Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu018063.1 Olea europaea HOM05D007315 ORTHO05D008940 0.0e+00 1091.3 548 100.0
MSTRG.24547 Avicennia marina HOM05D007315 ORTHO05D008940 2.0e-82 310.8 614 38.6
Dinv33248 Davidia involucrata HOM05D007315 ORTHO05D008940 1.2e-77 295.0 586 38.1
Rhsim09G0003400 Rhododendron simsii HOM05D007315 ORTHO05D008940 4.8e-76 289.7 492 41.5
CSS0005699 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 4.1e-75 286.6 485 40.6
DCAR_027494 Daucus carota HOM05D007315 ORTHO05D008940 7.0e-75 285.8 568 39.6
Haze_11126 Corylus avellana HOM05D007315 ORTHO05D008940 1.5e-72 278.1 468 40.2
Cfa008519 Carpinus fangiana HOM05D007315 ORTHO05D008940 9.4e-72 275.4 570 36.8
SalBow3G0669 Salvia bowleyana HOM05D007315 ORTHO05D008940 2.0e-69 267.7 552 39.1
Potri.007G145400 Populus trichocarpa HOM05D007315 ORTHO05D008940 3.4e-69 266.9 592 35.6
GSVIVG01038254001 Vitis vinifera HOM05D007315 ORTHO05D008940 3.4e-69 266.9 582 37.6
CiPaw.02G125100 Carya illinoinensis HOM05D007315 ORTHO05D008940 1.4e-67 261.5 462 38.1
QL10p064604 Quercus lobata HOM05D007315 ORTHO05D008940 9.2e-67 258.8 575 35.8
Potri.017G002200 Populus trichocarpa HOM05D007315 ORTHO05D008940 3.5e-66 256.9 584 35.4
CSS0008240 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 3.8e-65 253.4 484 37.8
PGSC0003DMG400020383 Solanum tuberosum HOM05D007315 ORTHO05D008940 3.8e-65 253.4 602 37.4
QL10p065726 Quercus lobata HOM05D007315 ORTHO05D008940 2.5e-64 250.8 574 34.8
Sabra07G0115600 Salix brachista HOM05D007315 ORTHO05D008940 1.6e-63 248.1 599 34.6
Atru.chr3.1974 Acer truncatum HOM05D007315 ORTHO05D008940 8.0e-63 245.7 506 37.9
CANSAT78G2341 Cannabis sativa HOM05D007315 ORTHO05D008940 1.8e-62 244.6 579 34.9
Peaxi162Scf00057g00225 Petunia axillaris HOM05D007315 ORTHO05D008940 5.2e-62 243.0 576 37.8
Duzib128G0490 Durio zibethinus HOM05D007315 ORTHO05D008940 2.0e-61 241.1 495 38.6
Manes.05G207100 Manihot esculenta HOM05D007315 ORTHO05D008940 2.0e-61 241.1 585 36.1
Solyc12g017970.1 Solanum lycopersicum HOM05D007315 ORTHO05D008940 2.6e-61 240.7 595 36.1
Ciclev10019166m.g Citrus clementina HOM05D007315 ORTHO05D008940 4.4e-61 240.0 569 34.3
TAR362G0103 Trochodendron aralioides HOM05D007315 ORTHO05D008940 7.5e-61 239.2 478 36.6
Sabra17G0006200 Salix brachista HOM05D007315 ORTHO05D008940 2.2e-60 237.7 589 34.8
RcHm_v2.0_Chr2g0084511 Rosa chinensis HOM05D007315 ORTHO05D008940 6.4e-60 236.1 479 35.7
Sopen12g009190 Solanum pennellii HOM05D007315 ORTHO05D008940 1.8e-59 234.6 595 35.8
TWI15G1252 Tripterygium wilfordii HOM05D007315 ORTHO05D008940 1.2e-58 231.9 551 34.1
Nitab4.5_0002789g0030 Nicotiana tabacum HOM05D007315 ORTHO05D008940 2.7e-58 230.7 573 36.0
Nitab4.5_0000160g0040 Nicotiana tabacum HOM05D007315 ORTHO05D008940 1.7e-57 228.0 522 38.3
Migut.N03024 Erythranthe guttata HOM05D007315 ORTHO05D008940 1.1e-56 225.3 588 34.9
Gorai.011G004300 Gossypium raimondii HOM05D007315 ORTHO05D008940 1.1e-56 225.3 487 36.3
Prupe.7G270200 Prunus persica HOM05D007315 ORTHO05D008940 1.1e-56 225.3 496 34.9
Thecc.05G001400 Theobroma cacao HOM05D007315 ORTHO05D008940 1.1e-56 225.3 489 37.0
MD15G1142800 Malus domestica HOM05D007315 ORTHO05D008940 4.3e-56 223.4 489 35.4
Nn1g09432 Nelumbo nucifera HOM05D007315 ORTHO05D008940 5.6e-56 223.0 476 35.7
Gohir.D10G003900 Gossypium hirsutum HOM05D007315 ORTHO05D008940 4.7e-55 219.9 559 33.6
Hma1.2p1_1085F.1_g255400 Hydrangea macrophylla HOM05D007315 ORTHO05D008940 1.8e-54 218.0 471 35.5
FAN28G1745 Fragaria x ananassa HOM05D007315 ORTHO05D008940 2.3e-54 217.6 563 33.6
ClCG06G009750 Citrullus lanatus HOM05D007315 ORTHO05D008940 4.0e-54 216.9 467 35.5
FAN26G2088 Fragaria x ananassa HOM05D007315 ORTHO05D008940 5.2e-54 216.5 473 35.1
FAN26G2097 Fragaria x ananassa HOM05D007315 ORTHO05D008940 5.2e-54 216.5 473 35.1
ECA238G3268 Erigeron canadensis HOM05D007315 ORTHO05D008940 6.8e-54 216.1 491 33.0
FAN23G0376 Fragaria x ananassa HOM05D007315 ORTHO05D008940 6.8e-54 216.1 474 35.0
Glyma.10G188000 Glycine max HOM05D007315 ORTHO05D008940 3.4e-53 213.8 525 34.7
Gohir.A10G003901 Gossypium hirsutum HOM05D007315 ORTHO05D008940 5.8e-53 213.0 560 33.0
Eucgr.A00422 Eucalyptus grandis HOM05D007315 ORTHO05D008940 7.5e-53 212.6 578 32.4
Sed0008861 Sechium edule HOM05D007315 ORTHO05D008940 1.7e-52 211.5 467 36.2
AUR62002486 Chenopodium quinoa HOM05D007315 ORTHO05D008940 3.7e-52 210.3 504 32.3
MELO3C020340.2 Cucumis melo HOM05D007315 ORTHO05D008940 1.9e-51 208.0 472 35.0
FvH4_1g00220 Fragaria vesca HOM05D007315 ORTHO05D008940 2.4e-51 207.6 474 34.2
CsaV3_2G011220 Cucumis sativus L. HOM05D007315 ORTHO05D008940 3.5e-50 203.8 466 34.3
AUR62023706 Chenopodium quinoa HOM05D007315 ORTHO05D008940 4.6e-50 203.4 512 32.2
PGR042G2132 Punica granatum HOM05D007315 ORTHO05D008940 7.8e-50 202.6 569 33.7
Cpa.g.sc151.10 Carica papaya HOM05D007315 ORTHO05D008940 2.5e-48 197.6 477 34.2
THA.LOC104802348 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 3.3e-48 197.2 585 30.6
EL10Ac3g06171 Beta vulgaris HOM05D007315 ORTHO05D008940 5.6e-48 196.4 466 33.7
CiPaw.01G202000 Carya illinoinensis HOM05D007315 ORTHO05D008940 2.1e-47 194.5 471 33.1
COL.COLO4_23477 Corchorus olitorius HOM05D007315 ORTHO05D008940 2.1e-47 194.5 522 33.9
Lj5g0028022 Lotus japonicus HOM05D007315 ORTHO05D008940 3.6e-47 193.7 572 33.0
THA.LOC104804323 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 3.7e-44 183.7 543 30.6
HanXRQChr14g0438301 Helianthus annuus HOM05D007315 ORTHO05D008940 4.9e-44 183.3 486 32.3
Atru.chr3.1981 Acer truncatum HOM05D007315 ORTHO05D008940 9.2e-43 179.1 407 36.6
SGA_v2.0_scaffold19G08894 Striga asiatica HOM05D007315 ORTHO05D008940 9.2e-43 179.1 584 30.5
Phvul.007G128900 Phaseolus vulgaris HOM05D007315 ORTHO05D008940 2.1e-42 177.9 483 33.5
VMungo0720G0938 Vigna mungo HOM05D007315 ORTHO05D008940 6.0e-42 176.4 459 32.7
Thhalv10001359m.g Eutrema salsugineum HOM05D007315 ORTHO05D008940 1.3e-41 175.3 473 34.5
Glyma.20G202800 Glycine max HOM05D007315 ORTHO05D008940 3.0e-41 174.1 578 32.0
PSO732G0261 Papaver somniferum HOM05D007315 ORTHO05D008940 3.0e-41 174.1 483 33.3
Lalb_Chr02g0150561 Lupinus albus HOM05D007315 ORTHO05D008940 1.5e-40 171.8 566 30.9
Medtr1g073930 Medicago truncatula HOM05D007315 ORTHO05D008940 1.6e-39 168.3 558 30.6
arahy.Tifrunner.gnm1.ann1.K0K7GF Arachis hypogaea HOM05D007315 ORTHO05D008940 2.3e-38 164.5 473 33.2
AL4G42870 Arabidopsis lyrata HOM05D007315 ORTHO05D008940 3.1e-38 164.1 478 33.1
Sp4g26080 Schrenkiella parvula HOM05D007315 ORTHO05D008940 4.0e-38 163.7 500 31.8
Psat6g133000 Pisum sativum HOM05D007315 ORTHO05D008940 1.5e-37 161.8 567 30.7
AT2G43990 Arabidopsis thaliana HOM05D007315 ORTHO05D008940 2.6e-37 161.0 478 33.1
Ca_09817_v3 Cicer arietinum L. HOM05D007315 ORTHO05D008940 1.7e-36 158.3 578 29.9
SGA_v2.0_scaffold25G11016 Striga asiatica HOM05D007315 ORTHO05D008940 2.2e-36 157.9 574 30.5
MBI07_g42068_MAGBIO Magnolia biondii HOM05D007315 ORTHO05D008940 2.9e-36 157.5 535 31.8
TPR.G26430 Trifolium pratense HOM05D007315 ORTHO05D008940 3.8e-36 157.1 575 31.3
arahy.Tifrunner.gnm1.ann1.BRX18T Arachis hypogaea HOM05D007315 ORTHO05D008940 8.4e-36 156.0 514 32.5
Carub.0004s2655 Capsella rubella HOM05D007315 ORTHO05D008940 3.2e-35 154.1 476 32.8
Sc19g0002390 Simmondsia chinensis HOM05D007315 ORTHO05D008940 9.2e-35 152.5 394 32.2
Ah.13g073150 Amaranthus hybridus HOM05D007315 ORTHO05D008940 1.3e-33 148.7 464 30.4
Ah.07g203260 Amaranthus hybridus HOM05D007315 ORTHO05D008940 3.9e-33 147.1 385 33.5
CARHR139160 Cardamine hirsuta HOM05D007315 ORTHO05D008940 4.3e-32 143.7 570 28.8
CDE04G0399 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 2.8e-31 141.0 524 29.6
COL.COLO4_20289 Corchorus olitorius HOM05D007315 ORTHO05D008940 2.1e-26 124.8 266 35.0
Aqoxy5G03722 Aquilegia oxysepala HOM05D007315 ORTHO05D008940 1.3e-25 122.1 468 31.0
A05p04140 Brassica napus HOM05D007315 ORTHO05D008940 5.1e-25 120.2 338 34.9
MD00G1086900 Malus domestica HOM05D007315 ORTHO05D008940 2.8e-23 114.4 333 32.1
C04p04910 Brassica napus HOM05D007315 ORTHO05D008940 6.2e-23 113.2 339 33.3
BolC4t22121H Brassica oleracea HOM05D007315 ORTHO05D008940 6.2e-23 113.2 339 33.3
BraA05t19400Z Brassica rapa HOM05D007315 ORTHO05D008940 2.4e-22 111.3 335 34.3
CDE07G0865 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 5.3e-22 110.2 388 31.2
QL10p064445 Quercus lobata HOM05D007315 ORTHO05D008940 8.4e-20 102.8 247 34.8
HPP92_007592 Vanilla planifolia HOM05D007315 ORTHO05D008940 1.4e-19 102.1 466 25.8
unitig_578.g16246 Utricularia gibba HOM05D007315 ORTHO05D008940 7.1e-19 99.8 166 39.2
BcaC02g12347 Brassica carinata HOM05D007315 ORTHO05D008940 9.3e-19 99.4 150 41.3
Zm00001eb434100 Zea mays HOM05D019859 ORTHO05D008940 1.1e-14 85.9 484 25.8
Os11g0247500 Oryza sativa ssp. japonica HOM05D019859 ORTHO05D008940 5.8e-13 80.1 506 27.5
Duzib093G0367 Durio zibethinus HOM05D007315 ORTHO05D008940 1.3e-12 79.0 314 28.0
Actinidia39246 Actinidia chinensis HOM05D007315 ORTHO05D008940 2.9e-12 77.8 290 29.0
ATR0743G232 Amborella trichopoda HOM05D007315 ORTHO05D008940 1.0e-09 69.3 131 42.0
Zm00001eb136730 Zea mays HOM05D019859 ORTHO05D008940 8.7e-09 66.2 379 26.9
SEGI_20190 Sequoiadendron giganteum HOM05D007315 ORTHO05D008940 1.4e-06 58.9 112 39.3


User provided reference genes

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