Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017994.1 Olea europaea HOM05D005351 ORTHO05D006542 7.3e-209 730.3 374 100.0
Oeu049420.1 Olea europaea HOM05D005351 ORTHO05D006542 3.0e-69 266.5 261 61.3
Migut.M01635 Erythranthe guttata HOM05D005351 ORTHO05D006542 2.5e-55 220.3 261 54.0
Actinidia03651 Actinidia chinensis HOM05D005351 ORTHO05D006542 4.2e-55 219.5 250 53.6
Peaxi162Scf00018g00155 Petunia axillaris HOM05D005351 ORTHO05D006542 1.2e-54 218.0 251 55.0
Cc05_g15290 Coffea canephora HOM05D005351 ORTHO05D006542 1.6e-54 217.6 269 51.3
SGA_v2.0_scaffold168G38576 Striga asiatica HOM05D005351 ORTHO05D006542 3.6e-54 216.5 255 51.0
PSO210G4843 Papaver somniferum HOM05D005351 ORTHO05D006542 7.9e-54 215.3 294 47.3
MSTRG.15808 Avicennia marina HOM05D005351 ORTHO05D006542 1.4e-53 214.5 259 52.1
Rhsim04G0010500 Rhododendron simsii HOM05D005351 ORTHO05D006542 1.4e-53 214.5 251 53.4
CSS0029070 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 1.8e-53 214.2 255 51.8
CSS0045517 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 2.3e-53 213.8 255 51.8
Nn1g02046 Nelumbo nucifera HOM05D005351 ORTHO05D006542 3.0e-53 213.4 227 55.5
DCAR_013254 Daucus carota HOM05D005351 ORTHO05D006542 8.8e-53 211.8 155 73.5
Nitab4.5_0003328g0090 Nicotiana tabacum HOM05D005351 ORTHO05D006542 8.8e-53 211.8 258 53.5
Nitab4.5_0005478g0030 Nicotiana tabacum HOM05D005351 ORTHO05D006542 4.3e-52 209.5 257 52.5
Duzib213G0009 Durio zibethinus HOM05D005351 ORTHO05D006542 7.4e-52 208.8 255 49.4
Manes.01G003500 Manihot esculenta HOM05D005351 ORTHO05D006542 2.8e-51 206.8 245 51.0
GSVIVG01014743001 Vitis vinifera HOM05D005351 ORTHO05D006542 2.8e-51 206.8 246 50.4
PSO210G4950 Papaver somniferum HOM05D005351 ORTHO05D006542 3.7e-51 206.5 308 44.5
Gohir.D05G384000 Gossypium hirsutum HOM05D005351 ORTHO05D006542 2.4e-50 203.8 152 69.7
Gorai.009G450800 Gossypium raimondii HOM05D005351 ORTHO05D006542 2.4e-50 203.8 152 69.7
Nn3g19476 Nelumbo nucifera HOM05D005351 ORTHO05D006542 4.1e-50 203.0 251 50.6
Phvul.006G059260 Phaseolus vulgaris HOM05D005351 ORTHO05D006542 5.3e-50 202.6 236 50.8
SalBow8G3039 Salvia bowleyana HOM05D005351 ORTHO05D006542 6.9e-50 202.2 156 69.2
COL.COLO4_07741 Corchorus olitorius HOM05D005351 ORTHO05D006542 1.5e-49 201.1 145 70.3
Gohir.A04G005700 Gossypium hirsutum HOM05D005351 ORTHO05D006542 3.4e-49 199.9 153 71.2
PSO782G2183 Papaver somniferum HOM05D005351 ORTHO05D006542 4.5e-49 199.5 152 69.7
Sabra16G0244200 Salix brachista HOM05D005351 ORTHO05D006542 7.7e-49 198.7 276 46.0
PGSC0003DMG400014404 Solanum tuberosum HOM05D005351 ORTHO05D006542 1.0e-48 198.4 255 51.0
TWI38G2212 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 1.0e-48 198.4 253 49.8
TAR626G0279 Trochodendron aralioides HOM05D005351 ORTHO05D006542 1.0e-48 198.4 154 66.9
VMungo0540G1402 Vigna mungo HOM05D005351 ORTHO05D006542 1.7e-48 197.6 236 50.4
Haze_09867 Corylus avellana HOM05D005351 ORTHO05D006542 2.9e-48 196.8 260 50.0
Sopen10g001810 Solanum pennellii HOM05D005351 ORTHO05D006542 2.9e-48 196.8 250 52.0
Potri.001G371600 Populus trichocarpa HOM05D005351 ORTHO05D006542 3.8e-48 196.4 266 47.0
Solyc10g005850.4 Solanum lycopersicum HOM05D005351 ORTHO05D006542 3.8e-48 196.4 256 51.6
Aqoxy1G04296 Aquilegia oxysepala HOM05D005351 ORTHO05D006542 6.5e-48 195.7 230 54.3
TWI38G1324 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 8.5e-48 195.3 255 49.8
HanXRQChr11g0334131 Helianthus annuus HOM05D005351 ORTHO05D006542 1.1e-47 194.9 155 67.1
Prupe.6G028400 Prunus persica HOM05D005351 ORTHO05D006542 1.1e-47 194.9 262 49.6
CAN.G492.50 Capsicum annuum HOM05D005351 ORTHO05D006542 1.9e-47 194.1 255 49.0
MD03G1035400 Malus domestica HOM05D005351 ORTHO05D006542 2.5e-47 193.7 225 55.1
Cfa021891 Carpinus fangiana HOM05D005351 ORTHO05D006542 5.5e-47 192.6 260 48.8
Thecc.07G007900 Theobroma cacao HOM05D005351 ORTHO05D006542 1.6e-46 191.0 143 69.2
Eucgr.F02026 Eucalyptus grandis HOM05D005351 ORTHO05D006542 2.1e-46 190.7 154 65.6
Lalb_Chr15g0082311 Lupinus albus HOM05D005351 ORTHO05D006542 3.6e-46 189.9 154 65.6
RcHm_v2.0_Chr5g0075571 Rosa chinensis HOM05D005351 ORTHO05D006542 3.6e-46 189.9 258 46.1
ClCG09G021540 Citrullus lanatus HOM05D005351 ORTHO05D006542 6.1e-46 189.1 247 48.2
CsaV3_7G023840 Cucumis sativus L. HOM05D005351 ORTHO05D006542 7.9e-46 188.7 150 64.7
Glyma.08G332700 Glycine max HOM05D005351 ORTHO05D006542 1.0e-45 188.3 198 54.5
Lj6g0009098 Lotus japonicus HOM05D005351 ORTHO05D006542 1.8e-45 187.6 212 53.3
Glyma.18G074300 Glycine max HOM05D005351 ORTHO05D006542 3.9e-45 186.4 223 51.1
CiPaw.12G140700 Carya illinoinensis HOM05D005351 ORTHO05D006542 5.1e-45 186.0 259 47.9
PGR083G0334 Punica granatum HOM05D005351 ORTHO05D006542 6.7e-45 185.7 227 52.9
MD11G1037100 Malus domestica HOM05D005351 ORTHO05D006542 2.6e-44 183.7 310 41.6
Ca_12455_v3 Cicer arietinum L. HOM05D005351 ORTHO05D006542 5.7e-44 182.6 232 49.6
QL08p002685 Quercus lobata HOM05D005351 ORTHO05D006542 9.7e-44 181.8 152 66.4
ECA236G3149 Erigeron canadensis HOM05D005351 ORTHO05D006542 1.7e-43 181.0 140 64.3
ATR0751G017 Amborella trichopoda HOM05D005351 ORTHO05D006542 2.2e-43 180.6 293 42.3
Medtr3g461030 Medicago truncatula HOM05D005351 ORTHO05D006542 2.2e-43 180.6 231 51.1
FAN11G1247 Fragaria x ananassa HOM05D005351 ORTHO05D006542 2.8e-43 180.3 259 44.0
FAN25G1298 Fragaria x ananassa HOM05D005351 ORTHO05D006542 2.8e-43 180.3 152 62.5
Hund23091 Selenicereus undatus HOM05D005351 ORTHO05D006542 2.8e-43 180.3 152 65.1
THA.LOC104815687 Tarenaya hassleriana HOM05D005351 ORTHO05D006542 6.3e-43 179.1 284 41.9
Sed0019267 Sechium edule HOM05D005351 ORTHO05D006542 3.1e-42 176.8 151 62.9
AT3G13225 Arabidopsis thaliana HOM05D005351 ORTHO05D006542 4.1e-42 176.4 183 57.9
FAN16G2746 Fragaria x ananassa HOM05D005351 ORTHO05D006542 7.0e-42 175.6 259 43.2
AUR62017130 Chenopodium quinoa HOM05D005351 ORTHO05D006542 1.2e-41 174.9 231 48.1
vmacro09623 Vaccinium macrocarpon HOM05D005351 ORTHO05D006542 1.2e-41 174.9 249 49.8
FAN21G2745 Fragaria x ananassa HOM05D005351 ORTHO05D006542 1.5e-41 174.5 259 42.9
Os06g0298400 Oryza sativa ssp. japonica HOM05D005351 ORTHO05D006542 1.5e-41 174.5 287 43.2
Psat5g166400 Pisum sativum HOM05D005351 ORTHO05D006542 1.5e-41 174.5 200 53.5
TPR.G17956 Trifolium pratense HOM05D005351 ORTHO05D006542 1.5e-41 174.5 155 61.3
unitig_0.g707 Utricularia gibba HOM05D005351 ORTHO05D006542 3.5e-41 173.3 242 45.5
SEGI_31992 Sequoiadendron giganteum HOM05D005351 ORTHO05D006542 5.9e-41 172.6 250 46.8
CANSAT11G0508 Cannabis sativa HOM05D005351 ORTHO05D006542 1.3e-40 171.4 178 55.6
AUR62035679 Chenopodium quinoa HOM05D005351 ORTHO05D006542 1.7e-40 171.0 152 64.5
Zm00001eb381020 Zea mays HOM05D005351 ORTHO05D006542 1.7e-40 171.0 209 50.7
Thhalv10020110m.g Eutrema salsugineum HOM05D005351 ORTHO05D006542 5.0e-40 169.5 154 61.0
CDE05G0998 Ceratophyllum demersum HOM05D005351 ORTHO05D006542 4.2e-39 166.4 138 65.9
AL3G25030 Arabidopsis lyrata HOM05D005351 ORTHO05D006542 5.5e-39 166.0 154 60.4
Ah.06g181500 Amaranthus hybridus HOM05D005351 ORTHO05D006542 1.2e-38 164.9 152 60.5
Carub.0003s1261 Capsella rubella HOM05D005351 ORTHO05D006542 2.1e-38 164.1 254 43.7
A01p40300 Brassica napus HOM05D005351 ORTHO05D006542 3.6e-38 163.3 155 60.0
BraA01t04066Z Brassica rapa HOM05D005351 ORTHO05D006542 3.6e-38 163.3 155 60.0
BcaC09g48295 Brassica carinata HOM05D005351 ORTHO05D006542 6.1e-38 162.5 159 59.7
C01p51820 Brassica napus HOM05D005351 ORTHO05D006542 6.1e-38 162.5 159 59.7
BolC1t05130H Brassica oleracea HOM05D005351 ORTHO05D006542 6.1e-38 162.5 159 59.7
MBI14_g27041_MAGBIO Magnolia biondii HOM05D005351 ORTHO05D006542 1.4e-37 161.4 152 59.2
EL10Ac4g07541 Beta vulgaris HOM05D005351 ORTHO05D006542 1.8e-37 161.0 238 47.1
Sp3g11430 Schrenkiella parvula HOM05D005351 ORTHO05D006542 2.3e-37 160.6 154 57.8
Dinv40885 Davidia involucrata HOM05D005351 ORTHO05D006542 4.4e-36 156.4 194 54.1
Lsat_1_v5_gn_7_114900 Lactuca sativa HOM05D005351 ORTHO05D006542 6.3e-35 152.5 161 54.7
Ciclev10007493m.g Citrus clementina HOM05D005351 ORTHO05D006542 1.1e-34 151.8 259 43.2
Cpa.g.sc12.108 Carica papaya HOM05D005351 ORTHO05D006542 1.4e-34 151.4 224 46.9
Sc03g0011530 Simmondsia chinensis HOM05D005351 ORTHO05D006542 1.6e-33 147.9 130 66.2
CARHR087840 Cardamine hirsuta HOM05D005351 ORTHO05D006542 4.5e-33 146.4 223 43.5
BcaB04g21006 Brassica carinata HOM05D005351 ORTHO05D006542 1.7e-32 144.4 158 54.4
Lj8A180G96 Lonicera japonica HOM05D005351 ORTHO05D006542 1.9e-31 141.0 263 40.7
Hma1.2p1_0193F.1_g083920 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 1.2e-30 138.3 304 36.2
MBI14_g37362_MAGBIO Magnolia biondii HOM05D005351 ORTHO05D006542 1.6e-30 137.9 91 80.2
CDE05G2589 Ceratophyllum demersum HOM05D005351 ORTHO05D006542 2.7e-30 137.1 136 56.6
AagrBONN_evm.TU.Sc2ySwM_368.1722__1723 Anthoceros agrestis HOM05D005351 ORTHO05D006542 6.1e-30 136.0 199 47.2
Zm00001eb281160 Zea mays HOM05D005351 ORTHO05D006542 6.8e-29 132.5 183 45.9
CBR_g12012 Chara braunii HOM05D005351 ORTHO05D006542 2.8e-27 127.1 170 46.5
HPP92_017874 Vanilla planifolia HOM05D005351 ORTHO05D006542 2.8e-27 127.1 220 44.5
Aa31LG8G460 Aethionema arabicum HOM05D005351 ORTHO05D006542 6.3e-27 125.9 134 56.0
Actinidia00844 Actinidia chinensis HOM05D005351 ORTHO05D006542 1.8e-26 124.4 179 49.2
Atru.chr2.3836 Acer truncatum HOM05D005351 ORTHO05D006542 4.1e-26 123.2 185 45.9
arahy.Tifrunner.gnm1.ann1.1R5J8M Arachis hypogaea HOM05D005351 ORTHO05D006542 1.6e-25 121.3 210 41.9
vmacro11082 Vaccinium macrocarpon HOM05D000009 ORTHO05D006542 1.5e-23 114.8 97 64.9
Pp3c7_8580 Physcomitrium patens HOM05D005351 ORTHO05D006542 3.2e-23 113.6 260 34.2
SMO164G0196 Selaginella moellendorffii HOM05D005351 ORTHO05D006542 4.2e-23 113.2 151 45.7
HPP92_028497 Vanilla planifolia HOM05D005351 ORTHO05D006542 1.2e-22 111.7 158 43.7
arahy.Tifrunner.gnm1.ann1.LDHF9L Arachis hypogaea HOM05D005351 ORTHO05D006542 9.8e-20 102.1 81 61.7
FvH4_3g42241 Fragaria vesca HOM05D005351 ORTHO05D006542 4.8e-19 99.8 189 39.7
Dinv10361 Davidia involucrata HOM05D005351 ORTHO05D006542 6.6e-16 89.4 73 53.4
Dinv10362 Davidia involucrata HOM05D005351 ORTHO05D006542 3.6e-14 83.6 145 46.9
AagrBONN_evm.TU.Sc2ySwM_368.1723 Anthoceros agrestis HOM05D005351 ORTHO05D006542 1.4e-13 81.6 130 47.7
Oeu047440.1 Olea europaea HOM05D011671 ORTHO05D000646 2.3e-13 80.9 106 46.2
MELO3C024969.2 Cucumis melo HOM05D005351 ORTHO05D006542 1.2e-12 78.6 59 74.6
Cre09.g388430 Chlamydomonas reinhardtii HOM05D005351 ORTHO05D006542 1.6e-09 68.2 187 31.0
Oeu053949.1 Olea europaea HOM05D011671 ORTHO05D013298 3.6e-06 57.0 70 47.1


User provided reference genes

Program Settings