Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017953.1 Olea europaea HOM05D004060 ORTHO05D004967 6.4e-103 377.9 259 100.0
Oeu064312.1 Olea europaea HOM05D004060 ORTHO05D004967 8.7e-84 314.3 264 79.5
MBI02_g05658_MAGBIO Magnolia biondii HOM05D004060 ORTHO05D004967 8.2e-42 174.9 270 51.9
Cpa.g.sc92.28 Carica papaya HOM05D004060 ORTHO05D004967 1.3e-39 167.5 275 49.5
Haze_19884 Corylus avellana HOM05D004060 ORTHO05D004967 5.0e-39 165.6 272 51.8
Haze_19892 Corylus avellana HOM05D004060 ORTHO05D004967 1.1e-38 164.5 272 51.8
Duzib128G1686 Durio zibethinus HOM05D004060 ORTHO05D004967 1.1e-38 164.5 281 52.7
Dinv02133 Davidia involucrata HOM05D004060 ORTHO05D004967 1.9e-38 163.7 274 53.6
Dinv18064 Davidia involucrata HOM05D004060 ORTHO05D004967 2.5e-38 163.3 263 53.6
Oeu033785.1 Olea europaea HOM05D004060 ORTHO05D004967 4.2e-38 162.5 278 53.2
Duzib093G0278 Durio zibethinus HOM05D004060 ORTHO05D004967 7.2e-38 161.8 213 49.3
PGR004G1680 Punica granatum HOM05D004060 ORTHO05D004967 2.1e-37 160.2 273 54.6
Phvul.001G135500 Phaseolus vulgaris HOM05D004060 ORTHO05D004967 3.6e-37 159.5 207 51.2
Lju124C36T16 Lonicera japonica HOM05D004060 ORTHO05D004967 4.7e-37 159.1 304 43.1
Cfa016842 Carpinus fangiana HOM05D004060 ORTHO05D004967 6.1e-37 158.7 275 53.1
Cc06_g16910 Coffea canephora HOM05D004060 ORTHO05D004967 1.8e-36 157.1 270 51.1
Hma1.2p1_0696F.1_g204640 Hydrangea macrophylla HOM05D004060 ORTHO05D004967 1.1e-35 154.5 278 51.1
QL07p021067 Quercus lobata HOM05D004060 ORTHO05D004967 2.0e-35 153.7 276 51.4
Nn2g15346 Nelumbo nucifera HOM05D004060 ORTHO05D004967 4.4e-35 152.5 206 48.1
TAR369G1158 Trochodendron aralioides HOM05D004060 ORTHO05D004967 4.4e-35 152.5 274 51.5
SGA_v2.0_scaffold69G23102 Striga asiatica HOM05D004060 ORTHO05D004967 9.7e-35 151.4 294 45.2
Dinv02134 Davidia involucrata HOM05D004060 ORTHO05D004967 6.3e-34 148.7 264 51.9
MBI04_g36073_MAGBIO Magnolia biondii HOM05D004060 ORTHO05D004967 2.4e-33 146.7 258 39.1
Prupe.7G064800 Prunus persica HOM05D004060 ORTHO05D004967 7.0e-33 145.2 291 50.2
TAR057G0003 Trochodendron aralioides HOM05D004060 ORTHO05D004967 1.6e-32 144.1 275 50.9
Actinidia24529 Actinidia chinensis HOM05D004060 ORTHO05D004967 2.6e-32 143.3 222 45.0
FAN05G0004 Fragaria x ananassa HOM05D004060 ORTHO05D004967 4.5e-32 142.5 294 48.0
TWI74G0684 Tripterygium wilfordii HOM05D004060 ORTHO05D004967 4.5e-32 142.5 255 51.4
FAN02G3665 Fragaria x ananassa HOM05D004060 ORTHO05D004967 5.9e-32 142.1 294 48.0
FAN09G1680 Fragaria x ananassa HOM05D004060 ORTHO05D004967 5.9e-32 142.1 294 48.0
Lsat_1_v5_gn_5_162320 Lactuca sativa HOM05D004060 ORTHO05D004967 5.9e-32 142.1 271 50.2
Medtr1g052560 Medicago truncatula HOM05D004060 ORTHO05D004967 5.9e-32 142.1 280 50.7
Peaxi162Scf00493g00316 Petunia axillaris HOM05D004060 ORTHO05D004967 7.7e-32 141.7 210 47.1
Potri.016G054400 Populus trichocarpa HOM05D004060 ORTHO05D004967 1.3e-31 141.0 280 48.9
CSS0022151 Camellia sinensis var. sinensis HOM05D004060 ORTHO05D004967 6.5e-31 138.7 284 48.6
Glyma.03G138100 Glycine max HOM05D004060 ORTHO05D004967 6.5e-31 138.7 216 50.9
Nn7g36226 Nelumbo nucifera HOM05D004060 ORTHO05D004967 1.1e-30 137.9 196 46.4
VMungo1383G2713 Vigna mungo HOM05D004060 ORTHO05D004967 1.1e-30 137.9 272 51.1
Ciclev10005594m.g Citrus clementina HOM05D004060 ORTHO05D004967 1.5e-30 137.5 281 51.2
ECA248G2911 Erigeron canadensis HOM05D004060 ORTHO05D004967 1.5e-30 137.5 282 48.6
RcHm_v2.0_Chr3g0481501 Rosa chinensis HOM05D004060 ORTHO05D004967 1.9e-30 137.1 294 47.3
FvH4_6g23510 Fragaria vesca HOM05D004060 ORTHO05D004967 4.2e-30 136.0 292 50.0
FAN14G3078 Fragaria x ananassa HOM05D004060 ORTHO05D004967 4.2e-30 136.0 292 50.0
Thecc.05G159200 Theobroma cacao HOM05D004060 ORTHO05D004967 5.5e-30 135.6 258 50.4
TWI53G1485 Tripterygium wilfordii HOM05D004060 ORTHO05D004967 9.4e-30 134.8 260 50.8
CARHR136960 Cardamine hirsuta HOM05D004060 ORTHO05D004967 2.1e-29 133.7 249 48.2
C04p03110 Brassica napus HOM05D004060 ORTHO05D004967 3.6e-29 132.9 261 45.2
BolC4t21952H Brassica oleracea HOM05D004060 ORTHO05D004967 3.6e-29 132.9 261 45.2
Nitab4.5_0001509g0060 Nicotiana tabacum HOM05D004060 ORTHO05D004967 8.0e-29 131.7 295 51.2
Nitab4.5_0002841g0040 Nicotiana tabacum HOM05D004060 ORTHO05D004967 1.4e-28 131.0 293 51.2
MSTRG.6438 Avicennia marina HOM05D004060 ORTHO05D004967 1.8e-28 130.6 291 48.1
Ca_08471_v3 Cicer arietinum L. HOM05D004060 ORTHO05D004967 2.3e-28 130.2 204 48.5
Actinidia09345 Actinidia chinensis HOM05D004060 ORTHO05D004967 3.0e-28 129.8 278 47.1
vmacro22363 Vaccinium macrocarpon HOM05D004060 ORTHO05D004967 6.8e-28 128.6 283 49.1
MSTRG.19874 Avicennia marina HOM05D004060 ORTHO05D004967 8.8e-28 128.3 288 45.8
ClCG10G016620 Citrullus lanatus HOM05D004060 ORTHO05D004967 8.8e-28 128.3 273 46.5
TPR.G21399 Trifolium pratense HOM05D004060 ORTHO05D004967 8.8e-28 128.3 281 48.4
MSTRG.10823 Avicennia marina HOM05D004060 ORTHO05D004967 2.0e-27 127.1 206 50.0
Duzib106G1229 Durio zibethinus HOM05D004060 ORTHO05D004967 4.4e-27 125.9 272 47.8
PGSC0003DMG400023721 Solanum tuberosum HOM05D004060 ORTHO05D004967 4.4e-27 125.9 298 48.3
Potri.006G053200 Populus trichocarpa HOM05D004060 ORTHO05D004967 5.7e-27 125.6 279 47.0
MELO3C009714.2 Cucumis melo HOM05D004060 ORTHO05D004967 1.7e-26 124.0 271 46.1
Nitab4.5_0001663g0020 Nicotiana tabacum HOM05D004060 ORTHO05D004967 1.7e-26 124.0 311 45.7
Eucgr.A02379 Eucalyptus grandis HOM05D004060 ORTHO05D004967 2.2e-26 123.6 239 52.7
Gohir.A11G312000 Gossypium hirsutum HOM05D004060 ORTHO05D004967 2.2e-26 123.6 265 49.1
DCAR_013590 Daucus carota HOM05D004060 ORTHO05D004967 2.8e-26 123.2 282 46.8
FAN05G5649 Fragaria x ananassa HOM05D004060 ORTHO05D004967 2.8e-26 123.2 274 46.4
COL.COLO4_28207 Corchorus olitorius HOM05D004060 ORTHO05D004967 3.7e-26 122.9 291 47.4
Medtr7g091990 Medicago truncatula HOM05D004060 ORTHO05D004967 3.7e-26 122.9 282 50.7
PSO384G1698 Papaver somniferum HOM05D004060 ORTHO05D004967 3.7e-26 122.9 250 44.0
arahy.Tifrunner.gnm1.ann1.L89JBM Arachis hypogaea HOM05D004060 ORTHO05D004967 4.8e-26 122.5 289 45.7
HPP92_019624 Vanilla planifolia HOM05D004060 ORTHO05D004967 4.8e-26 122.5 188 44.1
HanXRQChr10g0300071 Helianthus annuus HOM05D004060 ORTHO05D004967 6.3e-26 122.1 254 51.2
SalBow6G3128 Salvia bowleyana HOM05D004060 ORTHO05D004967 1.1e-25 121.3 264 49.2
CiPaw.10G032000 Carya illinoinensis HOM05D004060 ORTHO05D004967 1.4e-25 120.9 290 46.6
Nitab4.5_0000733g0190 Nicotiana tabacum HOM05D004060 ORTHO05D004967 1.4e-25 120.9 306 45.1
CsaV3_3G039720 Cucumis sativus L. HOM05D004060 ORTHO05D004967 1.8e-25 120.6 270 46.7
Sabra06G0037600 Salix brachista HOM05D004060 ORTHO05D004967 1.8e-25 120.6 263 47.9
TAR633G1984 Trochodendron aralioides HOM05D004060 ORTHO05D004967 3.1e-25 119.8 268 47.4
MD14G1069500 Malus domestica HOM05D004060 ORTHO05D004967 4.1e-25 119.4 288 46.2
PSO339G1536 Papaver somniferum HOM05D004060 ORTHO05D004967 4.1e-25 119.4 311 46.9
TWI77G1037 Tripterygium wilfordii HOM05D004060 ORTHO05D004967 4.1e-25 119.4 246 49.2
Glyma.19G141100 Glycine max HOM05D004060 ORTHO05D004967 5.3e-25 119.0 276 51.4
Manes.09G024700 Manihot esculenta HOM05D004060 ORTHO05D004967 7.0e-25 118.6 264 50.0
Sopen10g030840 Solanum pennellii HOM05D004060 ORTHO05D004967 7.0e-25 118.6 276 47.5
Peaxi162Scf01287g00012 Petunia axillaris HOM05D004060 ORTHO05D004967 9.1e-25 118.2 239 52.7
Migut.J01771 Erythranthe guttata HOM05D004060 ORTHO05D004967 1.2e-24 117.9 287 48.1
Gohir.A11G312100 Gossypium hirsutum HOM05D004060 ORTHO05D004967 1.2e-24 117.9 262 48.9
Manes.08G049300 Manihot esculenta HOM05D004060 ORTHO05D004967 1.2e-24 117.9 280 45.4
Aqoxy1G00285 Aquilegia oxysepala HOM05D004060 ORTHO05D004967 1.6e-24 117.5 274 44.5
Solyc04g015520.3 Solanum lycopersicum HOM05D004060 ORTHO05D004967 2.0e-24 117.1 307 45.3
HanXRQChr01g0008631 Helianthus annuus HOM05D004060 ORTHO05D004967 2.7e-24 116.7 249 50.2
Psat3g079320 Pisum sativum HOM05D004060 ORTHO05D004967 2.7e-24 116.7 285 48.1
Gohir.D11G328600 Gossypium hirsutum HOM05D004060 ORTHO05D004967 3.5e-24 116.3 262 48.1
Gorai.007G359900 Gossypium raimondii HOM05D004060 ORTHO05D004967 3.5e-24 116.3 262 48.1
CAN.G128.15 Capsicum annuum HOM05D004060 ORTHO05D004967 5.9e-24 115.5 257 47.9
HanXRQChr10g0300061 Helianthus annuus HOM05D004060 ORTHO05D004967 7.7e-24 115.2 240 42.5
ECA247G3737 Erigeron canadensis HOM05D003799 ORTHO05D001964 1.0e-23 114.8 131 61.8
Lsat_1_v5_gn_9_27220 Lactuca sativa HOM05D004060 ORTHO05D004967 1.7e-23 114.0 261 41.4
Rhsim03G0018200 Rhododendron simsii HOM05D004060 ORTHO05D004967 2.2e-23 113.6 278 45.3
Sed0004660 Sechium edule HOM05D004060 ORTHO05D004967 5.0e-23 112.5 281 47.3
ECA247G2970 Erigeron canadensis HOM05D004060 ORTHO05D004967 6.5e-23 112.1 131 61.1
Zm00001eb107230 Zea mays HOM05D004060 ORTHO05D004967 8.5e-23 111.7 290 41.7
PGSC0003DMG400027238 Solanum tuberosum HOM05D004060 ORTHO05D004967 1.1e-22 111.3 318 49.1
CANSAT80G2886 Cannabis sativa HOM05D004060 ORTHO05D004967 1.9e-22 110.5 275 46.9
Sopen04g007590 Solanum pennellii HOM05D004060 ORTHO05D004967 1.9e-22 110.5 280 52.9
BcaNung07195 Brassica carinata HOM05D004060 ORTHO05D004967 2.5e-22 110.2 256 45.3
Atru.chr1.1058 Acer truncatum HOM05D004060 ORTHO05D004967 3.2e-22 109.8 197 46.2
Hma1.2p1_0247F.1_g101840 Hydrangea macrophylla HOM05D004060 ORTHO05D004967 3.2e-22 109.8 268 44.8
Lj2C380T14 Lonicera japonica HOM05D004060 ORTHO05D004967 5.5e-22 109.0 146 48.6
BraA05t19254Z Brassica rapa HOM05D004060 ORTHO05D004967 7.2e-22 108.6 261 45.2
Lalb_Chr25g0287361 Lupinus albus HOM05D004060 ORTHO05D004967 7.2e-22 108.6 280 45.0
A05p02610 Brassica napus HOM05D004060 ORTHO05D004967 9.4e-22 108.2 261 45.2
Ca_26888_v3 Cicer arietinum L. HOM05D004060 ORTHO05D004967 9.4e-22 108.2 296 50.3
Phvul.007G253600 Phaseolus vulgaris HOM05D004060 ORTHO05D004967 1.2e-21 107.8 292 45.5
TPR.G3730 Trifolium pratense HOM05D004060 ORTHO05D004967 1.2e-21 107.8 281 44.5
Hund24724 Selenicereus undatus HOM05D004060 ORTHO05D004967 3.6e-21 106.3 258 43.0
Lalb_Chr20g0110781 Lupinus albus HOM05D004060 ORTHO05D004967 1.4e-20 104.4 291 48.1
Solyc10g080230.2 Solanum lycopersicum HOM05D004060 ORTHO05D004967 1.4e-20 104.4 170 45.9
Zm00001eb061820 Zea mays HOM05D004060 ORTHO05D004967 1.4e-20 104.4 212 35.4
EL10Ac3g07036 Beta vulgaris HOM05D004060 ORTHO05D004967 3.0e-20 103.2 296 45.3
ATR0332G033 Amborella trichopoda HOM05D004060 ORTHO05D004967 1.5e-19 100.9 266 43.2
AL4G40200 Arabidopsis lyrata HOM05D004060 ORTHO05D004967 2.0e-19 100.5 276 42.4
arahy.Tifrunner.gnm1.ann1.AM9K84 Arachis hypogaea HOM05D004060 ORTHO05D004967 5.7e-19 99.0 284 50.7
CiPaw.09G036400 Carya illinoinensis HOM05D004060 ORTHO05D004967 7.5e-19 98.6 213 51.6
Thhalv10017761m.g Eutrema salsugineum HOM05D004060 ORTHO05D004967 1.7e-18 97.4 257 43.6
CARHR167760 Cardamine hirsuta HOM05D004060 ORTHO05D004967 2.8e-18 96.7 270 43.3
Lj1g0010539 Lotus japonicus HOM05D004060 ORTHO05D004967 2.8e-18 96.7 284 45.1
VMungo0720G0143 Vigna mungo HOM05D004060 ORTHO05D004967 3.7e-18 96.3 296 47.0
AT2G41870 Arabidopsis thaliana HOM05D004060 ORTHO05D004967 6.3e-18 95.5 271 43.5
BcaB02g07595 Brassica carinata HOM05D004060 ORTHO05D004967 8.3e-18 95.1 248 48.4
BcaC07g40371 Brassica carinata HOM05D004060 ORTHO05D004967 8.3e-18 95.1 278 44.2
C08p33070 Brassica napus HOM05D004060 ORTHO05D004967 8.3e-18 95.1 278 44.2
BolC8t50907H Brassica oleracea HOM05D004060 ORTHO05D004967 8.3e-18 95.1 278 44.2
SalBow1G5147 Salvia bowleyana HOM05D004060 ORTHO05D004967 8.3e-18 95.1 261 44.4
Sp4g24140 Schrenkiella parvula HOM05D004060 ORTHO05D004967 1.4e-17 94.4 180 40.0
arahy.Tifrunner.gnm1.ann1.N3K66E Arachis hypogaea HOM05D003004 ORTHO05D004967 3.1e-17 93.2 57 82.5
Carub.0004s2418 Capsella rubella HOM05D004060 ORTHO05D004967 4.1e-17 92.8 278 40.3
CAN.G676.50 Capsicum annuum HOM05D004060 ORTHO05D004967 7.0e-17 92.0 253 50.2
A09p50400 Brassica napus HOM05D004060 ORTHO05D004967 1.6e-16 90.9 276 42.8
Aa31LG10G12370 Aethionema arabicum HOM05D004060 ORTHO05D004967 2.7e-16 90.1 266 43.2
Sc13g0001870 Simmondsia chinensis HOM05D004060 ORTHO05D004967 4.5e-16 89.4 184 45.7
Sp5g05050 Schrenkiella parvula HOM05D004060 ORTHO05D004967 5.9e-16 89.0 275 41.1
BraA09t40492Z Brassica rapa HOM05D004060 ORTHO05D004967 7.7e-16 88.6 276 44.9
THA.LOC104824453 Tarenaya hassleriana HOM05D004060 ORTHO05D004967 7.7e-16 88.6 276 46.7
AL5G39120 Arabidopsis lyrata HOM05D004060 ORTHO05D004967 1.0e-15 88.2 280 41.4
Os03g0808300 Oryza sativa ssp. japonica HOM05D004060 ORTHO05D004967 1.0e-15 88.2 282 39.7
AT3G57540 Arabidopsis thaliana HOM05D004060 ORTHO05D004967 1.7e-15 87.4 280 40.7
BcaC07g40387 Brassica carinata HOM05D004060 ORTHO05D004967 5.0e-15 85.9 275 45.1
Os07g0208600 Oryza sativa ssp. japonica HOM05D004060 ORTHO05D004967 8.6e-15 85.1 252 42.9
Carub.0005s2438 Capsella rubella HOM05D004060 ORTHO05D004967 1.9e-14 84.0 271 41.0
Thhalv10006130m.g Eutrema salsugineum HOM05D004060 ORTHO05D004967 1.9e-14 84.0 259 45.6
arahy.Tifrunner.gnm1.ann1.GL61MB Arachis hypogaea HOM05D004060 ORTHO05D004967 5.5e-14 82.4 249 50.6
DCAR_020477 Daucus carota HOM05D004060 ORTHO05D004967 1.2e-13 81.3 179 36.9
arahy.Tifrunner.gnm1.ann1.3TR3AL Arachis hypogaea HOM05D002100 ORTHO05D002310 3.6e-13 79.7 57 71.9
Ca_29692_v3 Cicer arietinum L. HOM05D004060 ORTHO05D004967 3.6e-13 79.7 157 55.4
Glyma.02G182600 Glycine max HOM05D004060 ORTHO05D004967 3.6e-13 79.7 302 45.4
Os07g0569100 Oryza sativa ssp. japonica HOM05D004060 ORTHO05D004967 8.0e-13 78.6 266 39.8
MD12G1072300 Malus domestica HOM05D004060 ORTHO05D004967 1.0e-12 78.2 323 36.2
Oeu056892.1 Olea europaea HOM05D004060 ORTHO05D004967 1.8e-12 77.4 84 56.0
HanXRQChr05g0132091 Helianthus annuus HOM05D004060 ORTHO05D004967 3.4e-11 73.2 254 40.2
Zm00001eb324720 Zea mays HOM05D004060 ORTHO05D004967 2.2e-10 70.5 190 35.8
Glyma.10G099400 Glycine max HOM05D004060 ORTHO05D004967 3.2e-09 66.6 301 43.2
unitig_8.g4575 Utricularia gibba HOM05D004060 ORTHO05D004967 5.4e-09 65.9 259 38.6
arahy.Tifrunner.gnm1.ann1.49FMRE Arachis hypogaea HOM05D004060 ORTHO05D004967 7.0e-09 65.5 226 36.7
ECA236G0930 Erigeron canadensis HOM05D004060 ORTHO05D001964 1.0e-07 61.6 142 53.5


User provided reference genes

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