1004 68.8
Atru.chr7.1693 Acer truncatum HOM05D003881 ORTHO05D004343 0.0e+00 1326.2 1060 69.0
COL.COLO4_18111 Corchorus olitorius HOM05D003881 ORTHO05D004343 0.0e+00 1323.1 1010 69.4
Gorai.001G015300 Gossypium raimondii HOM05D003881 ORTHO05D004343 0.0e+00 1322.0 936 72.3
Gohir.A07G014800 Gossypium hirsutum HOM05D003881 ORTHO05D004343 0.0e+00 1320.8 936 72.2
Gohir.D07G014500 Gossypium hirsutum HOM05D003881 ORTHO05D004343 0.0e+00 1320.4 936 72.2
THA.LOC104815327 Tarenaya hassleriana HOM05D003881 ORTHO05D004343 0.0e+00 1317.8 1002 68.4
QL11p000475 Quercus lobata HOM05D003881 ORTHO05D004343 0.0e+00 1315.8 1112 66.3
CDE06G1176 Ceratophyllum demersum HOM05D003881 ORTHO05D004343 0.0e+00 1311.6 959 70.0
Sc14g0000600 Simmondsia chinensis HOM05D003881 ORTHO05D004343 0.0e+00 1305.0 1007 67.8
Haze_25986 Corylus avellana HOM05D003881 ORTHO05D004343 0.0e+00 1303.1 1035 69.8
Sp3g24670 Schrenkiella parvula HOM05D003881 ORTHO05D004343 0.0e+00 1302.7 1012 66.7
PSO724G0120 Papaver somniferum HOM05D003881 ORTHO05D004343 0.0e+00 1299.3 1051 67.8
PSO135G0960 Papaver somniferum HOM05D003881 ORTHO05D004343 0.0e+00 1298.9 1065 67.1
TPR.G28668 Trifolium pratense HOM05D003881 ORTHO05D004343 0.0e+00 1295.0 964 69.9
BcaB08g34515 Brassica carinata HOM05D003881 ORTHO05D004343 0.0e+00 1294.3 1009 66.3
Thhalv10002377m.g Eutrema salsugineum HOM05D003881 ORTHO05D004343 0.0e+00 1293.9 1012 66.7
Carub.0003s2725 Capsella rubella HOM05D003881 ORTHO05D004343 0.0e+00 1293.5 1012 66.6
AL3G43760 Arabidopsis lyrata HOM05D003881 ORTHO05D004343 0.0e+00 1293.1 1012 67.1
Hund26018 Selenicereus undatus HOM05D003881 ORTHO05D004343 0.0e+00 1288.5 1011 67.1
PGR142G3183 Punica granatum HOM05D003881 ORTHO05D004343 0.0e+00 1279.2 1009 66.6
C03p55630 Brassica napus HOM05D003881 ORTHO05D004343 0.0e+00 1276.5 1012 65.5
BolC3t17840H Brassica oleracea HOM05D003881 ORTHO05D004343 0.0e+00 1276.5 1012 65.5
Aa31sc133G100 Aethionema arabicum HOM05D003881 ORTHO05D004343 0.0e+00 1275.8 1045 64.9
A03p44780 Brassica napus HOM05D003881 ORTHO05D004343 0.0e+00 1275.4 1012 65.4
BraA03t13613Z Brassica rapa HOM05D003881 ORTHO05D004343 0.0e+00 1275.4 1012 65.4
DCAR_024741 Daucus carota HOM05D003881 ORTHO05D004343 0.0e+00 1270.4 1157 61.1
Duzib168G2095 Durio zibethinus HOM05D003881 ORTHO05D004343 0.0e+00 1257.7 936 69.9
BcaC01g03143 Brassica carinata HOM05D003881 ORTHO05D004343 0.0e+00 1251.9 993 65.6
SEGI_24391 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 0.0e+00 1246.5 1005 64.7
vmacro06329 Vaccinium macrocarpon HOM05D003881 ORTHO05D004343 0.0e+00 1234.6 963 67.7
AUR62028984 Chenopodium quinoa HOM05D003881 ORTHO05D004343 0.0e+00 1229.2 961 65.6
Ah.14g084990 Amaranthus hybridus HOM05D003881 ORTHO05D004343 0.0e+00 1212.2 1051 62.9
EL10Ac8g19107 Beta vulgaris HOM05D003881 ORTHO05D004343 0.0e+00 1189.9 1124 57.9
Duzib150G0508 Durio zibethinus HOM05D003881 ORTHO05D004343 0.0e+00 1184.1 936 67.0
Zm00001eb073540 Zea mays HOM05D003881 ORTHO05D004343 0.0e+00 1170.6 1024 63.9
AUR62025189 Chenopodium quinoa HOM05D003881 ORTHO05D004343 0.0e+00 1161.4 992 62.2
Mapoly0010s0036 Marchantia polymorpha HOM05D003881 ORTHO05D004343 0.0e+00 1113.2 946 60.0
SMO143G0189 Selaginella moellendorffii HOM05D003881 ORTHO05D004343 0.0e+00 1099.7 1008 57.3
unitig_8.g3529 Utricularia gibba HOM05D003881 ORTHO05D004343 0.0e+00 1090.1 994 61.1
Solyc07g041510.3 Solanum lycopersicum HOM05D003881 ORTHO05D004343 0.0e+00 1087.8 735 76.5
Sopen07g027960 Solanum pennellii HOM05D003674 ORTHO05D004343 0.0e+00 1087.4 733 76.5
AagrBONN_evm.TU.Sc2ySwM_344.1648 Anthoceros agrestis HOM05D003881 ORTHO05D004343 4.1e-297 1025.0 1006 53.7
Peaxi162Scf00127g00019 Petunia axillaris HOM05D003881 ORTHO05D004343 4.7e-269 931.8 730 68.2
Cpa.g.sc28.63 Carica papaya HOM05D003881 ORTHO05D004343 4.6e-256 888.6 699 66.8
Pp3c3_17140 Physcomitrium patens HOM05D003881 ORTHO05D004343 6.0e-248 861.7 811 54.5
TAR383G0903 Trochodendron aralioides HOM05D003881 ORTHO05D004343 8.4e-234 814.7 613 69.3
CARHR103800 Cardamine hirsuta HOM05D003881 ORTHO05D004343 1.2e-219 767.7 694 59.5
HPP92_007226 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.0e-170 605.1 637 53.1
TAR383G0300 Trochodendron aralioides HOM05D003881 ORTHO05D004343 2.7e-168 597.0 383 79.9
CARHR103810 Cardamine hirsuta HOM05D003881 ORTHO05D004343 2.3e-146 524.2 318 81.4
Os07g0476200 Oryza sativa ssp. japonica HOM05D003881 ORTHO05D004343 5.0e-146 523.1 429 63.6
Sopen07g021070 Solanum pennellii HOM05D003881 ORTHO05D004343 4.9e-125 453.4 313 84.3
Peaxi162Scf00127g00018 Petunia axillaris HOM05D003881 ORTHO05D004343 2.7e-123 447.6 280 81.1
CBR_g74629 Chara braunii HOM05D003881 ORTHO05D004343 6.9e-111 406.4 376 54.8
SEGI_36108 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 1.3e-104 385.6 507 47.3
SHI23794 Sapria himalayana HOM05D003881 ORTHO05D004343 3.3e-89 334.3 325 56.6
QL03p010974 Quercus lobata HOM05D003881 ORTHO05D004343 3.8e-77 294.3 343 58.6
Psat4g185720 Pisum sativum HOM05D003881 ORTHO05D004343 2.7e-75 288.1 207 71.5
MCO14G023 Micromonas commoda HOM05D003881 ORTHO05D004343 2.4e-71 275.0 1094 26.0
QL01p053501 Quercus lobata HOM05D003881 ORTHO05D004343 4.2e-68 264.2 263 55.5
QL04p095684 Quercus lobata HOM05D003881 ORTHO05D004343 3.3e-65 254.6 260 54.2
Cre03.g189605 Chlamydomonas reinhardtii HOM05D003881 ORTHO05D004343 3.5e-62 244.6 1105 25.8
Zm00001eb329800 Zea mays HOM05D003881 ORTHO05D004343 4.5e-62 244.2 187 64.7
ATR0684G009 Amborella trichopoda HOM05D003881 ORTHO05D004343 1.2e-57 229.6 386 37.3
SEGI_33062 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 7.7e-54 216.9 145 71.0
CSS0024068 Camellia sinensis var. sinensis HOM05D003881 ORTHO05D004343 1.3e-45 189.5 99 88.9
ATR0193G014 Amborella trichopoda HOM05D003881 ORTHO05D004343 9.5e-44 183.3 107 86.0
Thhalv10002929m.g Eutrema salsugineum HOM05D003881 ORTHO05D004343 8.8e-42 176.8 217 46.5
QL10p021459 Quercus lobata HOM05D000176 ORTHO05D000106 2.0e-41 175.6 141 65.2
ATR0193G031 Amborella trichopoda HOM05D003881 ORTHO05D004343 2.2e-40 172.2 107 77.6
HPP92_012481 Vanilla planifolia HOM05D003881 ORTHO05D004343 2.8e-40 171.8 149 60.4
MD15G1215900 Malus domestica HOM05D003881 ORTHO05D004343 1.4e-39 169.5 248 44.8
Lsat_1_v5_gn_3_15640 Lactuca sativa HOM05D003881 ORTHO05D004343 3.1e-39 168.3 103 75.7
CBR_g74627 Chara braunii HOM05D003881 ORTHO05D004343 1.7e-37 162.5 253 39.1
Psat1g224080 Pisum sativum HOM05D003881 ORTHO05D004343 3.7e-32 144.8 89 77.5
ATR0684G059 Amborella trichopoda HOM05D003881 ORTHO05D004343 5.9e-30 137.5 93 76.3
HPP92_026934 Vanilla planifolia HOM05D003881 ORTHO05D004343 3.6e-27 128.3 175 42.9
HPP92_006853 Vanilla planifolia HOM05D003881 ORTHO05D004343 9.8e-25 120.2 89 69.7
Psat1g034120 Pisum sativum HOM05D003881 ORTHO05D004343 1.1e-23 116.7 86 70.9
SEGI_35060 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 1.1e-20 106.7 119 48.7
HPP92_006870 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.1e-20 106.7 125 54.4
Hma1.2p1_0528F.1_g173040 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 4.3e-20 104.8 108 56.5
Hma1.2p1_0980F.1_g243635 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 4.3e-20 104.8 108 56.5
Hma1.2p1_1385F.1_g279633 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 4.3e-20 104.8 108 56.5
Rhsim03G0229000 Rhododendron simsii HOM05D003881 ORTHO05D004343 7.3e-20 104.0 97 64.9
SEGI_29160 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 2.8e-19 102.1 119 45.4
Psat0s7528g0040 Pisum sativum HOM05D003881 ORTHO05D004343 8.1e-19 100.5 64 73.4
SEGI_26438 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 2.3e-18 99.0 59 81.4
Psat1g059560 Pisum sativum HOM05D003881 ORTHO05D004343 5.2e-18 97.8 64 71.9
SEGI_15507 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 1.7e-16 92.8 78 59.0
SEGI_11752 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 2.9e-16 92.0 134 41.8
Hma1.2p1_0508F.1_g168780 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 2.4e-15 89.0 79 59.5
RcHm_v2.0_Chr5g0007121 Rosa chinensis HOM05D003881 ORTHO05D004343 7.1e-15 87.4 51 80.4
TPR.G10985 Trifolium pratense HOM05D003881 ORTHO05D004343 7.1e-15 87.4 47 93.6
Hma1.2p1_0430F.1_g151320 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 1.6e-14 86.3 62 71.0
Actinidia38472 Actinidia chinensis HOM05D003881 ORTHO05D004343 2.3e-13 82.4 267 28.8
SEGI_23032 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 2.3e-13 82.4 106 45.3
SEGI_39855 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 3.0e-13 82.0 80 52.5
vmacro22673 Vaccinium macrocarpon HOM05D003881 ORTHO05D004343 3.0e-13 82.0 142 44.4
HPP92_028483 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.9e-12 79.3 65 55.4
HPP92_012555 Vanilla planifolia HOM05D003881 ORTHO05D004343 7.3e-12 77.4 98 50.0
CBR_g74625 Chara braunii HOM05D003881 ORTHO05D004343 9.2e-07 60.5 66 48.5
BolC7t41346H Brassica oleracea HOM05D003881 ORTHO05D004343 1.2e-06 60.1 60 53.3
SEGI_10645 Sequoiadendron giganteum HOM05D000563 ORTHO05D006573 3.5e-06 58.5 51 54.9
SEGI_25641 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 6.0e-06 57.8 67 50.7


User provided reference genes

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