Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu018049.1 Olea europaea HOM05D005615 ORTHO05D007558 4.4e-217 757.7 380 100.0
SGA_v2.0_scaffold283G46961 Striga asiatica HOM05D005615 ORTHO05D007558 5.4e-191 671.0 377 89.4
Migut.N03069 Erythranthe guttata HOM05D005615 ORTHO05D007558 1.2e-190 669.8 380 90.0
Cc03_g13240 Coffea canephora HOM05D005615 ORTHO05D007558 8.9e-186 653.7 360 90.6
Nitab4.5_0010690g0020 Nicotiana tabacum HOM05D005615 ORTHO05D007558 9.8e-185 650.2 377 85.9
Actinidia34618 Actinidia chinensis HOM05D005615 ORTHO05D007558 1.3e-184 649.8 380 85.0
Solyc06g073470.3 Solanum lycopersicum HOM05D005615 ORTHO05D007558 2.8e-184 648.7 377 85.7
Sopen06g029830 Solanum pennellii HOM05D005615 ORTHO05D007558 2.8e-184 648.7 377 85.7
GSVIVG01010734001 Vitis vinifera HOM05D005615 ORTHO05D007558 3.7e-184 648.3 376 84.6
PGSC0003DMG400026904 Solanum tuberosum HOM05D005615 ORTHO05D007558 4.9e-184 647.9 377 85.4
Dinv44241 Davidia involucrata HOM05D005615 ORTHO05D007558 8.3e-184 647.1 363 88.4
Atru.chr3.1563 Acer truncatum HOM05D005615 ORTHO05D007558 3.1e-183 645.2 374 85.8
Atru.chr3.1585 Acer truncatum HOM05D005615 ORTHO05D007558 3.1e-183 645.2 374 85.8
QL10p047743 Quercus lobata HOM05D005615 ORTHO05D007558 4.1e-183 644.8 372 85.2
MSTRG.22029 Avicennia marina HOM05D005615 ORTHO05D007558 5.4e-183 644.4 381 86.6
Thecc.05G003200 Theobroma cacao HOM05D005615 ORTHO05D007558 1.2e-182 643.3 362 87.0
Nitab4.5_0002368g0110 Nicotiana tabacum HOM05D005615 ORTHO05D007558 1.6e-182 642.9 376 84.8
Rhsim09G0030100 Rhododendron simsii HOM05D005615 ORTHO05D007558 1.6e-182 642.9 381 84.8
Dinv22646 Davidia involucrata HOM05D005615 ORTHO05D007558 2.7e-182 642.1 379 83.9
BraA05t19360Z Brassica rapa HOM05D005615 ORTHO05D007558 1.7e-181 639.4 379 84.4
Duzib093G1513 Durio zibethinus HOM05D005615 ORTHO05D007558 2.3e-181 639.0 362 86.2
Carub.0004s2582 Capsella rubella HOM05D005615 ORTHO05D007558 5.0e-181 637.9 382 82.5
BcaB01g03390 Brassica carinata HOM05D005615 ORTHO05D007558 6.6e-181 637.5 372 84.7
A05p03730 Brassica napus HOM05D005615 ORTHO05D007558 6.6e-181 637.5 379 84.2
CARHR138440 Cardamine hirsuta HOM05D005615 ORTHO05D007558 6.6e-181 637.5 378 83.9
Aa31LG1G25060 Aethionema arabicum HOM05D005615 ORTHO05D007558 1.5e-180 636.3 378 84.4
A03p24210 Brassica napus HOM05D005615 ORTHO05D007558 1.9e-180 636.0 371 84.4
BraA03t11630Z Brassica rapa HOM05D005615 ORTHO05D007558 1.9e-180 636.0 371 84.4
BcaC02g12407 Brassica carinata HOM05D005615 ORTHO05D007558 3.3e-180 635.2 379 83.9
C04p04420 Brassica napus HOM05D005615 ORTHO05D007558 5.6e-180 634.4 379 83.6
Aqoxy2G04109 Aquilegia oxysepala HOM05D005615 ORTHO05D007558 9.5e-180 633.6 367 84.2
BolC4t22075H Brassica oleracea HOM05D005615 ORTHO05D007558 1.6e-179 632.9 379 83.1
Manes.04G040500 Manihot esculenta HOM05D005615 ORTHO05D007558 1.6e-179 632.9 384 82.6
AL4G42040 Arabidopsis lyrata HOM05D005615 ORTHO05D007558 2.1e-179 632.5 379 82.8
Sp4g25460 Schrenkiella parvula HOM05D005615 ORTHO05D007558 2.1e-179 632.5 380 82.6
PGR083G0205 Punica granatum HOM05D005615 ORTHO05D007558 2.8e-179 632.1 368 85.3
AT2G43360 Arabidopsis thaliana HOM05D005615 ORTHO05D007558 4.7e-179 631.3 382 82.2
unitig_736.g22473 Utricularia gibba HOM05D005615 ORTHO05D007558 4.7e-179 631.3 377 83.0
VMungo1127G1033 Vigna mungo HOM05D005615 ORTHO05D007558 4.7e-179 631.3 379 83.4
Glyma.11G094200 Glycine max HOM05D005615 ORTHO05D007558 6.1e-179 630.9 377 83.0
Phvul.011G023300 Phaseolus vulgaris HOM05D005615 ORTHO05D007558 6.1e-179 630.9 378 83.3
Eucgr.A00054 Eucalyptus grandis HOM05D005615 ORTHO05D007558 1.0e-178 630.2 358 86.9
Glyma.12G020600 Glycine max HOM05D005615 ORTHO05D007558 1.0e-178 630.2 377 83.3
CiPaw.02G056100 Carya illinoinensis HOM05D005615 ORTHO05D007558 1.4e-178 629.8 362 84.5
Eucgr.A00256 Eucalyptus grandis HOM05D005615 ORTHO05D007558 4.0e-178 628.2 359 86.9
Thhalv10001495m.g Eutrema salsugineum HOM05D005615 ORTHO05D007558 5.2e-178 627.9 381 81.4
Lalb_Chr01g0001081 Lupinus albus HOM05D005615 ORTHO05D007558 5.2e-178 627.9 379 81.5
ClCG08G004320 Citrullus lanatus HOM05D005615 ORTHO05D007558 6.8e-178 627.5 386 81.1
DCAR_029917 Daucus carota HOM05D005615 ORTHO05D007558 6.8e-178 627.5 377 82.0
MD04G1037300 Malus domestica HOM05D005615 ORTHO05D007558 6.8e-178 627.5 384 81.5
arahy.Tifrunner.gnm1.ann1.2A1XYJ Arachis hypogaea HOM05D005615 ORTHO05D007558 8.9e-178 627.1 352 87.5
Gohir.D01G221300 Gossypium hirsutum HOM05D005615 ORTHO05D007558 8.9e-178 627.1 375 82.9
Gorai.002G267900 Gossypium raimondii HOM05D005615 ORTHO05D007558 8.9e-178 627.1 375 82.9
HanXRQChr14g0434901 Helianthus annuus HOM05D005615 ORTHO05D007558 1.5e-177 626.3 382 84.0
TAR362G0587 Trochodendron aralioides HOM05D005615 ORTHO05D007558 1.5e-177 626.3 371 83.8
ECA238G2991 Erigeron canadensis HOM05D005615 ORTHO05D007558 2.6e-177 625.5 366 85.2
Lsat_1_v5_gn_2_52041 Lactuca sativa HOM05D005615 ORTHO05D007558 2.6e-177 625.5 354 87.0
Zm00001eb037230 Zea mays HOM05D005615 ORTHO05D007558 2.6e-177 625.5 379 82.6
Ciclev10020553m.g Citrus clementina HOM05D005615 ORTHO05D007558 3.4e-177 625.2 365 84.4
CsaV3_6G003770 Cucumis sativus L. HOM05D005615 ORTHO05D007558 4.4e-177 624.8 385 80.8
Lj3g0021315 Lotus japonicus HOM05D005615 ORTHO05D007558 4.4e-177 624.8 378 82.0
PSO675G8272 Papaver somniferum HOM05D005615 ORTHO05D007558 9.8e-177 623.6 380 81.6
Potri.017G033300 Populus trichocarpa HOM05D005615 ORTHO05D007558 9.8e-177 623.6 376 81.4
Os08g0540100 Oryza sativa ssp. japonica HOM05D005615 ORTHO05D007558 2.2e-176 622.5 381 82.4
Nn7g37651 Nelumbo nucifera HOM05D005615 ORTHO05D007558 2.9e-176 622.1 379 81.8
PSO017G2630 Papaver somniferum HOM05D005615 ORTHO05D007558 6.4e-176 620.9 381 81.1
Sed0015751 Sechium edule HOM05D005615 ORTHO05D007558 6.4e-176 620.9 385 79.7
TWI36G1239 Tripterygium wilfordii HOM05D005615 ORTHO05D007558 1.1e-175 620.2 375 81.9
CANSAT78G0163 Cannabis sativa HOM05D005615 ORTHO05D007558 1.4e-175 619.8 384 81.0
THA.LOC104803617 Tarenaya hassleriana HOM05D005615 ORTHO05D007558 1.4e-175 619.8 382 81.4
Cfa015769 Carpinus fangiana HOM05D005615 ORTHO05D007558 1.8e-175 619.4 373 82.0
Potri.007G126400 Populus trichocarpa HOM05D005615 ORTHO05D007558 1.8e-175 619.4 380 80.8
Medtr4g076870 Medicago truncatula HOM05D005615 ORTHO05D007558 2.4e-175 619.0 381 81.4
Sabra17G0020900 Salix brachista HOM05D005615 ORTHO05D007558 4.1e-175 618.2 376 79.8
Gohir.A01G231200 Gossypium hirsutum HOM05D005615 ORTHO05D007558 5.4e-175 617.8 377 82.2
Sc13g0007050 Simmondsia chinensis HOM05D005615 ORTHO05D007558 5.4e-175 617.8 359 83.8
Hund03143 Selenicereus undatus HOM05D005615 ORTHO05D007558 7.0e-175 617.5 379 81.5
Psat7g172600 Pisum sativum HOM05D005615 ORTHO05D007558 9.2e-175 617.1 361 83.1
Sabra07G0102500 Salix brachista HOM05D005615 ORTHO05D007558 9.2e-175 617.1 382 81.2
Lalb_Chr03g0024511 Lupinus albus HOM05D005615 ORTHO05D007558 2.0e-174 615.9 378 80.4
RcHm_v2.0_Chr4g0408131 Rosa chinensis HOM05D005615 ORTHO05D007558 4.6e-174 614.8 351 84.0
Ca_26061_v3 Cicer arietinum L. HOM05D005615 ORTHO05D007558 6.0e-174 614.4 387 80.1
Haze_00733 Corylus avellana HOM05D005615 ORTHO05D007558 6.0e-174 614.4 379 81.3
TPR.G13757 Trifolium pratense HOM05D005615 ORTHO05D007558 3.0e-173 612.1 384 79.4
FAN17G1451 Fragaria x ananassa HOM05D005615 ORTHO05D007558 5.0e-173 611.3 388 78.4
AUR62034151 Chenopodium quinoa HOM05D005615 ORTHO05D007558 8.6e-173 610.5 382 80.6
EL10Ac3g05574 Beta vulgaris HOM05D005615 ORTHO05D007558 1.5e-172 609.8 382 80.1
SGA_v2.0_scaffold12G06187 Striga asiatica HOM05D005615 ORTHO05D007558 1.9e-172 609.4 395 79.7
MELO3C011628.2 Cucumis melo HOM05D005615 ORTHO05D007558 2.5e-172 609.0 385 78.4
AUR62016250 Chenopodium quinoa HOM05D005615 ORTHO05D007558 4.3e-172 608.2 363 82.6
ATR0743G064 Amborella trichopoda HOM05D005615 ORTHO05D007558 1.2e-169 600.1 336 86.3
arahy.Tifrunner.gnm1.ann1.VQKS2I Arachis hypogaea HOM05D005615 ORTHO05D007558 2.6e-169 599.0 352 84.9
SEGI_32939 Sequoiadendron giganteum HOM05D005615 ORTHO05D007558 5.8e-169 597.8 328 87.5
Mapoly0041s0099 Marchantia polymorpha HOM05D005615 ORTHO05D007558 2.2e-168 595.9 358 81.6
CDE07G0588 Ceratophyllum demersum HOM05D005615 ORTHO05D007558 8.3e-168 594.0 351 83.8
Pp3c11_17440 Physcomitrium patens HOM05D005615 ORTHO05D007558 1.5e-164 583.2 370 77.8
Pp3c1_16250 Physcomitrium patens HOM05D005615 ORTHO05D007558 5.2e-162 574.7 356 80.1
MBI11_g35028_MAGBIO Magnolia biondii HOM05D005615 ORTHO05D007558 1.3e-160 570.1 380 78.4
SMO358G0150 Selaginella moellendorffii HOM05D005615 ORTHO05D007558 1.7e-160 569.7 339 80.5
Lj6A60G37 Lonicera japonica HOM05D005615 ORTHO05D007558 8.3e-160 567.4 315 89.8
Ciclev10024495m.g Citrus clementina HOM05D005615 ORTHO05D007558 4.1e-159 565.1 365 77.8
BcaC01g05236 Brassica carinata HOM05D005615 ORTHO05D007558 9.5e-156 553.9 375 75.5
BolC3t15243H Brassica oleracea HOM05D005615 ORTHO05D007558 1.5e-153 546.6 368 75.3
AagrBONN_evm.TU.Sc2ySwM_362.1417 Anthoceros agrestis HOM05D003321 ORTHO05D005161 7.8e-150 534.3 333 76.9
AagrBONN_evm.TU.Sc2ySwM_344.4725 Anthoceros agrestis HOM05D005615 ORTHO05D007558 8.4e-144 514.2 348 71.0
Ciclev10024062m.g Citrus clementina HOM05D005615 ORTHO05D007558 2.4e-138 496.1 353 72.5
Cpa.g.sc71.17 Carica papaya HOM05D005615 ORTHO05D007558 3.3e-132 475.7 276 84.4
Prupe.1G186700 Prunus persica HOM05D005615 ORTHO05D007558 4.0e-130 468.8 266 86.1
CAN.G65.188 Capsicum annuum HOM05D005615 ORTHO05D007558 4.9e-128 461.8 260 87.7
HPP92_002777 Vanilla planifolia HOM05D005615 ORTHO05D007558 1.0e-125 454.1 252 86.9
FvH4_4g11460 Fragaria vesca HOM05D005615 ORTHO05D007558 6.7e-125 451.4 286 77.6
HPP92_028241 Vanilla planifolia HOM05D005615 ORTHO05D001525 4.3e-116 422.2 320 69.7
COL.COLO4_14419 Corchorus olitorius HOM05D005615 ORTHO05D007558 1.3e-107 394.0 217 89.9
Cre06.g261150 Chlamydomonas reinhardtii HOM05D005615 ORTHO05D007558 6.3e-107 391.7 356 55.6
MCO13G117 Micromonas commoda HOM05D005615 ORTHO05D007558 8.2e-107 391.3 313 61.7
Peaxi162Scf00375g00079 Petunia axillaris HOM05D005615 ORTHO05D007558 6.1e-102 375.2 222 85.6
Zm00001eb198320 Zea mays HOM05D005615 ORTHO05D007558 8.2e-99 364.8 197 89.8
FAN07G1681 Fragaria x ananassa HOM05D005615 ORTHO05D007558 3.1e-98 362.8 200 84.5
Haze_27367 Corylus avellana HOM05D005615 ORTHO05D007558 1.5e-79 300.8 298 50.7
vmacro00603 Vaccinium macrocarpon HOM05D005615 ORTHO05D007558 9.8e-76 288.1 234 64.1
AL3G36550 Arabidopsis lyrata HOM05D005615 ORTHO05D007558 3.2e-58 229.9 121 92.6
CBR_g54828 Chara braunii HOM05D005615 ORTHO05D007558 1.4e-53 214.5 149 67.1
AL4G42060 Arabidopsis lyrata HOM05D005615 ORTHO05D007558 7.5e-52 208.8 208 58.2
Actinidia27060 Actinidia chinensis HOM05D005615 ORTHO05D007558 4.7e-46 189.5 97 90.7
CBR_g54834 Chara braunii HOM05D005615 ORTHO05D007558 3.2e-42 176.8 104 82.7
Cpa.g.sc71.16 Carica papaya HOM05D005615 ORTHO05D007558 2.7e-33 147.1 100 78.0
CBR_g54836 Chara braunii HOM05D005615 ORTHO05D000002 1.1e-31 141.7 106 68.9
SalBow8G4084 Salvia bowleyana HOM05D005615 ORTHO05D007558 1.3e-27 128.3 68 91.2
HPP92_002776 Vanilla planifolia HOM05D005615 ORTHO05D007558 1.7e-27 127.9 82 79.3
Psat3g051440 Pisum sativum HOM05D005615 ORTHO05D031631 8.4e-27 125.6 91 70.3
CDE04G1318 Ceratophyllum demersum HOM05D005615 ORTHO05D007558 1.3e-24 118.2 70 81.4
Cpa.g.c45785 Carica papaya HOM05D005615 ORTHO05D007558 6.6e-24 115.9 60 88.3
Zm00001eb285620 Zea mays HOM05D001443 ORTHO05D001352 4.9e-19 99.8 124 48.4
Eucgr.A00259 Eucalyptus grandis HOM05D005615 ORTHO05D007558 6.4e-19 99.4 74 66.2


User provided reference genes

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