Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017911.1 Olea europaea HOM05D002383 ORTHO05D002515 7.5e-44 181.0 170 100.0
Oeu034180.1 Olea europaea HOM05D002383 ORTHO05D002515 8.6e-32 141.0 170 66.5
Oeu017912.1 Olea europaea HOM05D002383 ORTHO05D002515 1.9e-31 139.8 177 48.6
Oeu030979.1 Olea europaea HOM05D002383 ORTHO05D002515 2.5e-23 112.8 73 69.9
MSTRG.3147 Avicennia marina HOM05D002383 ORTHO05D002515 4.8e-14 82.0 77 54.5
CSS0011711 Camellia sinensis var. sinensis HOM05D002383 ORTHO05D002515 2.4e-13 79.7 76 53.9
Oeu036541.1 Olea europaea HOM05D002383 ORTHO05D002515 3.1e-13 79.3 75 52.0
Nitab4.5_0005022g0010 Nicotiana tabacum HOM05D002383 ORTHO05D002515 6.9e-13 78.2 73 49.3
Nitab4.5_0008365g0010 Nicotiana tabacum HOM05D002383 ORTHO05D002515 6.9e-13 78.2 73 49.3
SGA_v2.0_scaffold18G08279 Striga asiatica HOM05D002383 ORTHO05D002515 9.0e-13 77.8 77 51.9
Oeu018138.1 Olea europaea HOM05D002383 ORTHO05D002515 2.0e-12 76.6 65 58.5
Oeu054622.1 Olea europaea HOM05D002383 ORTHO05D002515 5.8e-12 75.1 64 59.4
Rhsim08G0050700 Rhododendron simsii HOM05D002383 ORTHO05D002515 5.8e-12 75.1 79 46.8
SalBow1G3310 Salvia bowleyana HOM05D002383 ORTHO05D002515 5.8e-12 75.1 77 48.1
Nn4g22639 Nelumbo nucifera HOM05D002383 ORTHO05D002515 7.6e-12 74.7 63 57.1
TAR374G1253 Trochodendron aralioides HOM05D002383 ORTHO05D002515 7.6e-12 74.7 75 48.0
MSTRG.24037 Avicennia marina HOM05D002383 ORTHO05D002515 9.9e-12 74.3 77 49.4
FAN05G3597 Fragaria x ananassa HOM05D002383 ORTHO05D002515 2.2e-11 73.2 82 46.3
Manes.15G150600 Manihot esculenta HOM05D002383 ORTHO05D002515 2.2e-11 73.2 78 50.0
Migut.K01394 Erythranthe guttata HOM05D002383 ORTHO05D002515 2.9e-11 72.8 81 49.4
TWI12G0144 Tripterygium wilfordii HOM05D002383 ORTHO05D002515 2.9e-11 72.8 80 45.0
FvH4_6g51230 Fragaria vesca HOM05D002383 ORTHO05D002515 3.8e-11 72.4 82 46.3
FAN02G4557 Fragaria x ananassa HOM05D002383 ORTHO05D002515 3.8e-11 72.4 82 46.3
FAN14G3744 Fragaria x ananassa HOM05D002383 ORTHO05D002515 3.8e-11 72.4 82 46.3
AL7G49370 Arabidopsis lyrata HOM05D002383 ORTHO05D002515 4.9e-11 72.0 87 43.7
Manes.17G112300 Manihot esculenta HOM05D002383 ORTHO05D002515 4.9e-11 72.0 80 48.8
SalBow7G3295 Salvia bowleyana HOM05D002383 ORTHO05D002515 4.9e-11 72.0 76 48.7
CiPaw.05G183200 Carya illinoinensis HOM05D002383 ORTHO05D002515 6.4e-11 71.6 68 50.0
AT5G40460 Arabidopsis thaliana HOM05D002383 ORTHO05D002515 8.4e-11 71.2 87 43.7
Rhsim10G0017000 Rhododendron simsii HOM05D002383 ORTHO05D002515 1.1e-10 70.9 80 46.2
RcHm_v2.0_Chr2g0172811 Rosa chinensis HOM05D002383 ORTHO05D002515 1.1e-10 70.9 82 46.3
CiPaw.06G068500 Carya illinoinensis HOM05D002383 ORTHO05D002515 1.4e-10 70.5 69 49.3
Migut.H00078 Erythranthe guttata HOM05D002383 ORTHO05D002515 1.4e-10 70.5 76 50.0
CAN.G1057.2 Capsicum annuum HOM05D002383 ORTHO05D002515 2.4e-10 69.7 74 48.6
MD09G1027300 Malus domestica HOM05D002383 ORTHO05D002515 2.4e-10 69.7 80 47.5
Thecc.02G258100 Theobroma cacao HOM05D002383 ORTHO05D002515 2.4e-10 69.7 80 47.5
TAR371G1055 Trochodendron aralioides HOM05D002383 ORTHO05D002515 2.4e-10 69.7 78 47.4
CARHR261560 Cardamine hirsuta HOM05D002383 ORTHO05D002515 3.2e-10 69.3 86 43.0
Nn3g16740 Nelumbo nucifera HOM05D002383 ORTHO05D002515 3.2e-10 69.3 62 51.6
SGA_v2.0_scaffold224G42989 Striga asiatica HOM05D002383 ORTHO05D002515 3.2e-10 69.3 76 48.7
TAR622G1076 Trochodendron aralioides HOM05D002383 ORTHO05D002515 5.4e-10 68.6 77 46.8
Prupe.3G291500 Prunus persica HOM05D002383 ORTHO05D002515 7.1e-10 68.2 78 47.4
BraA04t17007Z Brassica rapa HOM05D002383 ORTHO05D002515 9.3e-10 67.8 81 44.4
Lsat_1_v5_gn_4_183900 Lactuca sativa HOM05D002383 ORTHO05D002515 9.3e-10 67.8 75 46.7
Peaxi162Scf00080g00104 Petunia axillaris HOM05D002383 ORTHO05D002515 9.3e-10 67.8 72 50.0
PGR142G2811 Punica granatum HOM05D002383 ORTHO05D002515 9.3e-10 67.8 77 50.6
CDE07G1210 Ceratophyllum demersum HOM05D002383 ORTHO05D002515 1.2e-09 67.4 73 39.7
COL.COLO4_29113 Corchorus olitorius HOM05D002383 ORTHO05D002515 1.2e-09 67.4 79 46.8
Thhalv10028250m.g Eutrema salsugineum HOM05D002383 ORTHO05D002515 1.2e-09 67.4 81 44.4
Solyc02g067810.1 Solanum lycopersicum HOM05D002383 ORTHO05D002515 1.2e-09 67.4 74 47.3
BcaB06g27511 Brassica carinata HOM05D002383 ORTHO05D002515 1.6e-09 67.0 80 45.0
Haze_12239 Corylus avellana HOM05D002383 ORTHO05D002515 1.6e-09 67.0 69 47.8
Sabra17G0061800 Salix brachista HOM05D002383 ORTHO05D002515 1.6e-09 67.0 78 46.2
Sp7g01460 Schrenkiella parvula HOM05D002383 ORTHO05D002515 1.6e-09 67.0 81 44.4
Atru.chr6.2391 Acer truncatum HOM05D002383 ORTHO05D002515 2.1e-09 66.6 81 46.9
SGA_v2.0_scaffold135G34905 Striga asiatica HOM05D002383 ORTHO05D002515 2.1e-09 66.6 76 42.1
CSS0002762 Camellia sinensis var. sinensis HOM05D002383 ORTHO05D002515 3.5e-09 65.9 77 46.8
Duzib248G0824 Durio zibethinus HOM05D002383 ORTHO05D002515 3.5e-09 65.9 82 45.1
TAR629G2295 Trochodendron aralioides HOM05D002383 ORTHO05D002515 3.5e-09 65.9 77 45.5
Aa31LG2G5040 Aethionema arabicum HOM05D002383 ORTHO05D002515 4.6e-09 65.5 87 43.7
A04p13490 Brassica napus HOM05D002383 ORTHO05D002515 4.6e-09 65.5 81 43.2
C04p47260 Brassica napus HOM05D002383 ORTHO05D002515 4.6e-09 65.5 81 43.2
BolC4t26325H Brassica oleracea HOM05D002383 ORTHO05D002515 4.6e-09 65.5 81 43.2
BraA06t27021Z Brassica rapa HOM05D002383 ORTHO05D002515 4.6e-09 65.5 86 41.9
Duzib251G0524 Durio zibethinus HOM05D002383 ORTHO05D002515 4.6e-09 65.5 84 42.9
Potri.017G070000 Populus trichocarpa HOM05D002383 ORTHO05D002515 4.6e-09 65.5 77 45.5
BolC9t53287H Brassica oleracea HOM05D002383 ORTHO05D002515 6.0e-09 65.1 86 40.7
HanXRQChr15g0475321 Helianthus annuus HOM05D002383 ORTHO05D002515 7.9e-09 64.7 74 44.6
Thecc.04G017100 Theobroma cacao HOM05D002383 ORTHO05D002515 7.9e-09 64.7 77 46.8
TWI36G1091 Tripterygium wilfordii HOM05D002383 ORTHO05D002515 7.9e-09 64.7 78 43.6
Sopen02g016920 Solanum pennellii HOM05D002383 ORTHO05D002515 1.0e-08 64.3 74 45.9
Duzib268G1316 Durio zibethinus HOM05D002383 ORTHO05D002515 1.3e-08 63.9 83 39.8
Gohir.A03G136100 Gossypium hirsutum HOM05D002383 ORTHO05D002515 1.3e-08 63.9 84 40.5
CSS0031549 Camellia sinensis var. sinensis HOM05D002383 ORTHO05D002515 1.8e-08 63.5 74 40.5
TWI56G1026 Tripterygium wilfordii HOM05D002383 ORTHO05D002515 1.8e-08 63.5 80 43.8
Aa31LG2G5060 Aethionema arabicum HOM05D002383 ORTHO05D002515 2.3e-08 63.2 87 41.4
Aqoxy5G03793 Aquilegia oxysepala HOM05D002383 ORTHO05D002515 2.3e-08 63.2 82 45.1
DCAR_021721 Daucus carota HOM05D002383 ORTHO05D002515 2.3e-08 63.2 72 41.7
Aa31LG9G1160 Aethionema arabicum HOM05D002383 ORTHO05D002515 3.0e-08 62.8 81 44.4
CSS0034273 Camellia sinensis var. sinensis HOM05D002383 ORTHO05D002515 3.0e-08 62.8 77 46.8
Gohir.A09G029100 Gossypium hirsutum HOM05D002383 ORTHO05D002515 3.0e-08 62.8 80 43.8
Gohir.D09G028600 Gossypium hirsutum HOM05D002383 ORTHO05D002515 3.0e-08 62.8 80 43.8
Gorai.006G033300 Gossypium raimondii HOM05D002383 ORTHO05D002515 3.0e-08 62.8 80 43.8
Lj4g0012935 Lotus japonicus HOM05D002383 ORTHO05D002515 3.0e-08 62.8 67 49.3
Gorai.005G179500 Gossypium raimondii HOM05D002383 ORTHO05D002515 3.9e-08 62.4 84 40.5
Hma1.2p1_2120F.1_g314410 Hydrangea macrophylla HOM05D002383 ORTHO05D002515 3.9e-08 62.4 80 43.8
MD17G1027200 Malus domestica HOM05D002383 ORTHO05D002515 3.9e-08 62.4 68 45.6
Sc03g0007450 Simmondsia chinensis HOM05D002383 ORTHO05D002515 3.9e-08 62.4 71 40.8
PGSC0003DMG400006915 Solanum tuberosum HOM05D002383 ORTHO05D002515 3.9e-08 62.4 74 44.6
Actinidia05994 Actinidia chinensis HOM05D002383 ORTHO05D002515 5.1e-08 62.0 64 46.9
Lalb_Chr05g0216591 Lupinus albus HOM05D002383 ORTHO05D002515 5.1e-08 62.0 79 45.6
BcaC04g23898 Brassica carinata HOM05D002383 ORTHO05D002515 6.7e-08 61.6 86 39.5
C09p03670 Brassica napus HOM05D002383 ORTHO05D002515 6.7e-08 61.6 86 39.5
MBI16_g23839_MAGBIO Magnolia biondii HOM05D002383 ORTHO05D002515 6.7e-08 61.6 82 36.6
Nitab4.5_0002468g0100 Nicotiana tabacum HOM05D002383 ORTHO05D002515 6.7e-08 61.6 75 44.0
CANSAT64G1350 Cannabis sativa HOM05D002383 ORTHO05D002515 8.7e-08 61.2 95 41.1
Ciclev10017241m.g Citrus clementina HOM05D002383 ORTHO05D002515 8.7e-08 61.2 84 45.2
Duzib187G0948 Durio zibethinus HOM05D002383 ORTHO05D002515 8.7e-08 61.2 76 42.1
Cfa009202 Carpinus fangiana HOM05D002383 ORTHO05D002515 1.1e-07 60.8 70 45.7
Glyma.01G026600 Glycine max HOM05D002383 ORTHO05D002515 1.1e-07 60.8 77 42.9
Duzib264G1049 Durio zibethinus HOM05D002383 ORTHO05D002515 1.5e-07 60.5 79 44.3
Gohir.D02G159400 Gossypium hirsutum HOM05D002383 ORTHO05D002515 1.5e-07 60.5 84 39.3
Aqoxy3G01198 Aquilegia oxysepala HOM05D002383 ORTHO05D002515 1.9e-07 60.1 80 42.5
Nitab4.5_0003318g0160 Nicotiana tabacum HOM05D002383 ORTHO05D002515 1.9e-07 60.1 76 42.1
MSTRG.570 Avicennia marina HOM05D002383 ORTHO05D002515 2.5e-07 59.7 75 40.0
HanXRQChr14g0450551 Helianthus annuus HOM05D002383 ORTHO05D002515 2.5e-07 59.7 73 42.5
Nitab4.5_0003318g0140 Nicotiana tabacum HOM05D002383 ORTHO05D002515 2.5e-07 59.7 77 40.3
CSS0032025 Camellia sinensis var. sinensis HOM05D002383 ORTHO05D002515 3.3e-07 59.3 72 41.7
Hma1.2p1_0160F.1_g071240 Hydrangea macrophylla HOM05D002383 ORTHO05D002515 3.3e-07 59.3 65 43.1
PGR083G1142 Punica granatum HOM05D002383 ORTHO05D002515 3.3e-07 59.3 85 41.2
THA.LOC104805371 Tarenaya hassleriana HOM05D002383 ORTHO05D002515 4.3e-07 58.9 88 37.5
Prupe.1G243100 Prunus persica HOM05D002383 ORTHO05D002515 5.6e-07 58.5 67 43.3
CARHR051790 Cardamine hirsuta HOM05D002383 ORTHO05D002515 9.6e-07 57.8 74 37.8
Lsat_1_v5_gn_0_39801 Lactuca sativa HOM05D002383 ORTHO05D002515 9.6e-07 57.8 77 42.9
PSO782G0538 Papaver somniferum HOM05D002383 ORTHO05D002515 9.6e-07 57.8 82 46.3
Hma1.2p1_0223F.1_g094100 Hydrangea macrophylla HOM05D002383 ORTHO05D002515 1.3e-06 57.4 72 43.1
Sp2g16760 Schrenkiella parvula HOM05D002383 ORTHO05D002515 1.3e-06 57.4 87 37.9
TWI18G1125 Tripterygium wilfordii HOM05D002383 ORTHO05D002515 1.3e-06 57.4 78 39.7
Glyma.02G038200 Glycine max HOM05D002383 ORTHO05D002515 1.6e-06 57.0 74 40.5
Psat4g115800 Pisum sativum HOM05D002383 ORTHO05D002515 1.6e-06 57.0 89 40.4
Sed0020664 Sechium edule HOM05D002383 ORTHO05D002515 1.6e-06 57.0 77 40.3
THA.LOC104825323 Tarenaya hassleriana HOM05D002383 ORTHO05D002515 1.6e-06 57.0 79 41.8
Eucgr.I01742 Eucalyptus grandis HOM05D002383 ORTHO05D002515 2.8e-06 56.2 70 47.1
Sopen02g031160 Solanum pennellii HOM05D002383 ORTHO05D002515 2.8e-06 56.2 78 42.3
TPR.G34660 Trifolium pratense HOM05D002383 ORTHO05D002515 2.8e-06 56.2 71 46.5
TWI75G1208 Tripterygium wilfordii HOM05D002383 ORTHO05D002515 2.8e-06 56.2 78 42.3
Lalb_Chr09g0334821 Lupinus albus HOM05D002383 ORTHO05D002515 3.7e-06 55.8 82 46.3
PSO063G0306 Papaver somniferum HOM05D002383 ORTHO05D002515 3.7e-06 55.8 82 45.1
PGSC0003DMG400012600 Solanum tuberosum HOM05D002383 ORTHO05D002515 3.7e-06 55.8 79 40.5
Carub.0007s3513 Capsella rubella HOM05D002383 ORTHO05D002515 4.8e-06 55.5 91 39.6
MELO3C021579.2 Cucumis melo HOM05D002383 ORTHO05D002515 4.8e-06 55.5 75 44.0
MD13G1102700 Malus domestica HOM05D002383 ORTHO05D002515 4.8e-06 55.5 63 46.0
vmacro01128 Vaccinium macrocarpon HOM05D005436 ORTHO05D006215 4.8e-06 55.5 72 44.4
Lj2g0006785 Lotus japonicus HOM05D002383 ORTHO05D002515 6.2e-06 55.1 82 43.9
Lalb_Chr02g0160501 Lupinus albus HOM05D002383 ORTHO05D002515 6.2e-06 55.1 64 45.3
PSO478G4643 Papaver somniferum HOM05D002383 ORTHO05D002515 6.2e-06 55.1 82 45.1
THA.LOC104809580 Tarenaya hassleriana HOM05D002383 ORTHO05D002515 6.2e-06 55.1 79 39.2
Lalb_Chr06g0175741 Lupinus albus HOM05D002383 ORTHO05D002515 8.1e-06 54.7 65 46.2


User provided reference genes

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