Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017923.1 Olea europaea HOM05D000620 ORTHO05D009085 4.8e-105 384.4 184 100.0
Oeu016937.1 Olea europaea HOM05D000620 ORTHO05D009085 1.6e-92 342.8 184 87.5
MSTRG.16073 Avicennia marina HOM05D000620 ORTHO05D009085 2.3e-78 295.8 186 75.8
Dinv14847 Davidia involucrata HOM05D000620 ORTHO05D009085 4.0e-75 285.0 186 71.0
CSS0017643 Camellia sinensis var. sinensis HOM05D000620 ORTHO05D009085 7.1e-72 274.2 189 68.8
GSVIVG01007063001 Vitis vinifera HOM05D000620 ORTHO05D009085 7.1e-72 274.2 188 67.0
MSTRG.14582 Avicennia marina HOM05D000620 ORTHO05D009085 7.8e-71 270.8 183 69.9
CiPaw.10G084700 Carya illinoinensis HOM05D000620 ORTHO05D009085 7.8e-71 270.8 187 67.9
Sabra16G0007500 Salix brachista HOM05D000620 ORTHO05D009085 7.8e-71 270.8 192 67.2
Atru.chr1.2211 Acer truncatum HOM05D000620 ORTHO05D009085 5.1e-70 268.1 192 66.7
Cfa000001 Carpinus fangiana HOM05D000620 ORTHO05D009085 5.1e-70 268.1 186 68.3
Thecc.06G244100 Theobroma cacao HOM05D000620 ORTHO05D009085 6.6e-70 267.7 187 66.3
Hma1.2p1_0394F.1_g143440 Hydrangea macrophylla HOM05D000620 ORTHO05D009085 1.1e-69 266.9 188 68.1
Haze_07056 Corylus avellana HOM05D000620 ORTHO05D009085 1.9e-69 266.2 186 68.3
vmacro03587 Vaccinium macrocarpon HOM05D000620 ORTHO05D009085 2.5e-69 265.8 185 69.2
Rhsim13G0138200 Rhododendron simsii HOM05D000015 ORTHO05D000984 3.3e-69 265.4 185 68.6
Manes.08G015100 Manihot esculenta HOM05D000620 ORTHO05D009085 4.3e-69 265.0 191 67.0
Cc09_g00110 Coffea canephora HOM05D000620 ORTHO05D009085 5.6e-69 264.6 181 68.5
Potri.016G001300 Populus trichocarpa HOM05D000620 ORTHO05D009085 9.6e-69 263.8 192 64.6
QL05p066232 Quercus lobata HOM05D000620 ORTHO05D009085 1.2e-68 263.5 186 67.7
Ciclev10014880m.g Citrus clementina HOM05D000620 ORTHO05D009085 1.6e-68 263.1 191 64.9
Potri.006G000900 Populus trichocarpa HOM05D000620 ORTHO05D009085 1.6e-68 263.1 192 65.6
Gohir.A06G202700 Gossypium hirsutum HOM05D000620 ORTHO05D009085 2.8e-68 262.3 187 63.6
Gorai.010G247300 Gossypium raimondii HOM05D000620 ORTHO05D009085 3.6e-68 261.9 187 63.1
Duzib235G0486 Durio zibethinus HOM05D000620 ORTHO05D009085 8.1e-68 260.8 187 65.8
Nn1g07657 Nelumbo nucifera HOM05D000620 ORTHO05D009085 2.4e-67 259.2 188 69.1
Sabra06G0001100 Salix brachista HOM05D000620 ORTHO05D009085 5.2e-67 258.1 195 64.6
Eucgr.D00969 Eucalyptus grandis HOM05D000620 ORTHO05D009085 8.9e-67 257.3 188 64.4
Lj2P254T37 Lonicera japonica HOM05D000620 ORTHO05D009085 2.0e-66 256.1 195 67.2
Gohir.D06G219000 Gossypium hirsutum HOM05D000620 ORTHO05D009085 2.6e-66 255.8 187 62.6
Actinidia01456 Actinidia chinensis HOM05D000620 ORTHO05D009085 4.4e-66 255.0 185 65.4
arahy.Tifrunner.gnm1.ann1.74W6LA Arachis hypogaea HOM05D000620 ORTHO05D009085 5.8e-66 254.6 193 66.8
VMungo0540G0948 Vigna mungo HOM05D000620 ORTHO05D009085 9.9e-66 253.8 199 66.3
Medtr2g027780 Medicago truncatula HOM05D000620 ORTHO05D009085 1.3e-65 253.4 204 63.7
Glyma.09G017200 Glycine max HOM05D000620 ORTHO05D009085 2.2e-65 252.7 195 66.7
Peaxi162Scf00563g00520 Petunia axillaris HOM05D000620 ORTHO05D009085 2.2e-65 252.7 185 63.8
PGR004G1712 Punica granatum HOM05D000620 ORTHO05D009085 3.8e-65 251.9 190 62.6
Cpa.g.sc27.188 Carica papaya HOM05D000620 ORTHO05D009085 4.9e-65 251.5 191 61.3
Lalb_Chr15g0088421 Lupinus albus HOM05D000620 ORTHO05D009085 8.4e-65 250.8 200 67.0
TPR.G10482 Trifolium pratense HOM05D000620 ORTHO05D009085 8.4e-65 250.8 205 63.4
Phvul.006G134900 Phaseolus vulgaris HOM05D000620 ORTHO05D009085 1.1e-64 250.4 201 65.2
Psat1g171440 Pisum sativum HOM05D000620 ORTHO05D009085 1.1e-64 250.4 205 62.4
Glyma.15G122900 Glycine max HOM05D000620 ORTHO05D009085 1.4e-64 250.0 199 65.3
arahy.Tifrunner.gnm1.ann1.NVEM8G Arachis hypogaea HOM05D000620 ORTHO05D009085 2.4e-64 249.2 194 65.5
Haze_04865 Corylus avellana HOM05D000620 ORTHO05D009085 2.4e-64 249.2 186 66.7
Sopen04g007360 Solanum pennellii HOM05D000620 ORTHO05D009085 3.2e-64 248.8 188 63.8
CAN.G1456.12 Capsicum annuum HOM05D000620 ORTHO05D009085 4.2e-64 248.4 184 63.0
Nitab4.5_0000147g0140 Nicotiana tabacum HOM05D000620 ORTHO05D009085 5.4e-64 248.1 185 62.7
Solyc04g015280.3 Solanum lycopersicum HOM05D000620 ORTHO05D009085 5.4e-64 248.1 188 63.3
Nitab4.5_0001663g0260 Nicotiana tabacum HOM05D000620 ORTHO05D009085 7.1e-64 247.7 185 62.2
TAR624G1286 Trochodendron aralioides HOM05D000620 ORTHO05D009085 9.3e-64 247.3 188 64.4
Ca_00781_v3 Cicer arietinum L. HOM05D000620 ORTHO05D009085 1.2e-63 246.9 204 62.7
Lj6g0026671 Lotus japonicus HOM05D000620 ORTHO05D009085 1.2e-63 246.9 202 64.4
PGSC0003DMG400027228 Solanum tuberosum HOM05D000620 ORTHO05D009085 2.1e-63 246.1 188 62.8
TWI63G1056 Tripterygium wilfordii HOM05D000620 ORTHO05D009085 4.6e-63 245.0 190 61.1
ECA233G5133 Erigeron canadensis HOM05D000620 ORTHO05D009085 1.7e-62 243.0 184 61.4
Nn1g08307 Nelumbo nucifera HOM05D000620 ORTHO05D009085 1.7e-62 243.0 185 64.3
PSO675G8183 Papaver somniferum HOM05D000620 ORTHO05D009085 1.7e-62 243.0 192 62.0
PSO541G0573 Papaver somniferum HOM05D000620 ORTHO05D009085 3.0e-62 242.3 192 61.5
Cfa005982 Carpinus fangiana HOM05D000620 ORTHO05D009085 3.9e-62 241.9 186 63.4
Lsat_1_v5_gn_4_64361 Lactuca sativa HOM05D000620 ORTHO05D009085 3.9e-62 241.9 193 60.6
Lalb_Chr18g0057541 Lupinus albus HOM05D000620 ORTHO05D009085 1.5e-61 240.0 206 62.6
DCAR_030823 Daucus carota HOM05D000620 ORTHO05D009085 4.8e-60 235.0 184 60.3
Glyma.07G270000 Glycine max HOM05D000620 ORTHO05D009085 6.2e-60 234.6 194 63.4
Prupe.4G001000 Prunus persica HOM05D000620 ORTHO05D009085 6.2e-60 234.6 200 61.0
FAN21G3339 Fragaria x ananassa HOM05D000620 ORTHO05D009085 1.8e-59 233.0 199 60.3
FAN25G3862 Fragaria x ananassa HOM05D000620 ORTHO05D009085 1.8e-59 233.0 199 60.3
FvH4_3g00090 Fragaria vesca HOM05D000620 ORTHO05D009085 2.6e-58 229.2 199 61.3
RcHm_v2.0_Chr5g0000121 Rosa chinensis HOM05D000620 ORTHO05D009085 4.4e-58 228.4 199 59.3
Migut.M01477 Erythranthe guttata HOM05D000620 ORTHO05D009085 5.8e-58 228.0 198 61.1
HanXRQChr17g0558261 Helianthus annuus HOM05D000620 ORTHO05D009085 1.3e-57 226.9 188 58.5
CiPaw.09G112700 Carya illinoinensis HOM05D000620 ORTHO05D009085 2.2e-57 226.1 186 61.3
CANSAT56G4351 Cannabis sativa HOM05D000620 ORTHO05D009085 8.4e-57 224.2 214 58.4
HanXRQChr16g0515261 Helianthus annuus HOM05D000620 ORTHO05D009085 5.4e-56 221.5 189 57.1
MBI15_g06333_MAGBIO Magnolia biondii HOM05D000620 ORTHO05D009085 6.0e-55 218.0 189 59.8
COL.COLO4_31965 Corchorus olitorius HOM05D000620 ORTHO05D009085 3.9e-54 215.3 184 57.6
Migut.H01638 Erythranthe guttata HOM05D000620 ORTHO05D009085 2.5e-53 212.6 184 57.6
MD05G1364100 Malus domestica HOM05D000620 ORTHO05D009085 4.3e-53 211.8 219 54.3
CDE06G1099 Ceratophyllum demersum HOM05D000620 ORTHO05D009085 3.6e-52 208.8 187 51.9
CDE03G0189 Ceratophyllum demersum HOM05D000620 ORTHO05D009085 6.9e-51 204.5 187 51.9
MBI15_g46854_MAGBIO Magnolia biondii HOM05D000620 ORTHO05D009085 6.9e-51 204.5 189 57.7
ClCG01G021040 Citrullus lanatus HOM05D000620 ORTHO05D009085 2.0e-50 203.0 203 53.7
MELO3C007990.2 Cucumis melo HOM05D000620 ORTHO05D009085 2.6e-50 202.6 203 52.7
Os09g0298500 Oryza sativa ssp. japonica HOM05D000620 ORTHO05D009085 5.8e-50 201.4 188 55.9
CsaV3_6G048040 Cucumis sativus L. HOM05D000620 ORTHO05D009085 1.3e-49 200.3 204 52.5
unitig_26.g10046 Utricularia gibba HOM05D000620 ORTHO05D009085 1.2e-47 193.7 189 51.9
Zm00001eb309310 Zea mays HOM05D000620 ORTHO05D009085 3.5e-47 192.2 187 55.1
Sed0009761 Sechium edule HOM05D000620 ORTHO05D009085 2.3e-46 189.5 204 52.0
HPP92_026163 Vanilla planifolia HOM05D000620 ORTHO05D009085 2.5e-45 186.0 185 52.4
HPP92_020470 Vanilla planifolia HOM05D000620 ORTHO05D009085 4.3e-45 185.3 185 52.4
THA.LOC104798382 Tarenaya hassleriana HOM05D000620 ORTHO05D009085 4.8e-44 181.8 188 53.7
Ah.01g004000 Amaranthus hybridus HOM05D000620 ORTHO05D009085 1.1e-43 180.6 189 49.7
AUR62044469 Chenopodium quinoa HOM05D000620 ORTHO05D009085 1.1e-43 180.6 189 50.8
unitig_749.g13688 Utricularia gibba HOM05D000620 ORTHO05D009085 4.0e-43 178.7 184 46.2
Sc05g0004780 Simmondsia chinensis HOM05D000620 ORTHO05D009085 1.2e-42 177.2 191 52.4
Hund17996 Selenicereus undatus HOM05D000185 ORTHO05D000105 2.6e-42 176.0 190 52.1
Sed0025356 Sechium edule HOM05D000620 ORTHO05D009085 2.2e-41 172.9 204 47.5
Thhalv10000890m.g Eutrema salsugineum HOM05D000620 ORTHO05D009085 8.4e-41 171.0 184 46.7
BcaC06g31345 Brassica carinata HOM05D000620 ORTHO05D009085 1.9e-37 159.8 191 45.0
BolC7t43688H Brassica oleracea HOM05D000620 ORTHO05D009085 9.6e-37 157.5 191 44.5
A06p44750 Brassica napus HOM05D000620 ORTHO05D009085 1.3e-36 157.1 192 44.3
C07p31450 Brassica napus HOM05D000620 ORTHO05D009085 1.3e-36 157.1 191 44.5
unitig_92.g28104 Utricularia gibba HOM05D000620 ORTHO05D009085 4.1e-35 152.1 186 43.0
unitig_37.g12166 Utricularia gibba HOM05D000184 ORTHO05D000032 3.4e-34 149.1 188 43.1
ATR0751G207 Amborella trichopoda HOM05D000620 ORTHO05D009085 5.1e-30 135.2 204 38.2
SGA_v2.0_scaffold239G43985 Striga asiatica HOM05D000620 ORTHO05D009085 1.4e-24 117.1 181 41.4
Actinidia02272 Actinidia chinensis HOM05D000620 ORTHO05D009085 8.2e-12 74.7 52 63.5
PSO210G4590 Papaver somniferum HOM05D000620 ORTHO05D000537 6.7e-06 55.1 190 23.2


User provided reference genes

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