Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017912.1 Olea europaea HOM05D002383 ORTHO05D002515 5.2e-56 220.7 104 100.0
Oeu034180.1 Olea europaea HOM05D002383 ORTHO05D002515 4.0e-40 167.9 140 65.0
Oeu017911.1 Olea europaea HOM05D002383 ORTHO05D002515 2.0e-31 139.0 177 48.6
Oeu030979.1 Olea europaea HOM05D002383 ORTHO05D002515 3.5e-28 128.3 98 69.4
MSTRG.3147 Avicennia marina HOM05D002383 ORTHO05D002515 4.3e-18 94.7 107 50.5
SGA_v2.0_scaffold18G08279 Striga asiatica HOM05D002383 ORTHO05D002515 6.3e-17 90.9 105 54.3
Oeu018138.1 Olea europaea HOM05D002383 ORTHO05D002515 1.1e-16 90.1 92 54.3
Oeu054622.1 Olea europaea HOM05D002383 ORTHO05D002515 1.8e-16 89.4 91 57.1
Migut.H00078 Erythranthe guttata HOM05D002383 ORTHO05D002515 2.4e-16 89.0 101 50.5
CSS0011711 Camellia sinensis var. sinensis HOM05D002383 ORTHO05D002515 3.1e-16 88.6 103 51.5
Nn3g16740 Nelumbo nucifera HOM05D002383 ORTHO05D002515 1.5e-15 86.3 88 51.1
MSTRG.24037 Avicennia marina HOM05D002383 ORTHO05D002515 2.0e-15 85.9 104 50.0
SGA_v2.0_scaffold224G42989 Striga asiatica HOM05D002383 ORTHO05D002515 2.6e-15 85.5 103 50.5
Rhsim08G0050700 Rhododendron simsii HOM05D002383 ORTHO05D002515 4.5e-15 84.7 106 49.1
Nn4g22639 Nelumbo nucifera HOM05D002383 ORTHO05D002515 7.7e-15 84.0 90 52.2
SGA_v2.0_scaffold135G34905 Striga asiatica HOM05D002383 ORTHO05D002515 7.7e-15 84.0 105 47.6
Oeu036541.1 Olea europaea HOM05D002383 ORTHO05D002515 1.3e-14 83.2 102 49.0
Migut.K01394 Erythranthe guttata HOM05D002383 ORTHO05D002515 1.7e-14 82.8 108 48.1
Manes.15G150600 Manihot esculenta HOM05D002383 ORTHO05D002515 6.5e-14 80.9 105 44.8
SalBow7G3295 Salvia bowleyana HOM05D002383 ORTHO05D002515 6.5e-14 80.9 101 46.5
CAN.G1057.2 Capsicum annuum HOM05D002383 ORTHO05D002515 1.1e-13 80.1 102 45.1
Manes.17G112300 Manihot esculenta HOM05D002383 ORTHO05D002515 1.1e-13 80.1 106 45.3
SalBow1G3310 Salvia bowleyana HOM05D002383 ORTHO05D002515 1.1e-13 80.1 105 44.8
COL.COLO4_29113 Corchorus olitorius HOM05D002383 ORTHO05D002515 1.9e-13 79.3 105 45.7
TAR622G1076 Trochodendron aralioides HOM05D002383 ORTHO05D002515 1.9e-13 79.3 104 47.1
FAN05G3597 Fragaria x ananassa HOM05D002383 ORTHO05D002515 2.5e-13 79.0 109 46.8
FvH4_6g51230 Fragaria vesca HOM05D002383 ORTHO05D002515 3.2e-13 78.6 109 46.8
FAN02G4557 Fragaria x ananassa HOM05D002383 ORTHO05D002515 3.2e-13 78.6 109 46.8
FAN14G3744 Fragaria x ananassa HOM05D002383 ORTHO05D002515 3.2e-13 78.6 109 46.8
TAR374G1253 Trochodendron aralioides HOM05D002383 ORTHO05D002515 3.2e-13 78.6 101 45.5
Rhsim10G0017000 Rhododendron simsii HOM05D002383 ORTHO05D002515 5.5e-13 77.8 105 43.8
TWI12G0144 Tripterygium wilfordii HOM05D002383 ORTHO05D002515 7.2e-13 77.4 106 42.5
CSS0031549 Camellia sinensis var. sinensis HOM05D002383 ORTHO05D002515 1.2e-12 76.6 103 41.7
TAR629G2295 Trochodendron aralioides HOM05D002383 ORTHO05D002515 1.2e-12 76.6 104 44.2
Peaxi162Scf00080g00104 Petunia axillaris HOM05D002383 ORTHO05D002515 1.6e-12 76.3 101 46.5
Thecc.02G258100 Theobroma cacao HOM05D002383 ORTHO05D002515 1.6e-12 76.3 106 45.3
CSS0002762 Camellia sinensis var. sinensis HOM05D002383 ORTHO05D002515 2.1e-12 75.9 107 44.9
CDE07G1210 Ceratophyllum demersum HOM05D002383 ORTHO05D002515 2.1e-12 75.9 102 41.2
MD09G1027300 Malus domestica HOM05D002383 ORTHO05D002515 2.1e-12 75.9 108 43.5
Prupe.3G291500 Prunus persica HOM05D002383 ORTHO05D002515 2.1e-12 75.9 106 46.2
RcHm_v2.0_Chr2g0172811 Rosa chinensis HOM05D002383 ORTHO05D002515 2.7e-12 75.5 102 45.1
CiPaw.05G183200 Carya illinoinensis HOM05D002383 ORTHO05D002515 3.6e-12 75.1 94 45.7
MBI16_g23839_MAGBIO Magnolia biondii HOM05D002383 ORTHO05D002515 3.6e-12 75.1 109 39.4
Thecc.04G017100 Theobroma cacao HOM05D002383 ORTHO05D002515 6.1e-12 74.3 105 44.8
Atru.chr6.2391 Acer truncatum HOM05D002383 ORTHO05D002515 7.9e-12 73.9 109 44.0
CiPaw.06G068500 Carya illinoinensis HOM05D002383 ORTHO05D002515 7.9e-12 73.9 97 46.4
Gohir.A09G029100 Gossypium hirsutum HOM05D002383 ORTHO05D002515 7.9e-12 73.9 106 40.6
Gohir.D09G028600 Gossypium hirsutum HOM05D002383 ORTHO05D002515 7.9e-12 73.9 106 40.6
Gorai.006G033300 Gossypium raimondii HOM05D002383 ORTHO05D002515 7.9e-12 73.9 106 40.6
TWI36G1091 Tripterygium wilfordii HOM05D002383 ORTHO05D002515 7.9e-12 73.9 108 41.7
TWI56G1026 Tripterygium wilfordii HOM05D002383 ORTHO05D002515 7.9e-12 73.9 106 44.3
TAR371G1055 Trochodendron aralioides HOM05D002383 ORTHO05D002515 7.9e-12 73.9 103 46.6
Aqoxy3G01198 Aquilegia oxysepala HOM05D002383 ORTHO05D002515 1.0e-11 73.6 106 43.4
Sabra17G0061800 Salix brachista HOM05D002383 ORTHO05D002515 1.0e-11 73.6 105 41.9
DCAR_021721 Daucus carota HOM05D002383 ORTHO05D002515 1.4e-11 73.2 102 40.2
PGR142G2811 Punica granatum HOM05D002383 ORTHO05D002515 1.4e-11 73.2 105 45.7
Actinidia05994 Actinidia chinensis HOM05D002383 ORTHO05D002515 1.8e-11 72.8 88 45.5
Gohir.A03G136100 Gossypium hirsutum HOM05D002383 ORTHO05D002515 1.8e-11 72.8 110 40.9
Sp7g01460 Schrenkiella parvula HOM05D002383 ORTHO05D002515 2.3e-11 72.4 108 41.7
Duzib264G1049 Durio zibethinus HOM05D002383 ORTHO05D002515 3.0e-11 72.0 105 42.9
Haze_12239 Corylus avellana HOM05D002383 ORTHO05D002515 3.9e-11 71.6 95 43.2
Duzib251G0524 Durio zibethinus HOM05D002383 ORTHO05D002515 3.9e-11 71.6 110 41.8
Potri.017G070000 Populus trichocarpa HOM05D002383 ORTHO05D002515 3.9e-11 71.6 105 42.9
Solyc02g067810.1 Solanum lycopersicum HOM05D002383 ORTHO05D002515 3.9e-11 71.6 102 43.1
Hma1.2p1_2120F.1_g314410 Hydrangea macrophylla HOM05D002383 ORTHO05D002515 5.1e-11 71.2 107 43.9
MD17G1027200 Malus domestica HOM05D002383 ORTHO05D002515 5.1e-11 71.2 96 44.8
Aqoxy5G03793 Aquilegia oxysepala HOM05D002383 ORTHO05D002515 6.7e-11 70.9 108 44.4
Glyma.02G038200 Glycine max HOM05D002383 ORTHO05D002515 8.8e-11 70.5 102 39.2
PSO675G5790 Papaver somniferum HOM05D002383 ORTHO05D002515 8.8e-11 70.5 97 45.4
Gorai.005G179500 Gossypium raimondii HOM05D002383 ORTHO05D002515 1.1e-10 70.1 110 40.0
Eucgr.I01742 Eucalyptus grandis HOM05D002383 ORTHO05D002515 1.5e-10 69.7 94 50.0
BraA04t17007Z Brassica rapa HOM05D002383 ORTHO05D002515 2.5e-10 68.9 108 40.7
AT5G40460 Arabidopsis thaliana HOM05D002383 ORTHO05D002515 3.3e-10 68.6 116 41.4
Duzib248G0824 Durio zibethinus HOM05D002383 ORTHO05D002515 3.3e-10 68.6 101 42.6
Sopen02g016920 Solanum pennellii HOM05D002383 ORTHO05D002515 3.3e-10 68.6 102 42.2
Gohir.D02G159400 Gossypium hirsutum HOM05D002383 ORTHO05D002515 4.3e-10 68.2 110 39.1
Lsat_1_v5_gn_4_183900 Lactuca sativa HOM05D002383 ORTHO05D002515 4.3e-10 68.2 102 40.2
BcaB06g27511 Brassica carinata HOM05D002383 ORTHO05D002515 5.7e-10 67.8 108 40.7
Hma1.2p1_0160F.1_g071240 Hydrangea macrophylla HOM05D002383 ORTHO05D002515 5.7e-10 67.8 93 41.9
PGSC0003DMG400006915 Solanum tuberosum HOM05D002383 ORTHO05D002515 5.7e-10 67.8 102 41.2
TPR.G34660 Trifolium pratense HOM05D002383 ORTHO05D002515 5.7e-10 67.8 101 41.6
AL7G49370 Arabidopsis lyrata HOM05D002383 ORTHO05D002515 7.4e-10 67.4 114 38.6
Glyma.01G026600 Glycine max HOM05D002383 ORTHO05D002515 7.4e-10 67.4 104 40.4
Cfa007370 Carpinus fangiana HOM05D002383 ORTHO05D002515 9.7e-10 67.0 102 46.1
Cfa009202 Carpinus fangiana HOM05D002383 ORTHO05D002515 9.7e-10 67.0 97 42.3
Duzib187G0948 Durio zibethinus HOM05D002383 ORTHO05D002515 9.7e-10 67.0 104 41.3
Lj4g0012935 Lotus japonicus HOM05D002383 ORTHO05D002515 9.7e-10 67.0 94 40.4
A04p13490 Brassica napus HOM05D002383 ORTHO05D002515 1.3e-09 66.6 108 39.8
C04p47260 Brassica napus HOM05D002383 ORTHO05D002515 1.3e-09 66.6 108 39.8
BolC4t26325H Brassica oleracea HOM05D002383 ORTHO05D002515 1.3e-09 66.6 108 39.8
CSS0034273 Camellia sinensis var. sinensis HOM05D002383 ORTHO05D002515 1.3e-09 66.6 103 42.7
PSO782G0538 Papaver somniferum HOM05D002383 ORTHO05D002515 1.3e-09 66.6 108 42.6
Sopen02g031160 Solanum pennellii HOM05D002383 ORTHO05D002515 1.7e-09 66.2 106 42.5
PGSC0003DMG400012600 Solanum tuberosum HOM05D002383 ORTHO05D002515 1.7e-09 66.2 107 42.1
CANSAT64G1350 Cannabis sativa HOM05D002383 ORTHO05D002515 2.2e-09 65.9 122 41.0
CARHR261560 Cardamine hirsuta HOM05D002383 ORTHO05D002515 2.2e-09 65.9 113 41.6
Haze_14738 Corylus avellana HOM05D002383 ORTHO05D002515 2.8e-09 65.5 102 45.1
Sc03g0007450 Simmondsia chinensis HOM05D002383 ORTHO05D002515 2.8e-09 65.5 100 38.0
Solyc02g086450.1 Solanum lycopersicum HOM05D002383 ORTHO05D002515 2.8e-09 65.5 106 42.5
Duzib268G1316 Durio zibethinus HOM05D002383 ORTHO05D002515 4.8e-09 64.7 108 38.0
Lalb_Chr05g0216591 Lupinus albus HOM05D002383 ORTHO05D002515 4.8e-09 64.7 106 38.7
PSO478G4643 Papaver somniferum HOM05D002383 ORTHO05D002515 4.8e-09 64.7 108 41.7
vmacro01128 Vaccinium macrocarpon HOM05D005436 ORTHO05D006215 4.8e-09 64.7 99 40.4
Oeu056716.1 Olea europaea HOM05D002383 ORTHO05D002515 6.3e-09 64.3 80 40.0
PGR083G1142 Punica granatum HOM05D002383 ORTHO05D002515 6.3e-09 64.3 121 40.5
TWI18G1125 Tripterygium wilfordii HOM05D002383 ORTHO05D002515 6.3e-09 64.3 107 35.5
Nitab4.5_0008365g0010 Nicotiana tabacum HOM05D002383 ORTHO05D002515 8.2e-09 63.9 80 45.0
Aqoxy2G01151 Aquilegia oxysepala HOM05D002383 ORTHO05D002515 1.1e-08 63.5 108 42.6
HanXRQChr15g0475321 Helianthus annuus HOM05D002383 ORTHO05D002515 1.1e-08 63.5 102 38.2
PSO063G0306 Papaver somniferum HOM05D002383 ORTHO05D002515 1.1e-08 63.5 108 41.7
Hma1.2p1_0223F.1_g094100 Hydrangea macrophylla HOM05D002383 ORTHO05D002515 1.4e-08 63.2 99 43.4
Atru.chr11.2114 Acer truncatum HOM05D002383 ORTHO05D002515 1.8e-08 62.8 108 40.7
Atru.chr11.2129 Acer truncatum HOM05D002383 ORTHO05D002515 1.8e-08 62.8 108 40.7
Thhalv10028250m.g Eutrema salsugineum HOM05D002383 ORTHO05D002515 1.8e-08 62.8 110 38.2
Nitab4.5_0003318g0160 Nicotiana tabacum HOM05D002383 ORTHO05D002515 1.8e-08 62.8 102 40.2
AL1G21560 Arabidopsis lyrata HOM05D002383 ORTHO05D002515 2.4e-08 62.4 93 40.9
Nitab4.5_0005022g0010 Nicotiana tabacum HOM05D002383 ORTHO05D002515 2.4e-08 62.4 80 43.8
Lalb_Chr02g0160501 Lupinus albus HOM05D002383 ORTHO05D002515 3.1e-08 62.0 95 45.3
Oeu014151.1 Olea europaea HOM05D002383 ORTHO05D002515 3.1e-08 62.0 80 42.5
AL5G17050 Arabidopsis lyrata HOM05D002383 ORTHO05D002515 4.1e-08 61.6 108 38.9
AT1G10690 Arabidopsis thaliana HOM05D002383 ORTHO05D002515 4.1e-08 61.6 94 37.2
Cpa.g.sc130.83 Carica papaya HOM05D002383 ORTHO05D002515 4.1e-08 61.6 104 40.4
Lsat_1_v5_gn_0_39801 Lactuca sativa HOM05D002383 ORTHO05D002515 4.1e-08 61.6 105 39.0
Lalb_Chr06g0175741 Lupinus albus HOM05D002383 ORTHO05D002515 4.1e-08 61.6 96 38.5
Ciclev10017241m.g Citrus clementina HOM05D002383 ORTHO05D002515 5.3e-08 61.2 113 41.6
Aa31LG2G5040 Aethionema arabicum HOM05D002383 ORTHO05D002515 6.9e-08 60.8 114 39.5
Medtr8g069510 Medicago truncatula HOM05D002383 ORTHO05D002515 9.1e-08 60.5 114 38.6
AL2G15780 Arabidopsis lyrata HOM05D002383 ORTHO05D002515 1.2e-07 60.1 97 39.2
BolC9t53287H Brassica oleracea HOM05D002383 ORTHO05D002515 1.2e-07 60.1 113 37.2
MELO3C021579.2 Cucumis melo HOM05D002383 ORTHO05D002515 1.2e-07 60.1 104 43.3
Lj2g0006785 Lotus japonicus HOM05D002383 ORTHO05D002515 1.2e-07 60.1 109 42.2
Rhsim12G0112000 Rhododendron simsii HOM05D002383 ORTHO05D002515 1.2e-07 60.1 93 40.9
Aa31LG2G9800 Aethionema arabicum HOM05D002383 ORTHO05D002515 1.5e-07 59.7 98 34.7
Aa31LG9G1160 Aethionema arabicum HOM05D002383 ORTHO05D002515 1.5e-07 59.7 108 40.7
VMungo0251G0034 Vigna mungo HOM05D002383 ORTHO05D002515 1.5e-07 59.7 108 38.0
Carub.0007s3513 Capsella rubella HOM05D002383 ORTHO05D002515 2.0e-07 59.3 111 38.7
CAN.G473.10 Capsicum annuum HOM05D002383 ORTHO05D002515 2.0e-07 59.3 102 40.2
ClCG09G019250 Citrullus lanatus HOM05D002383 ORTHO05D002515 2.0e-07 59.3 104 42.3
MD13G1102700 Malus domestica HOM05D002383 ORTHO05D002515 2.0e-07 59.3 93 41.9
Prupe.1G243100 Prunus persica HOM05D002383 ORTHO05D002515 2.0e-07 59.3 98 37.8
THA.LOC104805371 Tarenaya hassleriana HOM05D002383 ORTHO05D002515 2.0e-07 59.3 115 36.5
THA.LOC104809580 Tarenaya hassleriana HOM05D002383 ORTHO05D002515 2.0e-07 59.3 104 37.5
MSTRG.570 Avicennia marina HOM05D002383 ORTHO05D002515 2.6e-07 58.9 104 37.5
CARHR010870 Cardamine hirsuta HOM05D002383 ORTHO05D002515 2.6e-07 58.9 98 37.8
Migut.E00196 Erythranthe guttata HOM05D002383 ORTHO05D002515 2.6e-07 58.9 113 37.2
Lalb_Chr09g0334821 Lupinus albus HOM05D002383 ORTHO05D002515 3.4e-07 58.5 110 38.2
Phvul.003G064100 Phaseolus vulgaris HOM05D002383 ORTHO05D002515 3.4e-07 58.5 97 37.1
Phvul.002G150700 Phaseolus vulgaris HOM05D002383 ORTHO05D002515 4.5e-07 58.2 108 35.2
BcaC06g33793 Brassica carinata HOM05D002383 ORTHO05D002515 5.9e-07 57.8 114 37.7
C07p36820 Brassica napus HOM05D002383 ORTHO05D002515 5.9e-07 57.8 114 37.7
BolC7t44195H Brassica oleracea HOM05D002383 ORTHO05D002515 5.9e-07 57.8 114 37.7
Psat4g115800 Pisum sativum HOM05D002383 ORTHO05D002515 5.9e-07 57.8 121 37.2
Carub.0001s1018 Capsella rubella HOM05D002383 ORTHO05D002515 7.7e-07 57.4 99 38.4
COL.COLO4_24249 Corchorus olitorius HOM05D002383 ORTHO05D002515 7.7e-07 57.4 114 38.6
Gohir.D12G149200 Gossypium hirsutum HOM05D002383 ORTHO05D002515 7.7e-07 57.4 103 40.8
Gorai.008G160700 Gossypium raimondii HOM05D002383 ORTHO05D002515 7.7e-07 57.4 103 40.8
Aa31LG2G5060 Aethionema arabicum HOM05D002383 ORTHO05D002515 1.0e-06 57.0 114 36.8
BcaC05g24959 Brassica carinata HOM05D002383 ORTHO05D002515 1.0e-06 57.0 92 35.9
CsaV3_5G027140 Cucumis sativus L. HOM05D002383 ORTHO05D002515 1.0e-06 57.0 104 41.3
Thhalv10009472m.g Eutrema salsugineum HOM05D002383 ORTHO05D002515 1.0e-06 57.0 93 37.6
BcaC04g23898 Brassica carinata HOM05D002383 ORTHO05D002515 1.3e-06 56.6 113 36.3
C09p03670 Brassica napus HOM05D002383 ORTHO05D002515 1.3e-06 56.6 113 36.3
CARHR051790 Cardamine hirsuta HOM05D002383 ORTHO05D002515 1.3e-06 56.6 99 37.4
Glyma.18G143300 Glycine max HOM05D002383 ORTHO05D002515 1.3e-06 56.6 92 37.0
Manes.13G025600 Manihot esculenta HOM05D002383 ORTHO05D002515 1.3e-06 56.6 89 34.8
Oeu001712.1 Olea europaea HOM05D002383 ORTHO05D002515 1.3e-06 56.6 84 40.5
A06p07510 Brassica napus HOM05D002383 ORTHO05D002515 1.7e-06 56.2 92 34.8
BraA06t23955Z Brassica rapa HOM05D002383 ORTHO05D002515 1.7e-06 56.2 92 34.8
Ca_04169_v3 Cicer arietinum L. HOM05D002383 ORTHO05D002515 2.2e-06 55.8 110 40.9
Gohir.A12G144600 Gossypium hirsutum HOM05D002383 ORTHO05D002515 2.2e-06 55.8 103 39.8
HanXRQChr14g0450551 Helianthus annuus HOM05D002383 ORTHO05D002515 2.2e-06 55.8 99 35.4
Manes.12G024000 Manihot esculenta HOM05D002383 ORTHO05D002515 2.2e-06 55.8 102 33.3
THA.LOC104825323 Tarenaya hassleriana HOM05D002383 ORTHO05D002515 2.2e-06 55.8 88 38.6
BraA06t27021Z Brassica rapa HOM05D002383 ORTHO05D002515 2.9e-06 55.5 95 36.8
BolC5t29651H Brassica oleracea HOM05D002383 ORTHO05D002515 5.0e-06 54.7 92 35.9
BcaC06g30972 Brassica carinata HOM05D002383 ORTHO05D002515 6.5e-06 54.3 105 36.2
MBI04_g36072_MAGBIO Magnolia biondii HOM05D003595 ORTHO05D004132 6.5e-06 54.3 60 43.3
Potri.008G187300 Populus trichocarpa HOM05D002383 ORTHO05D002515 6.5e-06 54.3 106 34.0
Potri.010G045200 Populus trichocarpa HOM05D002383 ORTHO05D002515 6.5e-06 54.3 108 37.0


User provided reference genes

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