Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017941.1 Olea europaea HOM05D007273 ORTHO05D009230 3.1e-150 535.0 258 100.0
MSTRG.6428 Avicennia marina HOM05D007273 ORTHO05D009230 2.6e-96 355.9 251 67.7
SalBow6G5536 Salvia bowleyana HOM05D007273 ORTHO05D009230 2.2e-95 352.8 254 66.5
Migut.J01756 Erythranthe guttata HOM05D007273 ORTHO05D009230 5.4e-94 348.2 246 69.1
Cc06_g17580 Coffea canephora HOM05D007273 ORTHO05D009230 1.5e-91 340.1 247 65.6
SGA_v2.0_scaffold69G23119 Striga asiatica HOM05D007273 ORTHO05D009230 1.1e-89 334.0 254 66.5
Actinidia39224 Actinidia chinensis HOM05D007273 ORTHO05D009230 3.1e-89 332.4 255 61.6
Dinv12487 Davidia involucrata HOM05D007273 ORTHO05D009230 4.4e-88 328.6 236 65.3
Rhsim03G0024900 Rhododendron simsii HOM05D007273 ORTHO05D009230 1.3e-87 327.0 232 65.1
vmacro07848 Vaccinium macrocarpon HOM05D007273 ORTHO05D009230 8.4e-87 324.3 232 64.2
Nn2g15217 Nelumbo nucifera HOM05D007273 ORTHO05D009230 1.7e-84 316.6 237 65.4
Peaxi162Scf00002g02715 Petunia axillaris HOM05D007273 ORTHO05D009230 2.5e-83 312.8 230 64.8
Solyc02g087600.3 Solanum lycopersicum HOM05D007273 ORTHO05D009230 2.1e-82 309.7 250 60.0
PGSC0003DMG401001308 Solanum tuberosum HOM05D007273 ORTHO05D009230 2.8e-82 309.3 250 60.0
Sopen02g032350 Solanum pennellii HOM05D007273 ORTHO05D009230 1.1e-81 307.4 250 60.0
Lsat_1_v5_gn_9_29100 Lactuca sativa HOM05D007273 ORTHO05D009230 2.4e-81 306.2 243 61.7
Nitab4.5_0000082g0140 Nicotiana tabacum HOM05D007273 ORTHO05D009230 2.4e-81 306.2 253 58.1
AUR62024452 Chenopodium quinoa HOM05D007273 ORTHO05D009230 1.5e-80 303.5 248 58.1
AUR62026041 Chenopodium quinoa HOM05D007273 ORTHO05D009230 2.0e-80 303.1 249 57.8
CAN.G417.4 Capsicum annuum HOM05D007273 ORTHO05D009230 5.8e-80 301.6 254 60.2
EL10Ac3g07092 Beta vulgaris HOM05D007273 ORTHO05D009230 4.9e-79 298.5 233 59.7
ECA247G0394 Erigeron canadensis HOM05D007273 ORTHO05D009230 7.1e-78 294.7 232 61.6
DCAR_003245 Daucus carota HOM05D007273 ORTHO05D009230 2.3e-76 289.7 233 60.9
TAR369G0984 Trochodendron aralioides HOM05D007273 ORTHO05D009230 3.0e-76 289.3 241 58.9
Rhsim03G0024700 Rhododendron simsii HOM05D007273 ORTHO05D009230 9.6e-75 284.3 278 51.1
Aqoxy1G00330 Aquilegia oxysepala HOM05D007273 ORTHO05D009230 1.6e-74 283.5 232 59.9
Sc25g0005300 Simmondsia chinensis HOM05D007273 ORTHO05D009230 2.4e-73 279.6 245 55.1
HanXRQChr05g0128781 Helianthus annuus HOM05D007273 ORTHO05D009230 7.6e-72 274.6 230 60.4
PSO339G1789 Papaver somniferum HOM05D007273 ORTHO05D009230 1.4e-70 270.4 238 56.7
Nitab4.5_0010316g0010 Nicotiana tabacum HOM05D007273 ORTHO05D009230 5.4e-70 268.5 248 54.0
PSO384G4400 Papaver somniferum HOM05D007273 ORTHO05D009230 3.9e-68 262.3 239 54.8
Haze_19853 Corylus avellana HOM05D007273 ORTHO05D009230 1.2e-64 250.8 246 53.3
Psat3g072760 Pisum sativum HOM05D007273 ORTHO05D009230 8.4e-63 244.6 237 54.0
CANSAT80G0412 Cannabis sativa HOM05D007273 ORTHO05D009230 2.4e-62 243.0 254 51.6
CANSAT80G2704 Cannabis sativa HOM05D007273 ORTHO05D009230 2.4e-62 243.0 254 51.6
Cfa016813 Carpinus fangiana HOM05D007273 ORTHO05D009230 3.2e-62 242.7 245 52.7
Medtr7g091490 Medicago truncatula HOM05D007273 ORTHO05D009230 3.2e-62 242.7 237 54.0
Lj1g0021019 Lotus japonicus HOM05D007273 ORTHO05D009230 1.6e-61 240.4 255 52.5
Ca_08456_v3 Cicer arietinum L. HOM05D007273 ORTHO05D009230 2.7e-61 239.6 243 51.4
arahy.Tifrunner.gnm1.ann1.J7IQUN Arachis hypogaea HOM05D007273 ORTHO05D009230 1.8e-60 236.9 250 52.8
Eucgr.A02345 Eucalyptus grandis HOM05D007273 ORTHO05D009230 1.8e-60 236.9 244 50.0
RcHm_v2.0_Chr3g0482541 Rosa chinensis HOM05D007273 ORTHO05D009230 4.3e-59 232.3 254 50.8
Glyma.03G136600 Glycine max HOM05D007273 ORTHO05D009230 5.6e-59 231.9 255 50.2
Prupe.7G059600 Prunus persica HOM05D007273 ORTHO05D009230 7.4e-59 231.5 250 51.6
CiPaw.09G038500 Carya illinoinensis HOM05D007273 ORTHO05D009230 2.1e-58 229.9 249 49.8
Lalb_Chr01g0017311 Lupinus albus HOM05D007273 ORTHO05D009230 3.7e-58 229.2 243 51.9
TWI74G1215 Tripterygium wilfordii HOM05D007273 ORTHO05D009230 8.1e-58 228.0 244 48.0
VMungo1383G0084 Vigna mungo HOM05D007273 ORTHO05D009230 8.1e-58 228.0 235 53.2
FAN05G2271 Fragaria x ananassa HOM05D007273 ORTHO05D009230 1.1e-57 227.6 257 50.6
Phvul.001G131900 Phaseolus vulgaris HOM05D007273 ORTHO05D009230 4.0e-57 225.7 256 48.8
FvH4_6g23860 Fragaria vesca HOM05D007273 ORTHO05D009230 9.0e-57 224.6 257 50.2
MBI17_g14625_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 4.5e-56 222.2 265 46.8
QL07p000584 Quercus lobata HOM05D007273 ORTHO05D009230 4.5e-56 222.2 263 49.4
ClCG04G000150 Citrullus lanatus HOM05D007273 ORTHO05D009230 1.0e-55 221.1 234 50.9
CsaV3_4G011670 Cucumis sativus L. HOM05D007273 ORTHO05D009230 2.2e-55 219.9 232 50.9
SEGI_31103 Sequoiadendron giganteum HOM05D007273 ORTHO05D009230 2.9e-55 219.5 257 46.7
Manes.09G022200 Manihot esculenta HOM05D007273 ORTHO05D009230 7.1e-54 214.9 258 46.5
PGR004G1947 Punica granatum HOM05D007273 ORTHO05D009230 7.1e-54 214.9 243 49.4
HPP92_016047 Vanilla planifolia HOM05D007273 ORTHO05D009230 1.6e-53 213.8 269 45.4
COL.COLO4_28286 Corchorus olitorius HOM05D007273 ORTHO05D009230 2.1e-53 213.4 253 47.8
Sabra06G0036200 Salix brachista HOM05D007273 ORTHO05D009230 7.9e-53 211.5 258 45.7
Potri.006G051600 Populus trichocarpa HOM05D007273 ORTHO05D009230 2.3e-52 209.9 235 47.7
THA.LOC104802102 Tarenaya hassleriana HOM05D007273 ORTHO05D009230 2.3e-52 209.9 260 48.8
Carub.0004s2403 Capsella rubella HOM05D007273 ORTHO05D009230 5.1e-52 208.8 246 48.8
CARHR136850 Cardamine hirsuta HOM05D007273 ORTHO05D009230 6.7e-52 208.4 245 47.8
AL4G40060 Arabidopsis lyrata HOM05D007273 ORTHO05D009230 1.5e-51 207.2 241 48.1
Cpa.g.sc92.54 Carica papaya HOM05D007273 ORTHO05D009230 3.3e-51 206.1 233 48.9
Gorai.006G136300 Gossypium raimondii HOM05D007273 ORTHO05D009230 3.3e-51 206.1 255 48.2
Gohir.D09G118000 Gossypium hirsutum HOM05D007273 ORTHO05D009230 5.7e-51 205.3 255 48.2
Gohir.A09G121900 Gossypium hirsutum HOM05D007273 ORTHO05D009230 1.6e-50 203.8 238 48.7
Sed0019353 Sechium edule HOM05D007273 ORTHO05D009230 6.3e-50 201.8 258 44.2
C04p02970 Brassica napus HOM05D007273 ORTHO05D009230 1.1e-49 201.1 240 47.5
Sp4g24020 Schrenkiella parvula HOM05D007273 ORTHO05D009230 1.1e-49 201.1 247 45.3
Thecc.05G153100 Theobroma cacao HOM05D007273 ORTHO05D009230 1.4e-49 200.7 256 44.9
AT2G41750 Arabidopsis thaliana HOM05D007273 ORTHO05D009230 2.4e-49 199.9 260 45.8
BolC4t21937H Brassica oleracea HOM05D003650 ORTHO05D004213 9.0e-49 198.0 240 46.2
Thhalv10017127m.g Eutrema salsugineum HOM05D007273 ORTHO05D009230 9.0e-49 198.0 243 46.9
BcaNung02834 Brassica carinata HOM05D007273 ORTHO05D009230 4.5e-48 195.7 238 45.4
A05p02510 Brassica napus HOM05D007273 ORTHO05D009230 4.5e-48 195.7 240 46.2
BraA05t19244Z Brassica rapa HOM05D007273 ORTHO05D009230 4.5e-48 195.7 240 46.2
Os12g0142600 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 4.5e-48 195.7 252 44.4
Aa31LG1G23760 Aethionema arabicum HOM05D007273 ORTHO05D009230 1.3e-47 194.1 247 45.7
Os11g0145100 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 2.9e-47 193.0 252 44.8
Ciclev10033324m.g Citrus clementina HOM05D007273 ORTHO05D009230 6.5e-47 191.8 253 45.5
Hma1.2p1_1611F.1_g293550 Hydrangea macrophylla HOM05D007273 ORTHO05D009230 2.1e-45 186.8 162 56.2
Mapoly0023s0152 Marchantia polymorpha HOM05D007273 ORTHO05D009230 7.9e-45 184.9 293 39.6
Rhsim03G0024300 Rhododendron simsii HOM05D007273 ORTHO05D009230 2.2e-42 176.8 134 63.4
Rhsim03G0024400 Rhododendron simsii HOM05D007273 ORTHO05D009230 2.2e-42 176.8 134 63.4
Pp3c17_17160 Physcomitrium patens HOM05D007273 ORTHO05D009230 6.3e-42 175.3 293 37.9
MBI17_g36895_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 1.1e-41 174.5 161 53.4
Zm00001eb163370 Zea mays HOM05D007273 ORTHO05D009230 1.0e-39 167.9 238 44.1
Ah.04g151620 Amaranthus hybridus HOM05D007273 ORTHO05D009230 9.4e-38 161.4 244 40.2
ATR0626G250 Amborella trichopoda HOM05D007273 ORTHO05D009230 2.3e-36 156.8 336 32.1
unitig_8.g4551 Utricularia gibba HOM05D007273 ORTHO05D009230 3.0e-36 156.4 125 61.6
SMO240G0020 Selaginella moellendorffii HOM05D007273 ORTHO05D009230 2.2e-34 150.2 194 46.4
FAN09G1358 Fragaria x ananassa HOM05D007273 ORTHO05D009230 7.7e-32 141.7 171 49.7
Lju124C41T6 Lonicera japonica HOM05D007273 ORTHO05D009230 5.0e-31 139.0 92 70.7
CSS0001142 Camellia sinensis var. sinensis HOM05D007273 ORTHO05D009230 8.5e-31 138.3 98 63.3
FAN02G1642 Fragaria x ananassa HOM05D007273 ORTHO05D009230 1.1e-25 121.3 164 43.9
Glyma.19G139000 Glycine max HOM05D007273 ORTHO05D009230 5.0e-23 112.5 99 56.6
Rhsim03G0023900 Rhododendron simsii HOM05D007273 ORTHO05D009230 4.2e-22 109.4 134 44.0
AagrBONN_evm.TU.Sc2ySwM_228.793 Anthoceros agrestis HOM05D007273 ORTHO05D009230 3.0e-20 103.2 190 34.2
MCO07G627 Micromonas commoda HOM05D007273 ORTHO05D009230 1.6e-16 90.9 261 28.7
Actinidia09327 Actinidia chinensis HOM05D007273 ORTHO05D009230 5.0e-15 85.9 139 38.1
Pp3c4_4830 Physcomitrium patens HOM05D007003 ORTHO05D008499 9.1e-09 65.1 285 22.8
TPR.G3731 Trifolium pratense HOM05D007273 ORTHO05D009230 1.6e-08 64.3 50 64.0
SGA_v2.0_scaffold105G30406 Striga asiatica HOM05D007273 ORTHO05D009230 3.5e-08 63.2 57 54.4
SMO339G0013 Selaginella moellendorffii HOM05D007003 ORTHO05D008499 7.2e-06 55.5 262 22.5


User provided reference genes

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