Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017906.1 Olea europaea HOM05D000190 ORTHO05D018297 9.7e-51 203.4 117 100.0
Actinidia15513 Actinidia chinensis HOM05D000190 ORTHO05D000113 7.0e-17 90.9 114 49.1
CSS0017036 Camellia sinensis var. sinensis HOM05D000190 ORTHO05D000113 6.6e-15 84.3 117 47.9
Cc10_g00390 Coffea canephora HOM05D000190 ORTHO05D000113 1.5e-14 83.2 115 47.0
Hma1.2p1_0699F.1_g205610 Hydrangea macrophylla HOM05D000190 ORTHO05D000113 1.5e-14 83.2 114 47.4
Dinv31974 Davidia involucrata HOM05D000190 ORTHO05D000113 9.5e-14 80.5 114 48.2
QL02p015265 Quercus lobata HOM05D000190 ORTHO05D018297 4.0e-12 75.1 115 46.1
TAR628G0292 Trochodendron aralioides HOM05D000190 ORTHO05D000113 1.5e-11 73.2 117 43.6
CSS0032204 Camellia sinensis var. sinensis HOM05D000190 ORTHO05D000113 2.6e-11 72.4 119 45.4
Lj1g0000686 Lotus japonicus HOM05D000190 ORTHO05D000113 4.4e-11 71.6 113 45.1
MD06G1006000 Malus domestica HOM05D000190 ORTHO05D018297 5.8e-11 71.2 116 44.0
arahy.Tifrunner.gnm1.ann1.XPJ3VE Arachis hypogaea HOM05D000190 ORTHO05D000113 2.2e-10 69.3 121 38.0
TAR376G0267 Trochodendron aralioides HOM05D000190 ORTHO05D000113 3.7e-10 68.6 118 44.1
PSO675G8011 Papaver somniferum HOM05D000190 ORTHO05D000113 6.4e-10 67.8 122 41.8
Phvul.009G006800 Phaseolus vulgaris HOM05D000190 ORTHO05D000113 8.3e-10 67.4 112 45.5
Prupe.5G007700 Prunus persica HOM05D000190 ORTHO05D000113 1.4e-09 66.6 117 42.7
Dinv40204 Davidia involucrata HOM05D000190 ORTHO05D000113 1.9e-09 66.2 118 43.2
Glyma.04G015700 Glycine max HOM05D000190 ORTHO05D000113 2.4e-09 65.9 114 43.9
TWI12G1370 Tripterygium wilfordii HOM05D000190 ORTHO05D000113 3.2e-09 65.5 116 43.1
Cfa007101 Carpinus fangiana HOM05D000190 ORTHO05D000113 9.2e-09 63.9 122 41.0
SalBow6G4045 Salvia bowleyana HOM05D000190 ORTHO05D000113 1.2e-08 63.5 117 41.0
TWI36G1745 Tripterygium wilfordii HOM05D000190 ORTHO05D000113 1.6e-08 63.2 115 42.6
Migut.N02974 Erythranthe guttata HOM05D000190 ORTHO05D000113 2.1e-08 62.8 125 36.8
Manes.05G125400 Manihot esculenta HOM05D000190 ORTHO05D000113 3.5e-08 62.0 117 37.6
Thecc.08G063400 Theobroma cacao HOM05D000190 ORTHO05D000113 3.5e-08 62.0 121 38.8
Glyma.06G015700 Glycine max HOM05D000190 ORTHO05D000113 4.6e-08 61.6 114 42.1
QL06p053252 Quercus lobata HOM05D000190 ORTHO05D018297 4.6e-08 61.6 112 40.2
COL.COLO4_05642 Corchorus olitorius HOM05D000190 ORTHO05D000113 1.7e-07 59.7 124 39.5
Eucgr.I02213 Eucalyptus grandis HOM05D000190 ORTHO05D000113 1.7e-07 59.7 83 45.8
HanXRQChr06g0185291 Helianthus annuus HOM05D000190 ORTHO05D000113 1.7e-07 59.7 115 37.4
Potri.005G254300 Populus trichocarpa HOM05D000190 ORTHO05D000113 1.7e-07 59.7 102 39.2
Haze_03629 Corylus avellana HOM05D000190 ORTHO05D000113 2.3e-07 59.3 114 40.4
Psat5g010400 Pisum sativum HOM05D000190 ORTHO05D000113 2.3e-07 59.3 119 37.8
PGR119G0886 Punica granatum HOM05D000190 ORTHO05D000113 3.0e-07 58.9 120 36.7
Medtr3g115940 Medicago truncatula HOM05D000190 ORTHO05D000113 3.9e-07 58.5 117 38.5
VMungo1309G0142 Vigna mungo HOM05D000190 ORTHO05D000113 3.9e-07 58.5 113 43.4
Aqoxy6G01569 Aquilegia oxysepala HOM05D000190 ORTHO05D000113 5.1e-07 58.2 116 40.5
Aqoxy6G01575 Aquilegia oxysepala HOM05D000190 ORTHO05D000113 5.1e-07 58.2 116 40.5
Ciclev10003446m.g Citrus clementina HOM05D000190 ORTHO05D000113 6.6e-07 57.8 127 37.0
Potri.002G007000 Populus trichocarpa HOM05D000190 ORTHO05D000113 6.6e-07 57.8 125 39.2
Ca_15396_v3 Cicer arietinum L. HOM05D000190 ORTHO05D000113 1.1e-06 57.0 116 36.2
FAN08G3670 Fragaria x ananassa HOM05D000190 ORTHO05D000113 1.1e-06 57.0 120 39.2
PSO541G6544 Papaver somniferum HOM05D000190 ORTHO05D000113 1.1e-06 57.0 120 35.8
CSS0018691 Camellia sinensis var. sinensis HOM05D000190 ORTHO05D018297 1.5e-06 56.6 100 42.0
CSS0039025 Camellia sinensis var. sinensis HOM05D000190 ORTHO05D018297 1.5e-06 56.6 100 42.0
FAN04G1758 Fragaria x ananassa HOM05D000190 ORTHO05D000113 1.5e-06 56.6 120 39.2
Cc07_g12040 Coffea canephora HOM05D000190 ORTHO05D000113 1.9e-06 56.2 123 34.1
FvH4_5g25790 Fragaria vesca HOM05D000190 ORTHO05D000113 1.9e-06 56.2 120 39.2
FAN18G1374 Fragaria x ananassa HOM05D000190 ORTHO05D000113 1.9e-06 56.2 120 39.2
ECA238G1592 Erigeron canadensis HOM05D000190 ORTHO05D000113 3.3e-06 55.5 116 36.2
Gorai.002G113800 Gossypium raimondii HOM05D000190 ORTHO05D000113 5.6e-06 54.7 124 35.5
Gohir.D01G088100 Gossypium hirsutum HOM05D000190 ORTHO05D000113 9.5e-06 53.9 124 35.5
HanXRQChr14g0427871 Helianthus annuus HOM05D000190 ORTHO05D000113 9.5e-06 53.9 115 34.8
RcHm_v2.0_Chr4g0399511 Rosa chinensis HOM05D000190 ORTHO05D000113 9.5e-06 53.9 119 40.3
RcHm_v2.0_Chr7g0216251 Rosa chinensis HOM05D000190 ORTHO05D000113 9.5e-06 53.9 119 40.3


User provided reference genes

Program Settings