Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017835.1 Olea europaea HOM05D000764 ORTHO05D004953 6.8e-162 573.9 289 100.0
Oeu021897.1 Olea europaea HOM05D000764 ORTHO05D004953 2.3e-40 170.2 110 82.7
Dinv33723 Davidia involucrata HOM05D000764 ORTHO05D004953 8.9e-29 131.7 109 65.1
Dinv06519 Davidia involucrata HOM05D000764 ORTHO05D004953 2.6e-28 130.2 109 63.3
GSVIVG01025465001 Vitis vinifera HOM05D000764 ORTHO05D004953 2.2e-27 127.1 109 64.2
Cc01_g00030 Coffea canephora HOM05D000764 ORTHO05D004953 4.9e-27 125.9 129 54.3
Atru.chr3.2095 Acer truncatum HOM05D000764 ORTHO05D004953 8.3e-27 125.2 109 62.4
CSS0037597 Camellia sinensis var. sinensis HOM05D000764 ORTHO05D004953 1.4e-26 124.4 109 65.1
Lj2A763G35 Lonicera japonica HOM05D000764 ORTHO05D004953 1.9e-26 124.0 112 60.7
Rhsim03G0149100 Rhododendron simsii HOM05D000764 ORTHO05D004953 4.1e-26 122.9 109 61.5
MSTRG.16793 Avicennia marina HOM05D000764 ORTHO05D004953 9.2e-26 121.7 109 58.7
CiPaw.13G176800 Carya illinoinensis HOM05D000764 ORTHO05D004953 9.2e-26 121.7 109 64.2
Nitab4.5_0000799g0100 Nicotiana tabacum HOM05D000764 ORTHO05D004953 1.6e-25 120.9 109 58.7
Nitab4.5_0005544g0060 Nicotiana tabacum HOM05D000764 ORTHO05D004953 3.5e-25 119.8 109 58.7
vmacro06919 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 4.6e-25 119.4 129 53.5
Thecc.05G133300 Theobroma cacao HOM05D000764 ORTHO05D004953 7.8e-25 118.6 109 59.6
Manes.14G121800 Manihot esculenta HOM05D000764 ORTHO05D004953 1.0e-24 118.2 108 60.2
arahy.Tifrunner.gnm1.ann1.ML2TY5 Arachis hypogaea HOM05D000764 ORTHO05D004953 1.3e-24 117.9 109 60.6
arahy.Tifrunner.gnm1.ann1.W7TQKX Arachis hypogaea HOM05D000764 ORTHO05D004953 1.3e-24 117.9 109 60.6
ECA233G5672 Erigeron canadensis HOM05D000764 ORTHO05D004953 1.3e-24 117.9 127 53.5
Nitab4.5_0003134g0150 Nicotiana tabacum HOM05D000764 ORTHO05D004953 1.3e-24 117.9 109 57.8
Potri.003G220800 Populus trichocarpa HOM05D000764 ORTHO05D004953 5.1e-24 115.9 109 58.7
QL01p009034 Quercus lobata HOM05D000764 ORTHO05D004953 1.1e-23 114.8 109 60.6
SGA_v2.0_scaffold58G20565 Striga asiatica HOM05D000764 ORTHO05D004953 1.1e-23 114.8 110 59.1
Gohir.D08G248200 Gossypium hirsutum HOM05D000764 ORTHO05D004953 3.3e-23 113.2 109 58.7
Gorai.004G264800 Gossypium raimondii HOM05D000764 ORTHO05D004953 3.3e-23 113.2 109 58.7
Prupe.6G003600 Prunus persica HOM05D000764 ORTHO05D004953 3.3e-23 113.2 127 55.9
CAN.G1237.43 Capsicum annuum HOM05D000764 ORTHO05D004953 5.6e-23 112.5 109 56.9
Ciclev10014014m.g Citrus clementina HOM05D000764 ORTHO05D004953 7.3e-23 112.1 108 58.3
Gohir.A08G227900 Gossypium hirsutum HOM05D000764 ORTHO05D004953 7.3e-23 112.1 109 57.8
MD03G1004100 Malus domestica HOM05D000764 ORTHO05D004953 7.3e-23 112.1 127 55.9
Potri.001G004200 Populus trichocarpa HOM05D000764 ORTHO05D004953 1.2e-22 111.3 109 56.9
Lj6g0018726 Lotus japonicus HOM05D000764 ORTHO05D004953 1.6e-22 110.9 109 56.0
Sabra01G0002900 Salix brachista HOM05D000764 ORTHO05D004953 1.6e-22 110.9 109 56.9
SalBow6G5302 Salvia bowleyana HOM05D000764 ORTHO05D004953 1.6e-22 110.9 110 57.3
THA.LOC104822680 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 1.6e-22 110.9 109 56.9
Haze_22943 Corylus avellana HOM05D000764 ORTHO05D004953 2.8e-22 110.2 109 58.7
Peaxi162Scf00970g00016 Petunia axillaris HOM05D000764 ORTHO05D004953 6.2e-22 109.0 109 56.0
TAR623G0710 Trochodendron aralioides HOM05D000764 ORTHO05D004953 6.2e-22 109.0 109 56.9
MELO3C015581.2 Cucumis melo HOM05D000764 ORTHO05D004953 8.1e-22 108.6 109 57.8
CsaV3_1G041680 Cucumis sativus L. HOM05D000764 ORTHO05D004953 8.1e-22 108.6 109 57.8
Solyc04g039950.4 Solanum lycopersicum HOM05D000764 ORTHO05D004953 1.4e-21 107.8 109 55.0
FAN16G0168 Fragaria x ananassa HOM05D000764 ORTHO05D004953 1.8e-21 107.5 136 50.7
TWI60G0851 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 2.3e-21 107.1 111 57.7
Hund07595 Selenicereus undatus HOM05D000764 ORTHO05D004953 3.1e-21 106.7 109 55.0
TPR.G19327 Trifolium pratense HOM05D000764 ORTHO05D004953 3.1e-21 106.7 110 54.5
Thhalv10011178m.g Eutrema salsugineum HOM05D000764 ORTHO05D004953 4.0e-21 106.3 109 56.0
RcHm_v2.0_Chr5g0083741 Rosa chinensis HOM05D000764 ORTHO05D004953 5.2e-21 105.9 109 58.7
Cfa009565 Carpinus fangiana HOM05D000764 ORTHO05D004953 6.8e-21 105.5 109 56.9
Sc21g0002730 Simmondsia chinensis HOM05D000764 ORTHO05D004953 6.8e-21 105.5 109 53.2
THA.LOC104810327 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 6.8e-21 105.5 109 55.0
FAN11G0762 Fragaria x ananassa HOM05D000764 ORTHO05D004953 8.9e-21 105.1 138 48.6
FAN21G0270 Fragaria x ananassa HOM05D000764 ORTHO05D004953 8.9e-21 105.1 111 55.9
HanXRQChr13g0405791 Helianthus annuus HOM05D000764 ORTHO05D004953 8.9e-21 105.1 111 55.0
Sopen04g010120 Solanum pennellii HOM05D000764 ORTHO05D004953 8.9e-21 105.1 109 56.0
ClCG03G014510 Citrullus lanatus HOM05D000764 ORTHO05D004953 1.2e-20 104.8 109 57.8
Duzib128G0342 Durio zibethinus HOM05D000764 ORTHO05D004953 1.5e-20 104.4 107 55.1
PGR119G0322 Punica granatum HOM05D000764 ORTHO05D004953 1.5e-20 104.4 109 56.0
CAN.G610.44 Capsicum annuum HOM05D000764 ORTHO05D004953 3.4e-20 103.2 140 45.7
Sabra03G0164300 Salix brachista HOM05D000764 ORTHO05D004953 3.4e-20 103.2 108 55.6
FvH4_3g45550 Fragaria vesca HOM05D000764 ORTHO05D004953 4.4e-20 102.8 109 56.0
Lalb_Chr23g0278471 Lupinus albus HOM05D000764 ORTHO05D004953 4.4e-20 102.8 109 53.2
CAN.G1237.45 Capsicum annuum HOM05D000764 ORTHO05D004953 5.8e-20 102.4 104 54.8
Lsat_1_v5_gn_6_53100 Lactuca sativa HOM05D000764 ORTHO05D004953 7.6e-20 102.1 111 52.3
Carub.0001s4383 Capsella rubella HOM05D000764 ORTHO05D004953 9.9e-20 101.7 109 54.1
TWI32G0740 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 1.7e-19 100.9 109 56.0
Sed0024847 Sechium edule HOM05D000764 ORTHO05D004953 2.9e-19 100.1 109 56.0
Medtr3g083500 Medicago truncatula HOM05D000764 ORTHO05D004953 4.9e-19 99.4 110 51.8
Phvul.001G269300 Phaseolus vulgaris HOM05D000764 ORTHO05D004953 4.9e-19 99.4 109 51.4
MBI11_g24613_MAGBIO Magnolia biondii HOM05D000764 ORTHO05D004953 6.4e-19 99.0 110 53.6
Ca_16376_v3 Cicer arietinum L. HOM05D000764 ORTHO05D004953 8.3e-19 98.6 110 51.8
Glyma.11G256800 Glycine max HOM05D000764 ORTHO05D004953 1.1e-18 98.2 109 50.5
AT1G55325 Arabidopsis thaliana HOM05D000764 ORTHO05D004953 1.4e-18 97.8 109 52.3
Migut.L00381 Erythranthe guttata HOM05D000764 ORTHO05D004953 1.4e-18 97.8 128 49.2
CARHR044980 Cardamine hirsuta HOM05D000764 ORTHO05D004953 1.9e-18 97.4 109 51.4
CANSAT11G1226 Cannabis sativa HOM05D000764 ORTHO05D004953 2.4e-18 97.1 111 55.9
FAN25G3812 Fragaria x ananassa HOM05D000764 ORTHO05D004953 2.4e-18 97.1 105 56.2
Migut.L00380 Erythranthe guttata HOM05D000764 ORTHO05D004953 3.2e-18 96.7 110 53.6
DCAR_029576 Daucus carota HOM05D000764 ORTHO05D004953 4.1e-18 96.3 109 54.1
Sp1g41000 Schrenkiella parvula HOM05D000764 ORTHO05D004953 4.1e-18 96.3 109 51.4
Glyma.18G000100 Glycine max HOM05D000764 ORTHO05D004953 5.4e-18 95.9 109 49.5
BolC6t36790H Brassica oleracea HOM05D000764 ORTHO05D004953 7.1e-18 95.5 109 51.4
BolC6t36102H Brassica oleracea HOM05D000764 ORTHO05D004953 1.6e-17 94.4 111 52.3
Aa31LG10G1120 Aethionema arabicum HOM05D000764 ORTHO05D004953 2.1e-17 94.0 108 50.9
AL1G63370 Arabidopsis lyrata HOM05D000764 ORTHO05D004953 2.1e-17 94.0 109 51.4
C06p10270 Brassica napus HOM05D000764 ORTHO05D004953 4.6e-17 92.8 111 51.4
A05p17530 Brassica napus HOM05D000764 ORTHO05D004953 6.0e-17 92.4 109 50.5
C06p15980 Brassica napus HOM05D000764 ORTHO05D004953 6.0e-17 92.4 109 50.5
BraA05t20647Z Brassica rapa HOM05D000764 ORTHO05D004953 6.0e-17 92.4 109 50.5
Eucgr.J01768 Eucalyptus grandis HOM05D000764 ORTHO05D004953 1.3e-16 91.3 127 51.2
A06p00260 Brassica napus HOM05D000764 ORTHO05D004953 2.3e-16 90.5 111 50.5
BraA06t23242Z Brassica rapa HOM05D000764 ORTHO05D004953 2.3e-16 90.5 111 50.5
EL10Ac4g10385 Beta vulgaris HOM05D000764 ORTHO05D004953 3.0e-16 90.1 109 49.5
Aqoxy3G01104 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 1.5e-15 87.8 110 47.3
AUR62040904 Chenopodium quinoa HOM05D000764 ORTHO05D004953 1.5e-15 87.8 108 49.1
AUR62019165 Chenopodium quinoa HOM05D000764 ORTHO05D004953 3.3e-15 86.7 108 50.9
CAN.G1237.21 Capsicum annuum HOM05D000764 ORTHO05D004953 1.2e-14 84.7 103 48.5
VMungo1080G1230 Vigna mungo HOM05D000764 ORTHO05D004953 1.8e-13 80.9 99 46.5
SHI31298 Sapria himalayana HOM05D000764 ORTHO05D004953 2.4e-13 80.5 108 48.1
ATR0490G003 Amborella trichopoda HOM05D000764 ORTHO05D004953 9.9e-12 75.1 128 39.1
BcaC08g44192 Brassica carinata HOM05D000764 ORTHO05D004953 2.9e-11 73.6 107 43.9
PSO339G2492 Papaver somniferum HOM05D000764 ORTHO05D004953 2.9e-11 73.6 128 42.2
Psat5g101160 Pisum sativum HOM05D000764 ORTHO05D004953 8.4e-11 72.0 152 34.9
Psat6g137480 Pisum sativum HOM05D000493 ORTHO05D004953 1.1e-10 71.6 104 45.2
Nn7g35865 Nelumbo nucifera HOM05D000764 ORTHO05D004953 1.4e-10 71.2 108 46.3
CDE10G0477 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 3.5e-09 66.6 110 40.0
Zm00001eb379470 Zea mays HOM05D000764 ORTHO05D004953 1.9e-07 60.8 108 42.6
Rhsim12G0118500 Rhododendron simsii HOM05D000764 ORTHO05D004953 1.6e-06 57.8 53 52.8


User provided reference genes

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