Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017816.1 Olea europaea HOM05D004971 ORTHO05D006289 1.3e-142 509.6 240 100.0
Oeu000366.2 Olea europaea HOM05D004971 ORTHO05D006289 6.7e-115 417.5 240 82.1
MSTRG.19566 Avicennia marina HOM05D004971 ORTHO05D006289 2.5e-101 372.5 240 72.5
SGA_v2.0_scaffold20G09148 Striga asiatica HOM05D004971 ORTHO05D006289 2.2e-97 359.4 240 70.0
Dinv41645 Davidia involucrata HOM05D004971 ORTHO05D006289 3.7e-97 358.6 240 67.9
SGA_v2.0_scaffold22G09903 Striga asiatica HOM05D004971 ORTHO05D006289 3.7e-97 358.6 240 69.6
Rhsim03G0239000 Rhododendron simsii HOM05D004971 ORTHO05D006289 5.0e-94 348.2 240 66.7
Migut.J01131 Erythranthe guttata HOM05D004971 ORTHO05D006289 1.9e-93 346.3 240 67.1
CSS0031404 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 8.0e-92 340.9 240 65.0
Cc06_g10130 Coffea canephora HOM05D004971 ORTHO05D006289 9.8e-90 334.0 240 64.6
GSVIVG01015340001 Vitis vinifera HOM05D004971 ORTHO05D006289 1.3e-89 333.6 241 67.2
Sopen05g028390 Solanum pennellii HOM05D004971 ORTHO05D006289 1.1e-85 320.5 240 62.1
ECA240G1764 Erigeron canadensis HOM05D004971 ORTHO05D006289 2.5e-85 319.3 240 64.6
unitig_748.g8739 Utricularia gibba HOM05D004971 ORTHO05D006289 2.5e-85 319.3 240 61.7
Nitab4.5_0003331g0010 Nicotiana tabacum HOM05D004971 ORTHO05D006289 5.6e-85 318.2 240 60.8
PGSC0003DMG400021659 Solanum tuberosum HOM05D004971 ORTHO05D006289 5.6e-85 318.2 240 61.7
HanXRQChr09g0239411 Helianthus annuus HOM05D004971 ORTHO05D006289 1.6e-84 316.6 240 62.9
Nitab4.5_0000066g0130 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.6e-84 316.6 240 61.2
Solyc05g050000.3 Solanum lycopersicum HOM05D004971 ORTHO05D006289 2.1e-84 316.2 245 61.2
Lsat_1_v5_gn_7_41360 Lactuca sativa HOM05D004971 ORTHO05D006289 1.8e-83 313.2 240 63.8
PGR102G0147 Punica granatum HOM05D004971 ORTHO05D006289 4.0e-83 312.0 241 63.1
CiPaw.03G227700 Carya illinoinensis HOM05D004971 ORTHO05D006289 4.4e-82 308.5 241 63.1
CAN.G399.3 Capsicum annuum HOM05D004971 ORTHO05D006289 5.8e-82 308.1 240 61.7
vmacro06238 Vaccinium macrocarpon HOM05D004971 ORTHO05D006289 1.7e-81 306.6 294 51.7
CANSAT56G2306 Cannabis sativa HOM05D004971 ORTHO05D006289 8.3e-81 304.3 241 62.2
Lalb_Chr05g0223101 Lupinus albus HOM05D004971 ORTHO05D006289 1.9e-80 303.1 244 59.0
Prupe.7G224700 Prunus persica HOM05D004971 ORTHO05D006289 4.1e-80 302.0 241 61.4
CANSAT56G1645 Cannabis sativa HOM05D004971 ORTHO05D006289 1.6e-79 300.1 241 61.8
Actinidia32663 Actinidia chinensis HOM05D004971 ORTHO05D006289 4.6e-79 298.5 240 58.3
AT5G51130 Arabidopsis thaliana HOM05D004971 ORTHO05D006289 6.0e-79 298.1 242 60.3
HanXRQChr03g0061421 Helianthus annuus HOM05D004971 ORTHO05D006289 6.0e-79 298.1 241 59.8
Thecc.09G104800 Theobroma cacao HOM05D004971 ORTHO05D006289 1.3e-78 297.0 245 59.6
VMungo0251G3379 Vigna mungo HOM05D004971 ORTHO05D006289 2.3e-78 296.2 247 59.1
Carub.0008s1117 Capsella rubella HOM05D004971 ORTHO05D006289 1.9e-77 293.1 240 58.8
Glyma.08G035500 Glycine max HOM05D004971 ORTHO05D006289 1.9e-77 293.1 244 58.2
AL8G25390 Arabidopsis lyrata HOM05D004971 ORTHO05D006289 2.5e-77 292.7 240 59.2
Aa31LG3G7640 Aethionema arabicum HOM05D004971 ORTHO05D006289 5.6e-77 291.6 240 60.0
Potri.018G084700 Populus trichocarpa HOM05D004971 ORTHO05D006289 7.3e-77 291.2 241 57.3
CARHR256940 Cardamine hirsuta HOM05D004971 ORTHO05D006289 1.2e-76 290.4 240 59.2
COL.COLO4_34800 Corchorus olitorius HOM05D004971 ORTHO05D006289 1.2e-76 290.4 240 57.9
Eucgr.C03795 Eucalyptus grandis HOM05D004971 ORTHO05D006289 1.6e-76 290.0 246 58.1
Sabra18G0073100 Salix brachista HOM05D004971 ORTHO05D006289 1.6e-76 290.0 241 56.8
Medtr8g102950 Medicago truncatula HOM05D004971 ORTHO05D006289 2.1e-76 289.7 241 58.1
THA.LOC104811095 Tarenaya hassleriana HOM05D004971 ORTHO05D006289 2.8e-76 289.3 240 59.2
Peaxi162Scf00539g00614 Petunia axillaris HOM05D004971 ORTHO05D006289 3.6e-76 288.9 240 57.1
Lj4g0001585 Lotus japonicus HOM05D004971 ORTHO05D006289 6.2e-76 288.1 240 55.8
QL01p004043 Quercus lobata HOM05D004971 ORTHO05D006289 2.3e-75 286.2 239 59.4
Thhalv10014188m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 5.2e-75 285.0 240 58.3
TPR.G23453 Trifolium pratense HOM05D004971 ORTHO05D006289 5.2e-75 285.0 241 57.3
TAR626G1908 Trochodendron aralioides HOM05D001382 ORTHO05D006289 8.9e-75 284.3 238 57.6
TAR636G2606 Trochodendron aralioides HOM05D004971 ORTHO05D006289 2.0e-74 283.1 238 57.1
RcHm_v2.0_Chr2g0091361 Rosa chinensis HOM05D004971 ORTHO05D006289 2.6e-74 282.7 241 57.3
Atru.chr7.1418 Acer truncatum HOM05D004971 ORTHO05D006289 4.4e-74 282.0 242 58.3
Phvul.002G310900 Phaseolus vulgaris HOM05D004971 ORTHO05D006289 5.8e-74 281.6 244 56.1
arahy.Tifrunner.gnm1.ann1.050WC1 Arachis hypogaea HOM05D004971 ORTHO05D006289 2.2e-73 279.6 252 54.0
Sc08g0007770 Simmondsia chinensis HOM05D004971 ORTHO05D006289 2.2e-73 279.6 239 55.2
Gohir.D07G007800 Gossypium hirsutum HOM05D004971 ORTHO05D006289 5.4e-72 275.0 241 56.0
Gorai.001G007500 Gossypium raimondii HOM05D004971 ORTHO05D006289 5.4e-72 275.0 241 56.0
BcaB05g24018 Brassica carinata HOM05D004971 ORTHO05D006289 7.1e-72 274.6 244 57.4
MD15G1192600 Malus domestica HOM05D004971 ORTHO05D006289 9.2e-72 274.2 241 55.6
Sp6g13340 Schrenkiella parvula HOM05D004971 ORTHO05D006289 1.6e-71 273.5 243 57.6
BcaC03g14623 Brassica carinata HOM05D004971 ORTHO05D006289 3.5e-71 272.3 241 56.8
A02p12480 Brassica napus HOM05D004971 ORTHO05D006289 3.5e-71 272.3 243 56.0
BolC2t08195H Brassica oleracea HOM05D004971 ORTHO05D006289 3.5e-71 272.3 241 56.8
BraA02t06311Z Brassica rapa HOM05D004971 ORTHO05D006289 3.5e-71 272.3 243 56.0
Gohir.A07G004400 Gossypium hirsutum HOM05D004971 ORTHO05D006289 3.5e-71 272.3 241 55.6
C02p20580 Brassica napus HOM05D004971 ORTHO05D006289 4.6e-71 271.9 241 56.8
BcaC01g06076 Brassica carinata HOM05D004971 ORTHO05D006289 1.3e-70 270.4 240 56.2
ClCG06G008900 Citrullus lanatus HOM05D004971 ORTHO05D006289 1.7e-70 270.0 236 53.8
arahy.Tifrunner.gnm1.ann1.R8N6MQ Arachis hypogaea HOM05D004971 ORTHO05D006289 2.3e-70 269.6 250 52.0
Nn3g18146 Nelumbo nucifera HOM05D004971 ORTHO05D006289 2.3e-70 269.6 241 53.9
FAN28G1806 Fragaria x ananassa HOM05D001382 ORTHO05D006289 1.1e-69 267.3 241 54.4
Hund26242 Selenicereus undatus HOM05D004971 ORTHO05D006289 1.5e-69 266.9 242 53.7
FvH4_1g05710 Fragaria vesca HOM05D004971 ORTHO05D006289 2.5e-69 266.2 241 54.4
Psat7g014440 Pisum sativum HOM05D004971 ORTHO05D006289 3.3e-69 265.8 234 55.6
A03p16290 Brassica napus HOM05D004971 ORTHO05D006289 5.6e-69 265.0 240 55.8
BraA03t10920Z Brassica rapa HOM05D004971 ORTHO05D006289 5.6e-69 265.0 241 55.2
FAN26G3039 Fragaria x ananassa HOM05D001382 ORTHO05D001266 5.6e-69 265.0 241 53.5
FAN23G0317 Fragaria x ananassa HOM05D001382 ORTHO05D006289 7.3e-69 264.6 241 53.9
BcaC01g06098 Brassica carinata HOM05D004971 ORTHO05D006289 2.1e-68 263.1 241 54.4
BolC3t14306H Brassica oleracea HOM05D004971 ORTHO05D006289 2.1e-68 263.1 241 54.4
CsaV3_1G020790 Cucumis sativus L. HOM05D004971 ORTHO05D006289 3.6e-68 262.3 251 51.8
C03p19180 Brassica napus HOM05D004971 ORTHO05D006289 4.7e-68 261.9 241 53.9
CSS0049746 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 4.7e-68 261.9 196 61.7
FAN19G1252 Fragaria x ananassa HOM05D001382 ORTHO05D001266 1.1e-67 260.8 241 53.5
AUR62021639 Chenopodium quinoa HOM05D004971 ORTHO05D006289 2.3e-67 259.6 242 52.9
PSO541G6366 Papaver somniferum HOM05D004971 ORTHO05D006289 5.2e-67 258.5 242 54.5
TWI12G1172 Tripterygium wilfordii HOM05D004971 ORTHO05D006289 5.2e-67 258.5 241 53.9
Os08g0540500 Oryza sativa ssp. japonica HOM05D004971 ORTHO05D006289 1.2e-66 257.3 240 50.0
Cfa003218 Carpinus fangiana HOM05D001382 ORTHO05D001266 1.3e-65 253.8 212 59.0
PSO675G4950 Papaver somniferum HOM05D004971 ORTHO05D006289 1.3e-65 253.8 242 54.1
AUR62008451 Chenopodium quinoa HOM05D004971 ORTHO05D006289 2.9e-65 252.7 242 52.1
Aqoxy7G01513 Aquilegia oxysepala HOM05D004971 ORTHO05D006289 4.9e-65 251.9 242 52.9
DCAR_028679 Daucus carota HOM05D004971 ORTHO05D006289 6.4e-65 251.5 240 54.6
Lj7A659G31 Lonicera japonica HOM05D004971 ORTHO05D006289 5.4e-64 248.4 215 58.1
HPP92_012900 Vanilla planifolia HOM05D004971 ORTHO05D006289 1.6e-60 236.9 244 48.8
HPP92_012921 Vanilla planifolia HOM05D004971 ORTHO05D006289 1.6e-60 236.9 245 49.4
Sed0000382 Sechium edule HOM05D004971 ORTHO05D006289 8.9e-59 231.1 211 54.0
SHI02711 Sapria himalayana HOM05D004971 ORTHO05D006289 1.2e-58 230.7 245 47.8
MELO3C024707.2 Cucumis melo HOM05D004971 ORTHO05D006289 2.9e-57 226.1 226 48.7
Ciclev10009268m.g Citrus clementina HOM05D004971 ORTHO05D006289 1.4e-56 223.8 240 47.9
Manes.16G112100 Manihot esculenta HOM05D004971 ORTHO05D006289 9.3e-56 221.1 188 57.4
AagrBONN_evm.TU.Sc2ySwM_117.3390 Anthoceros agrestis HOM05D004971 ORTHO05D006289 1.6e-55 220.3 233 45.5
Lalb_Chr14g0371731 Lupinus albus HOM05D004971 ORTHO05D006289 3.0e-54 216.1 240 46.2
SEGI_33858 Sequoiadendron giganteum HOM05D004971 ORTHO05D006289 5.6e-53 211.8 304 39.8
Thhalv10006518m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 7.6e-50 201.4 210 50.0
Thhalv10027230m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 7.6e-50 201.4 210 50.0
SMO232G0003 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 1.9e-48 196.8 240 39.6
ATR0315G075 Amborella trichopoda HOM05D004971 ORTHO05D006289 5.4e-48 195.3 210 48.1
CDE11G0552 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 1.6e-47 193.7 240 44.2
Mapoly0002s0233 Marchantia polymorpha HOM05D004971 ORTHO05D006289 2.1e-47 193.4 267 39.0
Thhalv10026861m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 2.3e-46 189.9 210 47.1
Thhalv10027410m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 3.9e-46 189.1 210 47.1
SMO241G0030 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 3.9e-46 189.1 244 40.2
Lalb_Chr24g0397391 Lupinus albus HOM05D004971 ORTHO05D006289 1.6e-44 183.7 187 44.9
Duzib150G1337 Durio zibethinus HOM05D004971 ORTHO05D006289 2.1e-44 183.3 168 56.0
Thhalv10027350m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.1e-43 181.0 209 43.5
Nitab4.5_0002165g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.1e-43 181.0 240 41.7
Pp3c17_15270 Physcomitrium patens HOM05D004971 ORTHO05D006289 5.8e-42 175.3 248 37.5
CDE05G3470 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 2.7e-39 166.4 123 64.2
MD02G1058100 Malus domestica HOM05D004971 ORTHO05D006289 2.7e-39 166.4 240 37.1
EL10Ac8g18422 Beta vulgaris HOM05D004971 ORTHO05D006289 4.0e-35 152.5 133 57.1
MCO09G154 Micromonas commoda HOM05D004971 ORTHO05D006289 1.4e-32 144.1 263 33.8
Ca_17315_v3 Cicer arietinum L. HOM05D004971 ORTHO05D006289 1.9e-29 133.7 135 48.9
Haze_02526 Corylus avellana HOM05D004971 ORTHO05D006289 4.3e-29 132.5 126 55.6
MBI04_g02609_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D000022 1.6e-28 130.6 141 48.2
CBR_g687 Chara braunii HOM05D004971 ORTHO05D006289 3.7e-28 129.4 129 46.5
Lj4g0009518 Lotus japonicus HOM05D004971 ORTHO05D006289 2.2e-25 120.2 102 53.9
Haze_02523 Corylus avellana HOM05D004971 ORTHO05D006289 5.0e-25 119.0 115 56.5
PRCOL_00000240 Prasinoderma coloniale HOM05D004971 ORTHO05D006289 6.1e-23 112.1 280 29.3
MBI19_g42779_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 8.2e-20 101.7 168 35.7
Zm00001eb198370 Zea mays HOM05D004971 ORTHO05D006289 1.8e-19 100.5 139 41.0
MBI19_g24589_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 3.4e-18 96.3 195 33.3
Cre15.g636450 Chlamydomonas reinhardtii HOM05D004971 ORTHO05D006289 1.0e-17 94.7 106 47.2
Nitab4.5_0002165g0090 Nicotiana tabacum HOM05D004971 ORTHO05D006289 6.5e-17 92.0 57 70.2
arahy.Tifrunner.gnm1.ann1.D57MTL Arachis hypogaea HOM05D004971 ORTHO05D006289 7.2e-16 88.6 128 35.9
Nitab4.5_0001706g0070 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.2e-15 87.8 91 48.4
arahy.Tifrunner.gnm1.ann1.2J0XRF Arachis hypogaea HOM05D004971 ORTHO05D006289 2.3e-14 83.6 125 35.2
Lalb_Chr24g0397371 Lupinus albus HOM05D004971 ORTHO05D006289 3.9e-14 82.8 131 35.9
Actinidia07401 Actinidia chinensis HOM05D004971 ORTHO05D006289 1.3e-12 77.8 54 63.0
Nitab4.5_0001706g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.8e-06 57.4 29 82.8
CiPaw.05G218700 Carya illinoinensis HOM05D004971 ORTHO05D006289 8.8e-06 55.1 32 71.9


User provided reference genes

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